RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 EIF3AQ14152 1382 aaKnown RBP22.64■■□□□ 1.22
SNRNP48-203ENST00000634363 ALS2Q96Q42 1657 aa22.62■■□□□ 1.21
SNRNP48-203ENST00000634363 TULP4Q9NRJ4 1543 aa22.62■■□□□ 1.21
SNRNP48-203ENST00000634363 NRAPQ86VF7 1730 aa22.6■■□□□ 1.21
SNRNP48-203ENST00000634363 FAM182BQ5T319 152 aa22.6■■□□□ 1.21
SNRNP48-203ENST00000634363 STAC3Q96MF2 364 aa22.6■■□□□ 1.21
SNRNP48-203ENST00000634363 PRDM11Q9NQV5 511 aa22.6■■□□□ 1.21
SNRNP48-203ENST00000634363 COL14A1Q05707 1796 aaKnown RBP22.6■■□□□ 1.21
SNRNP48-203ENST00000634363 BAG6P46379 1132 aa22.59■■□□□ 1.21
SNRNP48-203ENST00000634363 NUDT16Q96DE0 195 aaKnown RBP22.59■■□□□ 1.21
SNRNP48-203ENST00000634363 NUTM2GQ5VZR2 741 aa22.57■■□□□ 1.2
SNRNP48-203ENST00000634363 SRCAPQ6ZRS2 3230 aa22.57■■□□□ 1.2
SNRNP48-203ENST00000634363 CDK19Q9BWU1 502 aa22.56■■□□□ 1.2
SNRNP48-203ENST00000634363 SPATA31A5Q5VU36 1347 aa22.56■■□□□ 1.2
SNRNP48-203ENST00000634363 SPATA31A7Q8IWB4 1347 aa22.56■■□□□ 1.2
SNRNP48-203ENST00000634363 PSDA5PKW4 1024 aaPredicted RBP22.55■■□□□ 1.2
SNRNP48-203ENST00000634363 CHRNA2Q15822 529 aa22.55■■□□□ 1.2
SNRNP48-203ENST00000634363 ARHGEF28Q8N1W1 1705 aaKnown RBP22.54■■□□□ 1.2
SNRNP48-203ENST00000634363 ZC3H6P61129 1189 aaKnown RBP22.54■■□□□ 1.2
SNRNP48-203ENST00000634363 STRN4Q9NRL3 753 aa22.54■■□□□ 1.2
SNRNP48-203ENST00000634363 ITSN1Q15811 1721 aa22.54■■□□□ 1.2
SNRNP48-203ENST00000634363 EN1Q05925 392 aaPredicted RBP22.53■■□□□ 1.2
SNRNP48-203ENST00000634363 CRYBG1Q9Y4K1 1723 aa22.52■■□□□ 1.2
SNRNP48-203ENST00000634363 KIAA0232Q92628 1395 aa22.51■■□□□ 1.19
SNRNP48-203ENST00000634363 ATP7BP35670 1465 aa22.5■■□□□ 1.19
SNRNP48-203ENST00000634363 EVA1CP58658 441 aa22.5■■□□□ 1.19
SNRNP48-203ENST00000634363 USP35Q9P2H5 1018 aa22.5■■□□□ 1.19
SNRNP48-203ENST00000634363 ACEP12821 1306 aa22.5■■□□□ 1.19
SNRNP48-203ENST00000634363 NBPF8Q3BBV2 869 aa22.49■■□□□ 1.19
SNRNP48-203ENST00000634363 CCDC61Q9Y6R9 512 aa22.48■■□□□ 1.19
SNRNP48-203ENST00000634363 RGPD1P0DJD0 1748 aa22.47■■□□□ 1.19
SNRNP48-203ENST00000634363 SPATA31A1Q5TZJ5 1347 aa22.47■■□□□ 1.19
SNRNP48-203ENST00000634363 ABTB2Q8N961 1025 aa22.46■■□□□ 1.19
SNRNP48-203ENST00000634363 NBPF1Q3BBV0 1214 aa22.45■■□□□ 1.18
SNRNP48-203ENST00000634363 PHRF1Q9P1Y6 1649 aaKnown RBP22.45■■□□□ 1.18
SNRNP48-203ENST00000634363 TRIM37O94972 964 aa22.44■■□□□ 1.18
SNRNP48-203ENST00000634363 THSD7AQ9UPZ6 1657 aa22.43■■□□□ 1.18
SNRNP48-203ENST00000634363 SRPK2P78362 688 aaKnown RBP22.43■■□□□ 1.18
SNRNP48-203ENST00000634363 R3HDM1Q15032 1099 aaKnown RBP22.43■■□□□ 1.18
SNRNP48-203ENST00000634363 EZH2Q15910 746 aaKnown RBP22.43■■□□□ 1.18
SNRNP48-203ENST00000634363 POLR3AO14802 1390 aaPredicted RBP22.42■■□□□ 1.18
SNRNP48-203ENST00000634363 PLEKHG3A1L390 1219 aa22.42■■□□□ 1.18
SNRNP48-203ENST00000634363 FAM196AQ6ZSG2 479 aa22.42■■□□□ 1.18
SNRNP48-203ENST00000634363 PDE3BQ13370 1112 aa22.41■■□□□ 1.18
SNRNP48-203ENST00000634363 LRP5O75197 1615 aa22.4■■□□□ 1.18
SNRNP48-203ENST00000634363 PCGF6Q9BYE7 350 aa22.4■■□□□ 1.18
SNRNP48-203ENST00000634363 APBA3O96018 575 aa22.39■■□□□ 1.17
SNRNP48-203ENST00000634363 LARP1Q6PKG0 1096 aaKnown RBP22.39■■□□□ 1.17
SNRNP48-203ENST00000634363 KIAA1210Q9ULL0 1709 aa22.39■■□□□ 1.17
SNRNP48-203ENST00000634363 TOPAZ1Q8N9V7 1692 aa22.39■■□□□ 1.17
SNRNP48-203ENST00000634363 TNS1Q9HBL0 1735 aaKnown RBP22.38■■□□□ 1.17
SNRNP48-203ENST00000634363 ZBTB7CA1YPR0 619 aa22.38■■□□□ 1.17
SNRNP48-203ENST00000634363 NLRP13Q86W25 1043 aa22.38■■□□□ 1.17
SNRNP48-203ENST00000634363 CABP2Q9NPB3 220 aa22.38■■□□□ 1.17
SNRNP48-203ENST00000634363 GCP02774 474 aa22.36■■□□□ 1.17
SNRNP48-203ENST00000634363 CAMKK2Q96RR4 588 aa22.36■■□□□ 1.17
SNRNP48-203ENST00000634363 SSH2Q76I76 1423 aa22.36■■□□□ 1.17
SNRNP48-203ENST00000634363 CAMTA1Q9Y6Y1 1673 aa22.36■■□□□ 1.17
SNRNP48-203ENST00000634363 CENPJQ9HC77 1338 aaPredicted RBP22.35■■□□□ 1.17
SNRNP48-203ENST00000634363 PPIP5K1Q6PFW1 1433 aa22.35■■□□□ 1.17
SNRNP48-203ENST00000634363 BARGINQ6ZT62 677 aa22.35■■□□□ 1.17
SNRNP48-203ENST00000634363 TCP11L2Q8N4U5 519 aa22.35■■□□□ 1.17
SNRNP48-203ENST00000634363 DISP2A7MBM2 1401 aa22.33■■□□□ 1.17
SNRNP48-203ENST00000634363 NRKQ7Z2Y5 1582 aa22.33■■□□□ 1.16
SNRNP48-203ENST00000634363 CABP1Q9NZU7 370 aa22.32■■□□□ 1.16
SNRNP48-203ENST00000634363 CPDO75976 1380 aa22.31■■□□□ 1.16
SNRNP48-203ENST00000634363 NLRP6P59044 892 aa22.31■■□□□ 1.16
SNRNP48-203ENST00000634363 USP19O94966 1318 aa22.31■■□□□ 1.16
SNRNP48-203ENST00000634363 THRAP3Q9Y2W1 955 aaKnown RBP22.29■■□□□ 1.16
SNRNP48-203ENST00000634363 LMO7Q8WWI1 1683 aa22.28■■□□□ 1.16
SNRNP48-203ENST00000634363 QRICH2Q9H0J4 1663 aa22.28■■□□□ 1.16
SNRNP48-203ENST00000634363 NBPF14Q5TI25 921 aa22.26■■□□□ 1.15
SNRNP48-203ENST00000634363 L3MBTL2Q969R5 705 aa22.26■■□□□ 1.15
SNRNP48-203ENST00000634363 PARD3Q8TEW0 1356 aa22.25■■□□□ 1.15
SNRNP48-203ENST00000634363 COL5A2P05997 1499 aaPredicted RBP22.24■■□□□ 1.15
SNRNP48-203ENST00000634363 TOM1L2Q6ZVM7 507 aa22.24■■□□□ 1.15
SNRNP48-203ENST00000634363 USP6P35125 1406 aa22.23■■□□□ 1.15
SNRNP48-203ENST00000634363 EVC2Q86UK5 1308 aa22.23■■□□□ 1.15
SNRNP48-203ENST00000634363 BRD4O60885 1362 aaPredicted RBP22.23■■□□□ 1.15
SNRNP48-203ENST00000634363 CRB1P82279 1406 aa22.23■■□□□ 1.15
SNRNP48-203ENST00000634363 NEUROD1Q13562 356 aa22.22■■□□□ 1.15
SNRNP48-203ENST00000634363 SIN3AQ96ST3 1273 aa22.22■■□□□ 1.15
SNRNP48-203ENST00000634363 SOX12O15370 315 aa22.21■■□□□ 1.15
SNRNP48-203ENST00000634363 RREB1Q92766 1687 aa22.2■■□□□ 1.14
SNRNP48-203ENST00000634363 PARP4Q9UKK3 1724 aaKnown RBP22.2■■□□□ 1.14
SNRNP48-203ENST00000634363 DDB1Q16531 1140 aa22.19■■□□□ 1.14
SNRNP48-203ENST00000634363 AATKQ6ZMQ8 1374 aa22.19■■□□□ 1.14
SNRNP48-203ENST00000634363 NUP188Q5SRE5 1749 aa22.19■■□□□ 1.14
SNRNP48-203ENST00000634363 AXIN2Q9Y2T1 843 aa22.18■■□□□ 1.14
SNRNP48-203ENST00000634363 C11orf95C9JLR9 678 aaPredicted RBP22.17■■□□□ 1.14
SNRNP48-203ENST00000634363 ZNF692Q9BU19 519 aaPredicted RBP22.16■■□□□ 1.14
SNRNP48-203ENST00000634363 SLIT3O75094 1523 aa22.16■■□□□ 1.14
SNRNP48-203ENST00000634363 OVOS2A0A0G2JMS6 1433 aa22.15■■□□□ 1.14
SNRNP48-203ENST00000634363 OVOS2A0A0J9YW53 1432 aa22.15■■□□□ 1.14
SNRNP48-203ENST00000634363 OVOS2Q6IE36 1432 aa22.15■■□□□ 1.14
SNRNP48-203ENST00000634363 PIK3C2AO00443 1686 aa22.15■■□□□ 1.14
SNRNP48-203ENST00000634363 CSB-PGBD3P0DP91 1061 aa22.15■■□□□ 1.14
SNRNP48-203ENST00000634363 RGPD5Q99666 1765 aa22.15■■□□□ 1.14
SNRNP48-203ENST00000634363 ROCK2O75116 1388 aaKnown RBP22.14■■□□□ 1.14
SNRNP48-203ENST00000634363 TRPM1Q7Z4N2 1603 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms