RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-208ENST00000634348 KIF3CO14782 793 aa13.5□□□□□ -0.25
SRSF4-208ENST00000634348 SMC2O95347 1197 aa13.49□□□□□ -0.25
SRSF4-208ENST00000634348 AIMP1Q12904 312 aaKnown RBP13.49□□□□□ -0.25
SRSF4-208ENST00000634348 DZIP1Q86YF9 867 aaKnown RBP13.49□□□□□ -0.25
SRSF4-208ENST00000634348 ZKSCAN1P17029 563 aaPredicted RBP13.49□□□□□ -0.25
SRSF4-208ENST00000634348 RRP1P56182 461 aaKnown RBP13.49□□□□□ -0.25
SRSF4-208ENST00000634348 CCDC27Q2M243 656 aa13.49□□□□□ -0.25
SRSF4-208ENST00000634348 RNF187Q5TA31 235 aaPredicted RBP13.49□□□□□ -0.25
SRSF4-208ENST00000634348 NOL10Q9BSC4 688 aaKnown RBP13.49□□□□□ -0.25
SRSF4-208ENST00000634348 TSPY26PQ9H489 355 aa13.49□□□□□ -0.25
SRSF4-208ENST00000634348 CUX2O14529 1486 aa13.49□□□□□ -0.25
SRSF4-208ENST00000634348 ATP2B1P20020 1258 aa13.48□□□□□ -0.25
SRSF4-208ENST00000634348 FILIP1LQ4L180 1135 aa13.48□□□□□ -0.25
SRSF4-208ENST00000634348 RBM28Q9NW13 759 aaKnown RBP13.48□□□□□ -0.25
SRSF4-208ENST00000634348 CCDC43Q96MW1 224 aaKnown RBP13.48□□□□□ -0.25
SRSF4-208ENST00000634348 POLR3GO15318 223 aaPredicted RBP13.48□□□□□ -0.25
SRSF4-208ENST00000634348 TTC5Q8N0Z6 440 aa13.47□□□□□ -0.25
SRSF4-208ENST00000634348 TXLNBQ8N3L3 684 aa13.47□□□□□ -0.25
SRSF4-208ENST00000634348 FKBP5Q13451 457 aaPredicted RBP13.47□□□□□ -0.25
SRSF4-208ENST00000634348 FAM177BA6PVY3 158 aa13.47□□□□□ -0.25
SRSF4-208ENST00000634348 NEUROD6Q96NK8 337 aa13.47□□□□□ -0.25
SRSF4-208ENST00000634348 CRACR2AQ9BSW2 395 aa13.47□□□□□ -0.25
SRSF4-208ENST00000634348 LUC7LQ9NQ29 371 aaKnown RBP13.47□□□□□ -0.25
SRSF4-208ENST00000634348 TRDNQ13061 729 aa13.47□□□□□ -0.25
SRSF4-208ENST00000634348 GBP3Q9H0R5 595 aa13.47□□□□□ -0.25
SRSF4-208ENST00000634348 EIF3AQ14152 1382 aaKnown RBP13.47□□□□□ -0.25
SRSF4-208ENST00000634348 HMOX1P09601 288 aa13.47□□□□□ -0.25
SRSF4-208ENST00000634348 COG3Q96JB2 828 aa13.46□□□□□ -0.25
SRSF4-208ENST00000634348 FMNL2Q96PY5 1086 aa13.46□□□□□ -0.25
SRSF4-208ENST00000634348 SMC3Q9UQE7 1217 aa13.46□□□□□ -0.25
SRSF4-208ENST00000634348 TRAK2O60296 914 aa13.46□□□□□ -0.25
SRSF4-208ENST00000634348 NUTM2GQ5VZR2 741 aa13.46□□□□□ -0.25
SRSF4-208ENST00000634348 FEZ1Q99689 392 aa13.46□□□□□ -0.25
SRSF4-208ENST00000634348 TCHPQ9BT92 498 aa13.46□□□□□ -0.25
SRSF4-208ENST00000634348 AMOTL1Q8IY63 956 aa13.46□□□□□ -0.26
SRSF4-208ENST00000634348 REC8O95072 547 aa13.46□□□□□ -0.26
SRSF4-208ENST00000634348 PLCD3Q8N3E9 789 aa13.46□□□□□ -0.26
SRSF4-208ENST00000634348 TXLNAP40222 546 aa13.45□□□□□ -0.26
SRSF4-208ENST00000634348 NAP1L3Q99457 506 aaPredicted RBP13.45□□□□□ -0.26
SRSF4-208ENST00000634348 SPC24Q8NBT2 197 aa13.45□□□□□ -0.26
SRSF4-208ENST00000634348 ZNHIT6Q9NWK9 470 aaKnown RBP13.45□□□□□ -0.26
SRSF4-208ENST00000634348 RIPK4P57078 832 aa13.44□□□□□ -0.26
SRSF4-208ENST00000634348 CTR9Q6PD62 1173 aa13.44□□□□□ -0.26
SRSF4-208ENST00000634348 BRPF1P55201 1214 aaPredicted RBP13.44□□□□□ -0.26
SRSF4-208ENST00000634348 CCDC160A6NGH7 325 aa13.44□□□□□ -0.26
SRSF4-208ENST00000634348 MAP9Q49MG5 647 aa13.44□□□□□ -0.26
SRSF4-208ENST00000634348 RUFY2Q8WXA3 655 aa13.44□□□□□ -0.26
SRSF4-208ENST00000634348 CWC22Q9HCG8 908 aaKnown RBP13.44□□□□□ -0.26
SRSF4-208ENST00000634348 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.44□□□□□ -0.26
SRSF4-208ENST00000634348 FAM184BQ9ULE4 1060 aa13.44□□□□□ -0.26
SRSF4-208ENST00000634348 LRRFIP2Q9Y608 721 aaKnown RBP13.44□□□□□ -0.26
SRSF4-208ENST00000634348 V9GYY5 206 aaPredicted RBP13.44□□□□□ -0.26
SRSF4-208ENST00000634348 WASHC4Q2M389 1173 aa13.44□□□□□ -0.26
SRSF4-208ENST00000634348 SEPT14Q6ZU15 432 aa13.44□□□□□ -0.26
SRSF4-208ENST00000634348 EFCAB2Q5VUJ9 269 aa13.43□□□□□ -0.26
SRSF4-208ENST00000634348 CEBPZQ03701 1054 aaKnown RBP13.43□□□□□ -0.26
SRSF4-208ENST00000634348 PDE3BQ13370 1112 aa13.43□□□□□ -0.26
SRSF4-208ENST00000634348 SOGA3Q5TF21 947 aa13.43□□□□□ -0.26
SRSF4-208ENST00000634348 SYCP1Q15431 976 aa13.43□□□□□ -0.26
SRSF4-208ENST00000634348 MYBBP1AQ9BQG0 1328 aaKnown RBP13.43□□□□□ -0.26
SRSF4-208ENST00000634348 MPHOSPH10O00566 681 aaKnown RBP13.43□□□□□ -0.26
SRSF4-208ENST00000634348 UBXN4Q92575 508 aa13.43□□□□□ -0.26
SRSF4-208ENST00000634348 SDF4Q9BRK5 362 aa13.43□□□□□ -0.26
SRSF4-208ENST00000634348 MBD3O95983 291 aa13.43□□□□□ -0.26
SRSF4-208ENST00000634348 G3BP1Q13283 466 aaKnown RBP eCLIP13.43□□□□□ -0.269e-8■■□□□ 14.5
SRSF4-208ENST00000634348 GTF2F1P35269 517 aaKnown RBP eCLIP13.42□□□□□ -0.26
SRSF4-208ENST00000634348 PANK1Q8TE04 598 aa13.42□□□□□ -0.26
SRSF4-208ENST00000634348 ERICH2A1L162 156 aa13.42□□□□□ -0.26
SRSF4-208ENST00000634348 ANKRD18BA2A2Z9 1011 aa13.42□□□□□ -0.26
SRSF4-208ENST00000634348 MAGEC2Q9UBF1 373 aaPredicted RBP13.42□□□□□ -0.26
SRSF4-208ENST00000634348 ZWINTO95229 277 aa13.42□□□□□ -0.26
SRSF4-208ENST00000634348 ARID4AP29374 1257 aaPredicted RBP13.42□□□□□ -0.26
SRSF4-208ENST00000634348 MCM3P25205 808 aa13.42□□□□□ -0.26
SRSF4-208ENST00000634348 CEP83Q9Y592 693 aa13.42□□□□□ -0.26
SRSF4-208ENST00000634348 DDX46Q7L014 1031 aaKnown RBP13.41□□□□□ -0.26
SRSF4-208ENST00000634348 C6orf163Q5TEZ5 329 aa13.41□□□□□ -0.26
SRSF4-208ENST00000634348 IKQ13123 557 aaPredicted RBP13.41□□□□□ -0.26
SRSF4-208ENST00000634348 GIGYF2Q6Y7W6 1299 aaKnown RBP13.41□□□□□ -0.26
SRSF4-208ENST00000634348 RNF168Q8IYW5 571 aaPredicted RBP13.41□□□□□ -0.26
SRSF4-208ENST00000634348 ESPNB1AK53 854 aa13.41□□□□□ -0.26
SRSF4-208ENST00000634348 KIF15Q9NS87 1388 aa13.4□□□□□ -0.26
SRSF4-208ENST00000634348 ANKRD30AQ9BXX3 1397 aa13.4□□□□□ -0.26
SRSF4-208ENST00000634348 SMC1AQ14683 1233 aaKnown RBP13.4□□□□□ -0.26
SRSF4-208ENST00000634348 LRRFIP1Q32MZ4 808 aaKnown RBP13.4□□□□□ -0.26
SRSF4-208ENST00000634348 KIF7Q2M1P5 1343 aa13.4□□□□□ -0.26
SRSF4-208ENST00000634348 DZIP1LQ8IYY4 767 aaKnown RBP13.4□□□□□ -0.26
SRSF4-208ENST00000634348 MIPOL1Q8TD10 442 aa13.4□□□□□ -0.26
SRSF4-208ENST00000634348 ZMAT2Q96NC0 199 aaKnown RBP13.4□□□□□ -0.26
SRSF4-208ENST00000634348 SAFBQ15424 915 aaKnown RBP eCLIP13.39□□□□□ -0.27
SRSF4-208ENST00000634348 FAM177A1Q8N128 213 aaPredicted RBP13.39□□□□□ -0.27
SRSF4-208ENST00000634348 PPFIBP1Q86W92 1011 aa13.38□□□□□ -0.27
SRSF4-208ENST00000634348 MRVI1Q9Y6F6 885 aa13.38□□□□□ -0.27
SRSF4-208ENST00000634348 ZFYP08048 801 aaPredicted RBP13.38□□□□□ -0.27
SRSF4-208ENST00000634348 LIG1P18858 919 aa13.38□□□□□ -0.27
SRSF4-208ENST00000634348 PIP4K2AP48426 406 aaPredicted RBP13.38□□□□□ -0.27
SRSF4-208ENST00000634348 C22orf23Q9BZE7 217 aa13.38□□□□□ -0.27
SRSF4-208ENST00000634348 KINO60870 393 aaKnown RBP13.38□□□□□ -0.27
SRSF4-208ENST00000634348 SPECC1LQ69YQ0 1117 aa13.38□□□□□ -0.27
SRSF4-208ENST00000634348 RALYLQ86SE5 291 aaKnown RBP13.38□□□□□ -0.27
SRSF4-208ENST00000634348 PSME1Q06323 249 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms