RNA–Protein interactions for RNA: ENST00000629670.1

CCDC163-208, Transcript of coiled-coil domain containing 163, humanhuman

TSL 3

Gene CCDC163, Length 919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-208ENST00000629670 CCDC61Q9Y6R9 512 aa16.14■□□□□ 0.17
CCDC163-208ENST00000629670 ABCA3Q99758 1704 aa16.13■□□□□ 0.17
CCDC163-208ENST00000629670 TRPM3Q9HCF6 1732 aaPredicted RBP16.13■□□□□ 0.17
CCDC163-208ENST00000629670 EP400Q96L91 3159 aa16.13■□□□□ 0.17
CCDC163-208ENST00000629670 ATP7BP35670 1465 aa16.11■□□□□ 0.17
CCDC163-208ENST00000629670 COL14A1Q05707 1796 aaKnown RBP16.11■□□□□ 0.17
CCDC163-208ENST00000629670 BAG6P46379 1132 aa16.11■□□□□ 0.17
CCDC163-208ENST00000629670 NBPF8Q3BBV2 869 aa16.11■□□□□ 0.17
CCDC163-208ENST00000629670 DEFB132Q7Z7B7 95 aa16.11■□□□□ 0.17
CCDC163-208ENST00000629670 ACEP12821 1306 aa16.11■□□□□ 0.17
CCDC163-208ENST00000629670 SPATA31A5Q5VU36 1347 aa16.11■□□□□ 0.17
CCDC163-208ENST00000629670 SPATA31A7Q8IWB4 1347 aa16.11■□□□□ 0.17
CCDC163-208ENST00000629670 ALS2Q96Q42 1657 aa16.11■□□□□ 0.17
CCDC163-208ENST00000629670 PLEKHG3A1L390 1219 aa16.1■□□□□ 0.17
CCDC163-208ENST00000629670 SRPK2P78362 688 aaKnown RBP16.1■□□□□ 0.17
CCDC163-208ENST00000629670 ITSN1Q15811 1721 aa16.1■□□□□ 0.17
CCDC163-208ENST00000629670 ARHGEF28Q8N1W1 1705 aaKnown RBP16.1■□□□□ 0.17
CCDC163-208ENST00000629670 EVA1CP58658 441 aa16.09■□□□□ 0.17
CCDC163-208ENST00000629670 NBPF1Q3BBV0 1214 aa16.09■□□□□ 0.17
CCDC163-208ENST00000629670 CENPJQ9HC77 1338 aaPredicted RBP16.09■□□□□ 0.17
CCDC163-208ENST00000629670 ZC3H6P61129 1189 aaKnown RBP16.08■□□□□ 0.16
CCDC163-208ENST00000629670 NUTM2GQ5VZR2 741 aa16.08■□□□□ 0.16
CCDC163-208ENST00000629670 ABTB2Q8N961 1025 aa16.08■□□□□ 0.16
CCDC163-208ENST00000629670 STRN4Q9NRL3 753 aa16.08■□□□□ 0.16
CCDC163-208ENST00000629670 POLR3AO14802 1390 aaPredicted RBP16.08■□□□□ 0.16
CCDC163-208ENST00000629670 KIAA0232Q92628 1395 aa16.08■□□□□ 0.16
CCDC163-208ENST00000629670 KIAA1210Q9ULL0 1709 aa16.08■□□□□ 0.16
CCDC163-208ENST00000629670 BRWD3Q6RI45 1802 aa16.08■□□□□ 0.16
CCDC163-208ENST00000629670 CHRNA2Q15822 529 aa16.07■□□□□ 0.16
CCDC163-208ENST00000629670 NLRP13Q86W25 1043 aa16.06■□□□□ 0.16
CCDC163-208ENST00000629670 NRAPQ86VF7 1730 aa16.05■□□□□ 0.16
CCDC163-208ENST00000629670 SPATA31A1Q5TZJ5 1347 aa16.04■□□□□ 0.16
CCDC163-208ENST00000629670 BRD4O60885 1362 aaPredicted RBP16.03■□□□□ 0.16
CCDC163-208ENST00000629670 CABP2Q9NPB3 220 aa16.03■□□□□ 0.16
CCDC163-208ENST00000629670 SRCAPQ6ZRS2 3230 aa16.03■□□□□ 0.16
CCDC163-208ENST00000629670 PPIP5K1Q6PFW1 1433 aa16.02■□□□□ 0.16
CCDC163-208ENST00000629670 PDE3BQ13370 1112 aa16.02■□□□□ 0.16
CCDC163-208ENST00000629670 FAM196AQ6ZSG2 479 aa16.02■□□□□ 0.16
CCDC163-208ENST00000629670 L3MBTL2Q969R5 705 aa16.02■□□□□ 0.16
CCDC163-208ENST00000629670 USP35Q9P2H5 1018 aa16.02■□□□□ 0.16
CCDC163-208ENST00000629670 FAM182BQ5T319 152 aa16.01■□□□□ 0.15
CCDC163-208ENST00000629670 EVC2Q86UK5 1308 aa16■□□□□ 0.15
CCDC163-208ENST00000629670 CRYBG1Q9Y4K1 1723 aa16■□□□□ 0.15
CCDC163-208ENST00000629670 GCP02774 474 aa16■□□□□ 0.15
CCDC163-208ENST00000629670 EN1Q05925 392 aaPredicted RBP16■□□□□ 0.15
CCDC163-208ENST00000629670 BARGINQ6ZT62 677 aa16■□□□□ 0.15
CCDC163-208ENST00000629670 CABP1Q9NZU7 370 aa16■□□□□ 0.15
CCDC163-208ENST00000629670 CPDO75976 1380 aa16■□□□□ 0.15
CCDC163-208ENST00000629670 TOPAZ1Q8N9V7 1692 aa15.99■□□□□ 0.15
CCDC163-208ENST00000629670 NEUROD1Q13562 356 aa15.99■□□□□ 0.15
CCDC163-208ENST00000629670 TCP11L2Q8N4U5 519 aa15.99■□□□□ 0.15
CCDC163-208ENST00000629670 USP19O94966 1318 aa15.98■□□□□ 0.15
CCDC163-208ENST00000629670 PHRF1Q9P1Y6 1649 aaKnown RBP15.98■□□□□ 0.15
CCDC163-208ENST00000629670 NLRP6P59044 892 aa15.98■□□□□ 0.15
CCDC163-208ENST00000629670 SSH2Q76I76 1423 aa15.98■□□□□ 0.15
CCDC163-208ENST00000629670 THRAP3Q9Y2W1 955 aaKnown RBP15.98■□□□□ 0.15
CCDC163-208ENST00000629670 ZBTB7CA1YPR0 619 aa15.97■□□□□ 0.15
CCDC163-208ENST00000629670 PSDA5PKW4 1024 aaPredicted RBP15.97■□□□□ 0.15
CCDC163-208ENST00000629670 LARP1Q6PKG0 1096 aaKnown RBP15.97■□□□□ 0.15
CCDC163-208ENST00000629670 THSD7AQ9UPZ6 1657 aa15.96■□□□□ 0.15
CCDC163-208ENST00000629670 TRIM37O94972 964 aa15.96■□□□□ 0.15
CCDC163-208ENST00000629670 SIN3AQ96ST3 1273 aa15.96■□□□□ 0.15
CCDC163-208ENST00000629670 ZNF692Q9BU19 519 aaPredicted RBP15.96■□□□□ 0.15
CCDC163-208ENST00000629670 ROCK2O75116 1388 aaKnown RBP15.96■□□□□ 0.15
CCDC163-208ENST00000629670 RGPD1P0DJD0 1748 aa15.95■□□□□ 0.14
CCDC163-208ENST00000629670 C11orf95C9JLR9 678 aaPredicted RBP15.95■□□□□ 0.14
CCDC163-208ENST00000629670 APBA3O96018 575 aa15.95■□□□□ 0.14
CCDC163-208ENST00000629670 USP6P35125 1406 aa15.94■□□□□ 0.14
CCDC163-208ENST00000629670 NRKQ7Z2Y5 1582 aa15.94■□□□□ 0.14
CCDC163-208ENST00000629670 DISP2A7MBM2 1401 aa15.94■□□□□ 0.14
CCDC163-208ENST00000629670 QRICH2Q9H0J4 1663 aa15.93■□□□□ 0.14
CCDC163-208ENST00000629670 CAMTA1Q9Y6Y1 1673 aa15.93■□□□□ 0.14
CCDC163-208ENST00000629670 EZH2Q15910 746 aaKnown RBP15.93■□□□□ 0.14
CCDC163-208ENST00000629670 PARD3Q8TEW0 1356 aa15.92■□□□□ 0.14
CCDC163-208ENST00000629670 R3HDM1Q15032 1099 aaKnown RBP15.92■□□□□ 0.14
CCDC163-208ENST00000629670 AATKQ6ZMQ8 1374 aa15.91■□□□□ 0.14
CCDC163-208ENST00000629670 KCNH5Q8NCM2 988 aa15.91■□□□□ 0.14
CCDC163-208ENST00000629670 NBPF14Q5TI25 921 aa15.9■□□□□ 0.14
CCDC163-208ENST00000629670 TOM1L2Q6ZVM7 507 aa15.9■□□□□ 0.14
CCDC163-208ENST00000629670 CAMKK2Q96RR4 588 aa15.9■□□□□ 0.14
CCDC163-208ENST00000629670 CRB1P82279 1406 aa15.9■□□□□ 0.14
CCDC163-208ENST00000629670 COL5A2P05997 1499 aaPredicted RBP15.89■□□□□ 0.13
CCDC163-208ENST00000629670 TTC21BQ7Z4L5 1316 aa15.89■□□□□ 0.13
CCDC163-208ENST00000629670 TTC21AQ8NDW8 1320 aa15.89■□□□□ 0.13
CCDC163-208ENST00000629670 LMO7Q8WWI1 1683 aa15.88■□□□□ 0.13
CCDC163-208ENST00000629670 TRPM1Q7Z4N2 1603 aa15.87■□□□□ 0.13
CCDC163-208ENST00000629670 CSB-PGBD3P0DP91 1061 aa15.87■□□□□ 0.13
CCDC163-208ENST00000629670 DDB1Q16531 1140 aa15.87■□□□□ 0.13
CCDC163-208ENST00000629670 CDCA7Q9BWT1 371 aaPredicted RBP15.87■□□□□ 0.13
CCDC163-208ENST00000629670 LRP5O75197 1615 aa15.86■□□□□ 0.13
CCDC163-208ENST00000629670 SOX12O15370 315 aa15.86■□□□□ 0.13
CCDC163-208ENST00000629670 CARD11Q9BXL7 1154 aa15.86■□□□□ 0.13
CCDC163-208ENST00000629670 KTN1Q86UP2 1357 aaKnown RBP15.86■□□□□ 0.13
CCDC163-208ENST00000629670 SLIT3O75094 1523 aa15.85■□□□□ 0.13
CCDC163-208ENST00000629670 WDR17Q8IZU2 1322 aa15.85■□□□□ 0.13
CCDC163-208ENST00000629670 TNS1Q9HBL0 1735 aaKnown RBP15.85■□□□□ 0.13
CCDC163-208ENST00000629670 ARHGEF25Q86VW2 580 aa15.84■□□□□ 0.13
CCDC163-208ENST00000629670 OVOS2A0A0G2JMS6 1433 aa15.84■□□□□ 0.13
CCDC163-208ENST00000629670 OVOS2A0A0J9YW53 1432 aa15.84■□□□□ 0.13
CCDC163-208ENST00000629670 OVOS2Q6IE36 1432 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms