RNA–Protein interactions for RNA: ENST00000628734.1

UBE2A-208, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 2

Gene UBE2A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-208ENST00000628734 IRS1P35568 1242 aa8.73□□□□□ -1.01
UBE2A-208ENST00000628734 UNC93B1Q9H1C4 597 aa8.73□□□□□ -1.01
UBE2A-208ENST00000628734 RETREG3Q86VR2 466 aa8.72□□□□□ -1.01
UBE2A-208ENST00000628734 ZFAND3Q9H8U3 227 aa8.72□□□□□ -1.01
UBE2A-208ENST00000628734 DNMT3AQ9Y6K1 912 aaPredicted RBP8.72□□□□□ -1.01
UBE2A-208ENST00000628734 ZNF385CQ66K41 422 aaPredicted RBP8.71□□□□□ -1.02
UBE2A-208ENST00000628734 TULP1O00294 542 aaPredicted RBP8.7□□□□□ -1.02
UBE2A-208ENST00000628734 MS4A1P11836 297 aa8.7□□□□□ -1.02
UBE2A-208ENST00000628734 VARSP26640 1264 aaKnown RBP8.7□□□□□ -1.02
UBE2A-208ENST00000628734 MAP2K5Q13163 448 aa8.7□□□□□ -1.02
UBE2A-208ENST00000628734 ZNF511Q8NB15 262 aa8.7□□□□□ -1.02
UBE2A-208ENST00000628734 IRF6O14896 467 aa8.69□□□□□ -1.02
UBE2A-208ENST00000628734 ZIC2O95409 532 aaPredicted RBP8.69□□□□□ -1.02
UBE2A-208ENST00000628734 SVOPQ8N4V2 548 aa8.69□□□□□ -1.02
UBE2A-208ENST00000628734 IGHA1P01876 353 aa8.68□□□□□ -1.02
UBE2A-208ENST00000628734 MDM2Q00987 491 aaPredicted RBP8.68□□□□□ -1.02
UBE2A-208ENST00000628734 MPNDQ8N594 471 aa8.68□□□□□ -1.02
UBE2A-208ENST00000628734 WHAMMQ8TF30 809 aa8.68□□□□□ -1.02
UBE2A-208ENST00000628734 ITPKCQ96DU7 683 aa8.68□□□□□ -1.02
UBE2A-208ENST00000628734 COL25A1Q9BXS0 654 aaPredicted RBP8.68□□□□□ -1.02
UBE2A-208ENST00000628734 DNMT3LQ9UJW3 386 aa8.68□□□□□ -1.02
UBE2A-208ENST00000628734 BMP2P12643 396 aa8.67□□□□□ -1.02
UBE2A-208ENST00000628734 EVA1BQ9NVM1 165 aa8.67□□□□□ -1.02
UBE2A-208ENST00000628734 C6orf229H3BNL8 230 aa8.65□□□□□ -1.02
UBE2A-208ENST00000628734 NR3C2P08235 984 aa8.65□□□□□ -1.02
UBE2A-208ENST00000628734 ARID5BQ14865 1188 aa8.65□□□□□ -1.02
UBE2A-208ENST00000628734 RNFT1Q5M7Z0 435 aa8.65□□□□□ -1.02
UBE2A-208ENST00000628734 PCDHGC3Q9UN70 934 aa8.65□□□□□ -1.02
UBE2A-208ENST00000628734 MINK1Q8N4C8 1332 aaPredicted RBP8.64□□□□□ -1.03
UBE2A-208ENST00000628734 KCNH2Q12809 1159 aa8.64□□□□□ -1.03
UBE2A-208ENST00000628734 PTPRNQ16849 979 aa8.64□□□□□ -1.03
UBE2A-208ENST00000628734 LINC00528Q8N1L1 170 aa8.64□□□□□ -1.03
UBE2A-208ENST00000628734 SOS2Q07890 1332 aaPredicted RBP8.63□□□□□ -1.03
UBE2A-208ENST00000628734 ARHGEF15O94989 841 aa8.63□□□□□ -1.03
UBE2A-208ENST00000628734 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.63□□□□□ -1.03
UBE2A-208ENST00000628734 KRTAP4-8Q9BYQ9 185 aa8.63□□□□□ -1.03
UBE2A-208ENST00000628734 FAM174AQ8TBP5 190 aa8.62□□□□□ -1.03
UBE2A-208ENST00000628734 UPP2O95045 317 aa8.61□□□□□ -1.03
UBE2A-208ENST00000628734 FDX1P10109 184 aa8.61□□□□□ -1.03
UBE2A-208ENST00000628734 FOXK2Q01167 660 aa8.61□□□□□ -1.03
UBE2A-208ENST00000628734 CCDC102AQ96A19 550 aa8.61□□□□□ -1.03
UBE2A-208ENST00000628734 MARSP56192 900 aaKnown RBP8.6□□□□□ -1.03
UBE2A-208ENST00000628734 PTSQ03393 145 aa8.6□□□□□ -1.03
UBE2A-208ENST00000628734 NUTM1Q86Y26 1132 aa8.6□□□□□ -1.03
UBE2A-208ENST00000628734 MEIOBQ8N635 442 aa8.6□□□□□ -1.03
UBE2A-208ENST00000628734 CDK15Q96Q40 435 aa8.6□□□□□ -1.03
UBE2A-208ENST00000628734 ADAM23O75077 832 aa8.59□□□□□ -1.03
UBE2A-208ENST00000628734 KANK3Q6NY19 840 aa8.59□□□□□ -1.03
UBE2A-208ENST00000628734 FOXJ1Q92949 421 aa8.59□□□□□ -1.03
UBE2A-208ENST00000628734 SLURP2P0DP57 97 aa8.57□□□□□ -1.04
UBE2A-208ENST00000628734 GRM5P41594 1212 aa8.57□□□□□ -1.04
UBE2A-208ENST00000628734 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.57□□□□□ -1.04
UBE2A-208ENST00000628734 NR5A1Q13285 461 aa8.56□□□□□ -1.04
UBE2A-208ENST00000628734 PRR7Q8TB68 274 aa8.56□□□□□ -1.04
UBE2A-208ENST00000628734 NANOS1Q8WY41 292 aaKnown RBP8.56□□□□□ -1.04
UBE2A-208ENST00000628734 FAM217BQ9NTX9 383 aaPredicted RBP8.56□□□□□ -1.04
UBE2A-208ENST00000628734 FIGNL2A6NMB9 653 aa8.55□□□□□ -1.04
UBE2A-208ENST00000628734 CTHP32929 405 aa8.55□□□□□ -1.04
UBE2A-208ENST00000628734 CCDC155Q8N6L0 562 aa8.55□□□□□ -1.04
UBE2A-208ENST00000628734 SCARF2Q96GP6 870 aaPredicted RBP8.55□□□□□ -1.04
UBE2A-208ENST00000628734 GPCPD1Q9NPB8 672 aa8.55□□□□□ -1.04
UBE2A-208ENST00000628734 TTLL8A6PVC2 850 aa8.54□□□□□ -1.04
UBE2A-208ENST00000628734 CLCN1P35523 988 aa8.54□□□□□ -1.04
UBE2A-208ENST00000628734 C4orf48Q5BLP8 95 aa8.54□□□□□ -1.04
UBE2A-208ENST00000628734 MSTNO14793 375 aa8.53□□□□□ -1.04
UBE2A-208ENST00000628734 SPTLC1O15269 473 aa8.53□□□□□ -1.04
UBE2A-208ENST00000628734 NDUFV2P19404 249 aa8.53□□□□□ -1.04
UBE2A-208ENST00000628734 PLA2G4EQ3MJ16 856 aa8.53□□□□□ -1.04
UBE2A-208ENST00000628734 VWA5B2Q8N398 1253 aa8.53□□□□□ -1.04
UBE2A-208ENST00000628734 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.52□□□□□ -1.05
UBE2A-208ENST00000628734 ZMYND10O75800 440 aa8.52□□□□□ -1.05
UBE2A-208ENST00000628734 BARGINQ6ZT62 677 aa8.52□□□□□ -1.05
UBE2A-208ENST00000628734 SPOCK3Q9BQ16 436 aa8.52□□□□□ -1.05
UBE2A-208ENST00000628734 CDC14CA4D256 554 aa8.51□□□□□ -1.05
UBE2A-208ENST00000628734 ITGB2P05107 769 aa8.51□□□□□ -1.05
UBE2A-208ENST00000628734 AGERQ15109 404 aa8.51□□□□□ -1.05
UBE2A-208ENST00000628734 LYPD4Q6UWN0 246 aa8.51□□□□□ -1.05
UBE2A-208ENST00000628734 TSEN34Q9BSV6 310 aaKnown RBP8.51□□□□□ -1.05
UBE2A-208ENST00000628734 KRTAP9-2Q9BYQ4 174 aa8.5□□□□□ -1.05
UBE2A-208ENST00000628734 MAP10Q9P2G4 905 aa8.5□□□□□ -1.05
UBE2A-208ENST00000628734 FSHRP23945 695 aa8.49□□□□□ -1.05
UBE2A-208ENST00000628734 ZC3H15Q8WU90 426 aaKnown RBP8.49□□□□□ -1.05
UBE2A-208ENST00000628734 MOXD2PA6NHM9 499 aa8.48□□□□□ -1.05
UBE2A-208ENST00000628734 ADAMTS2O95450 1211 aa8.48□□□□□ -1.05
UBE2A-208ENST00000628734 ITGA6P23229 1130 aa8.48□□□□□ -1.05
UBE2A-208ENST00000628734 MTMR2Q13614 643 aa8.48□□□□□ -1.05
UBE2A-208ENST00000628734 DESI1Q6ICB0 168 aa8.48□□□□□ -1.05
UBE2A-208ENST00000628734 SPIRE2Q8WWL2 714 aa8.48□□□□□ -1.05
UBE2A-208ENST00000628734 PSMG3-AS1Q96PY0 264 aa8.48□□□□□ -1.05
UBE2A-208ENST00000628734 SLC35F4A4IF30 521 aa8.47□□□□□ -1.05
UBE2A-208ENST00000628734 SSTR3P32745 418 aaPredicted RBP8.47□□□□□ -1.05
UBE2A-208ENST00000628734 AMHR2Q16671 573 aa8.47□□□□□ -1.05
UBE2A-208ENST00000628734 SV2AQ7L0J3 742 aa8.47□□□□□ -1.05
UBE2A-208ENST00000628734 DCAF5Q96JK2 942 aa8.47□□□□□ -1.05
UBE2A-208ENST00000628734 KRTAP9-6A0A140TA67 174 aa8.46□□□□□ -1.06
UBE2A-208ENST00000628734 PROCP04070 461 aa8.46□□□□□ -1.06
UBE2A-208ENST00000628734 LYPD8Q6UX82 237 aa8.46□□□□□ -1.06
UBE2A-208ENST00000628734 MAP3K10Q02779 954 aa8.45□□□□□ -1.06
UBE2A-208ENST00000628734 CNTNAP5Q8WYK1 1306 aa8.45□□□□□ -1.06
UBE2A-208ENST00000628734 CELA2BP08218 269 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms