RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 POLR3AO14802 1390 aaPredicted RBP22.61■■□□□ 1.21
CHRNA4-211ENST00000628606 PPIP5K1Q6PFW1 1433 aa22.6■■□□□ 1.21
CHRNA4-211ENST00000628606 SLIT2O94813 1529 aa22.58■■□□□ 1.21
CHRNA4-211ENST00000628606 ABCA3Q99758 1704 aa22.58■■□□□ 1.21
CHRNA4-211ENST00000628606 GJD4Q96KN9 370 aaPredicted RBP22.58■■□□□ 1.21
CHRNA4-211ENST00000628606 RGS12O14924 1447 aa22.57■■□□□ 1.2
CHRNA4-211ENST00000628606 PCGF6Q9BYE7 350 aa22.57■■□□□ 1.2
CHRNA4-211ENST00000628606 CABP1Q9NZU7 370 aa22.57■■□□□ 1.2
CHRNA4-211ENST00000628606 ABTB2Q8N961 1025 aa22.56■■□□□ 1.2
CHRNA4-211ENST00000628606 CCDC9Q9Y3X0 531 aaKnown RBP22.56■■□□□ 1.2
CHRNA4-211ENST00000628606 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.56■■□□□ 1.2
CHRNA4-211ENST00000628606 FAM83GA6ND36 823 aa22.55■■□□□ 1.2
CHRNA4-211ENST00000628606 NUTM2GQ5VZR2 741 aa22.55■■□□□ 1.2
CHRNA4-211ENST00000628606 RALGAPBQ86X10 1494 aa22.54■■□□□ 1.2
CHRNA4-211ENST00000628606 UPF1Q92900 1129 aaKnown RBP eCLIP22.53■■□□□ 1.2
CHRNA4-211ENST00000628606 PRDM11Q9NQV5 511 aa22.53■■□□□ 1.2
CHRNA4-211ENST00000628606 NWD2Q9ULI1 1742 aa22.53■■□□□ 1.2
CHRNA4-211ENST00000628606 BRD4O60885 1362 aaPredicted RBP22.52■■□□□ 1.2
CHRNA4-211ENST00000628606 PLCH1Q4KWH8 1693 aa22.52■■□□□ 1.2
CHRNA4-211ENST00000628606 VPS72Q15906 364 aa22.51■■□□□ 1.19
CHRNA4-211ENST00000628606 NLRP13Q86W25 1043 aa22.51■■□□□ 1.19
CHRNA4-211ENST00000628606 BTG4Q9NY30 223 aa22.51■■□□□ 1.19
CHRNA4-211ENST00000628606 ATAD2Q6PL18 1390 aa22.5■■□□□ 1.19
CHRNA4-211ENST00000628606 SBNO2Q9Y2G9 1366 aa22.5■■□□□ 1.19
CHRNA4-211ENST00000628606 COL14A1Q05707 1796 aaKnown RBP22.49■■□□□ 1.19
CHRNA4-211ENST00000628606 ZNF692Q9BU19 519 aaPredicted RBP22.49■■□□□ 1.19
CHRNA4-211ENST00000628606 CLSPNQ9HAW4 1339 aa22.48■■□□□ 1.19
CHRNA4-211ENST00000628606 ZC3H6P61129 1189 aaKnown RBP22.47■■□□□ 1.19
CHRNA4-211ENST00000628606 USP6P35125 1406 aa22.47■■□□□ 1.19
CHRNA4-211ENST00000628606 CRYBG1Q9Y4K1 1723 aa22.46■■□□□ 1.19
CHRNA4-211ENST00000628606 KIAA0232Q92628 1395 aa22.46■■□□□ 1.19
CHRNA4-211ENST00000628606 SLC24A1O60721 1099 aa22.45■■□□□ 1.18
CHRNA4-211ENST00000628606 TIMELESSQ9UNS1 1208 aa22.45■■□□□ 1.18
CHRNA4-211ENST00000628606 A0A0G2JS52 829 aa22.44■■□□□ 1.18
CHRNA4-211ENST00000628606 NLRP6P59044 892 aa22.44■■□□□ 1.18
CHRNA4-211ENST00000628606 MYT1Q01538 1121 aa22.44■■□□□ 1.18
CHRNA4-211ENST00000628606 PHRF1Q9P1Y6 1649 aaKnown RBP22.44■■□□□ 1.18
CHRNA4-211ENST00000628606 GLI3P10071 1580 aa22.43■■□□□ 1.18
CHRNA4-211ENST00000628606 CHRNA2Q15822 529 aa22.43■■□□□ 1.18
CHRNA4-211ENST00000628606 SEPT12Q8IYM1 358 aa22.42■■□□□ 1.18
CHRNA4-211ENST00000628606 TMC1Q8TDI8 760 aa22.42■■□□□ 1.18
CHRNA4-211ENST00000628606 USP19O94966 1318 aa22.41■■□□□ 1.18
CHRNA4-211ENST00000628606 GCP02774 474 aa22.41■■□□□ 1.18
CHRNA4-211ENST00000628606 EVA1CP58658 441 aa22.41■■□□□ 1.18
CHRNA4-211ENST00000628606 ST20-MTHFSA0A0A6YYL1 179 aa22.4■■□□□ 1.18
CHRNA4-211ENST00000628606 STRN4Q9NRL3 753 aa22.4■■□□□ 1.18
CHRNA4-211ENST00000628606 NRAPQ86VF7 1730 aa22.4■■□□□ 1.18
CHRNA4-211ENST00000628606 KTN1Q86UP2 1357 aaKnown RBP22.39■■□□□ 1.18
CHRNA4-211ENST00000628606 CCER1Q8TC90 406 aaPredicted RBP22.39■■□□□ 1.17
CHRNA4-211ENST00000628606 TTC21BQ7Z4L5 1316 aa22.38■■□□□ 1.17
CHRNA4-211ENST00000628606 TTC21AQ8NDW8 1320 aa22.38■■□□□ 1.17
CHRNA4-211ENST00000628606 ONECUT3O60422 494 aaPredicted RBP22.38■■□□□ 1.17
CHRNA4-211ENST00000628606 FAM98CQ17RN3 349 aaKnown RBP22.38■■□□□ 1.17
CHRNA4-211ENST00000628606 HDGFL2Q7Z4V5 671 aaPredicted RBP22.38■■□□□ 1.17
CHRNA4-211ENST00000628606 PUS7Q96PZ0 661 aaKnown RBP22.38■■□□□ 1.17
CHRNA4-211ENST00000628606 AKAP12Q02952 1782 aa22.38■■□□□ 1.17
CHRNA4-211ENST00000628606 ZBTB7CA1YPR0 619 aa22.37■■□□□ 1.17
CHRNA4-211ENST00000628606 CPDO75976 1380 aa22.37■■□□□ 1.17
CHRNA4-211ENST00000628606 SPATA31A5Q5VU36 1347 aa22.36■■□□□ 1.17
CHRNA4-211ENST00000628606 SPATA31A7Q8IWB4 1347 aa22.36■■□□□ 1.17
CHRNA4-211ENST00000628606 TERF2IPQ9NYB0 399 aa22.36■■□□□ 1.17
CHRNA4-211ENST00000628606 SSH2Q76I76 1423 aa22.36■■□□□ 1.17
CHRNA4-211ENST00000628606 NRKQ7Z2Y5 1582 aa22.36■■□□□ 1.17
CHRNA4-211ENST00000628606 CPSF1Q10570 1443 aaKnown RBP22.35■■□□□ 1.17
CHRNA4-211ENST00000628606 CCDC125Q86Z20 511 aa22.35■■□□□ 1.17
CHRNA4-211ENST00000628606 KRT27Q7Z3Y8 459 aa22.34■■□□□ 1.17
CHRNA4-211ENST00000628606 KCNH5Q8NCM2 988 aa22.34■■□□□ 1.17
CHRNA4-211ENST00000628606 SLC12A5Q9H2X9 1139 aa22.34■■□□□ 1.17
CHRNA4-211ENST00000628606 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.33■■□□□ 1.17
CHRNA4-211ENST00000628606 TESK2Q96S53 571 aa22.33■■□□□ 1.17
CHRNA4-211ENST00000628606 USP47Q96K76 1375 aa22.33■■□□□ 1.17
CHRNA4-211ENST00000628606 BRWD3Q6RI45 1802 aa22.33■■□□□ 1.16
CHRNA4-211ENST00000628606 PIK3C2AO00443 1686 aa22.32■■□□□ 1.16
CHRNA4-211ENST00000628606 TMF1P82094 1093 aa22.31■■□□□ 1.16
CHRNA4-211ENST00000628606 USP35Q9P2H5 1018 aa22.31■■□□□ 1.16
CHRNA4-211ENST00000628606 SPATA31A1Q5TZJ5 1347 aa22.31■■□□□ 1.16
CHRNA4-211ENST00000628606 EP400Q96L91 3159 aa22.3■■□□□ 1.16
CHRNA4-211ENST00000628606 MON2Q7Z3U7 1717 aa22.29■■□□□ 1.16
CHRNA4-211ENST00000628606 NINLQ9Y2I6 1382 aa22.29■■□□□ 1.16
CHRNA4-211ENST00000628606 SOX12O15370 315 aa22.29■■□□□ 1.16
CHRNA4-211ENST00000628606 SF3B2Q13435 895 aaKnown RBP22.29■■□□□ 1.16
CHRNA4-211ENST00000628606 SLIT3O75094 1523 aa22.29■■□□□ 1.16
CHRNA4-211ENST00000628606 CAMTA1Q9Y6Y1 1673 aa22.28■■□□□ 1.16
CHRNA4-211ENST00000628606 CDCA8Q53HL2 280 aa22.28■■□□□ 1.16
CHRNA4-211ENST00000628606 AATKQ6ZMQ8 1374 aa22.27■■□□□ 1.16
CHRNA4-211ENST00000628606 LARP1Q6PKG0 1096 aaKnown RBP22.27■■□□□ 1.16
CHRNA4-211ENST00000628606 EDC4Q6P2E9 1401 aaKnown RBP22.26■■□□□ 1.15
CHRNA4-211ENST00000628606 LMO7Q8WWI1 1683 aa22.26■■□□□ 1.15
CHRNA4-211ENST00000628606 TCP11L2Q8N4U5 519 aa22.25■■□□□ 1.15
CHRNA4-211ENST00000628606 CD163L1Q9NR16 1453 aa22.25■■□□□ 1.15
CHRNA4-211ENST00000628606 A0A1W2PP64 1363 aa22.25■■□□□ 1.15
CHRNA4-211ENST00000628606 NME9Q86XW9 330 aa22.24■■□□□ 1.15
CHRNA4-211ENST00000628606 THRAP3Q9Y2W1 955 aaKnown RBP22.24■■□□□ 1.15
CHRNA4-211ENST00000628606 BLMP54132 1417 aaPredicted RBP22.23■■□□□ 1.15
CHRNA4-211ENST00000628606 BARGINQ6ZT62 677 aa22.23■■□□□ 1.15
CHRNA4-211ENST00000628606 ARHGEF25Q86VW2 580 aa22.23■■□□□ 1.15
CHRNA4-211ENST00000628606 COL5A2P05997 1499 aaPredicted RBP22.22■■□□□ 1.15
CHRNA4-211ENST00000628606 USP31Q70CQ4 1352 aa22.22■■□□□ 1.15
CHRNA4-211ENST00000628606 PDE3BQ13370 1112 aa22.21■■□□□ 1.15
CHRNA4-211ENST00000628606 TOM1L2Q6ZVM7 507 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms