RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 PLCH1Q4KWH8 1693 aa23.63■■□□□ 1.37
LINC00628-201ENST00000628516 NWD2Q9ULI1 1742 aa23.61■■□□□ 1.37
LINC00628-201ENST00000628516 ACEP12821 1306 aa23.6■■□□□ 1.37
LINC00628-201ENST00000628516 SRPK2P78362 688 aaKnown RBP23.6■■□□□ 1.37
LINC00628-201ENST00000628516 EP400Q96L91 3159 aa23.59■■□□□ 1.37
LINC00628-201ENST00000628516 PLEKHG3A1L390 1219 aa23.59■■□□□ 1.37
LINC00628-201ENST00000628516 NBPF8Q3BBV2 869 aa23.59■■□□□ 1.37
LINC00628-201ENST00000628516 BTG4Q9NY30 223 aa23.59■■□□□ 1.37
LINC00628-201ENST00000628516 POLR3AO14802 1390 aaPredicted RBP23.58■■□□□ 1.37
LINC00628-201ENST00000628516 CABP2Q9NPB3 220 aa23.58■■□□□ 1.37
LINC00628-201ENST00000628516 TOPAZ1Q8N9V7 1692 aa23.57■■□□□ 1.36
LINC00628-201ENST00000628516 SEPT12Q8IYM1 358 aa23.57■■□□□ 1.36
LINC00628-201ENST00000628516 NUTM2GQ5VZR2 741 aa23.56■■□□□ 1.36
LINC00628-201ENST00000628516 PRDM11Q9NQV5 511 aa23.55■■□□□ 1.36
LINC00628-201ENST00000628516 COL14A1Q05707 1796 aaKnown RBP23.55■■□□□ 1.36
LINC00628-201ENST00000628516 PPIP5K1Q6PFW1 1433 aa23.54■■□□□ 1.36
LINC00628-201ENST00000628516 QRICH2Q9H0J4 1663 aa23.54■■□□□ 1.36
LINC00628-201ENST00000628516 ROCK2O75116 1388 aaKnown RBP23.53■■□□□ 1.36
LINC00628-201ENST00000628516 CRYBG1Q9Y4K1 1723 aa23.53■■□□□ 1.36
LINC00628-201ENST00000628516 TRPM1Q7Z4N2 1603 aa23.53■■□□□ 1.36
LINC00628-201ENST00000628516 ONECUT3O60422 494 aaPredicted RBP23.52■■□□□ 1.36
LINC00628-201ENST00000628516 CCDC125Q86Z20 511 aa23.52■■□□□ 1.36
LINC00628-201ENST00000628516 NRAPQ86VF7 1730 aa23.52■■□□□ 1.36
LINC00628-201ENST00000628516 A0A0G2JS52 829 aa23.51■■□□□ 1.35
LINC00628-201ENST00000628516 MYT1Q01538 1121 aa23.51■■□□□ 1.35
LINC00628-201ENST00000628516 ABTB2Q8N961 1025 aa23.51■■□□□ 1.35
LINC00628-201ENST00000628516 KIAA0232Q92628 1395 aa23.51■■□□□ 1.35
LINC00628-201ENST00000628516 PCGF6Q9BYE7 350 aa23.5■■□□□ 1.35
LINC00628-201ENST00000628516 BRWD3Q6RI45 1802 aa23.49■■□□□ 1.35
LINC00628-201ENST00000628516 ZC3H6P61129 1189 aaKnown RBP23.49■■□□□ 1.35
LINC00628-201ENST00000628516 FAM98CQ17RN3 349 aaKnown RBP23.49■■□□□ 1.35
LINC00628-201ENST00000628516 CHRNA2Q15822 529 aa23.48■■□□□ 1.35
LINC00628-201ENST00000628516 KRT27Q7Z3Y8 459 aa23.48■■□□□ 1.35
LINC00628-201ENST00000628516 CABP1Q9NZU7 370 aa23.48■■□□□ 1.35
LINC00628-201ENST00000628516 EVC2Q86UK5 1308 aa23.48■■□□□ 1.35
LINC00628-201ENST00000628516 PHRF1Q9P1Y6 1649 aaKnown RBP23.48■■□□□ 1.35
LINC00628-201ENST00000628516 SPATA31A5Q5VU36 1347 aa23.45■■□□□ 1.34
LINC00628-201ENST00000628516 SPATA31A7Q8IWB4 1347 aa23.45■■□□□ 1.34
LINC00628-201ENST00000628516 BLMP54132 1417 aaPredicted RBP23.44■■□□□ 1.34
LINC00628-201ENST00000628516 NLRP13Q86W25 1043 aa23.44■■□□□ 1.34
LINC00628-201ENST00000628516 STRN4Q9NRL3 753 aa23.44■■□□□ 1.34
LINC00628-201ENST00000628516 SRCAPQ6ZRS2 3230 aa23.44■■□□□ 1.34
LINC00628-201ENST00000628516 BRD4O60885 1362 aaPredicted RBP23.42■■□□□ 1.34
LINC00628-201ENST00000628516 USP19O94966 1318 aa23.42■■□□□ 1.34
LINC00628-201ENST00000628516 TONSLQ96HA7 1378 aa23.41■■□□□ 1.34
LINC00628-201ENST00000628516 SF3B2Q13435 895 aaKnown RBP23.41■■□□□ 1.34
LINC00628-201ENST00000628516 USP6P35125 1406 aa23.41■■□□□ 1.34
LINC00628-201ENST00000628516 NRKQ7Z2Y5 1582 aa23.4■■□□□ 1.34
LINC00628-201ENST00000628516 EVA1CP58658 441 aa23.4■■□□□ 1.34
LINC00628-201ENST00000628516 SPATA31A1Q5TZJ5 1347 aa23.39■■□□□ 1.34
LINC00628-201ENST00000628516 GCP02774 474 aa23.39■■□□□ 1.33
LINC00628-201ENST00000628516 CARD11Q9BXL7 1154 aa23.39■■□□□ 1.33
LINC00628-201ENST00000628516 ZRANB1Q9UGI0 708 aa23.39■■□□□ 1.33
LINC00628-201ENST00000628516 NLRP6P59044 892 aa23.38■■□□□ 1.33
LINC00628-201ENST00000628516 CPDO75976 1380 aa23.38■■□□□ 1.33
LINC00628-201ENST00000628516 DEFB132Q7Z7B7 95 aa23.37■■□□□ 1.33
LINC00628-201ENST00000628516 USP35Q9P2H5 1018 aa23.36■■□□□ 1.33
LINC00628-201ENST00000628516 ZNF692Q9BU19 519 aaPredicted RBP23.35■■□□□ 1.33
LINC00628-201ENST00000628516 SSH2Q76I76 1423 aa23.34■■□□□ 1.33
LINC00628-201ENST00000628516 ZBTB7CA1YPR0 619 aa23.34■■□□□ 1.33
LINC00628-201ENST00000628516 FAM182BQ5T319 152 aa23.34■■□□□ 1.33
LINC00628-201ENST00000628516 CAMTA1Q9Y6Y1 1673 aa23.34■■□□□ 1.33
LINC00628-201ENST00000628516 THSD7AQ9UPZ6 1657 aa23.33■■□□□ 1.33
LINC00628-201ENST00000628516 LARP1Q6PKG0 1096 aaKnown RBP23.33■■□□□ 1.33
LINC00628-201ENST00000628516 TTC21BQ7Z4L5 1316 aa23.32■■□□□ 1.32
LINC00628-201ENST00000628516 SBNO2Q9Y2G9 1366 aa23.31■■□□□ 1.32
LINC00628-201ENST00000628516 LMO7Q8WWI1 1683 aa23.31■■□□□ 1.32
LINC00628-201ENST00000628516 BAG6P46379 1132 aa23.29■■□□□ 1.32
LINC00628-201ENST00000628516 BARGINQ6ZT62 677 aa23.29■■□□□ 1.32
LINC00628-201ENST00000628516 PIK3C2AO00443 1686 aa23.28■■□□□ 1.32
LINC00628-201ENST00000628516 SLIT3O75094 1523 aa23.28■■□□□ 1.32
LINC00628-201ENST00000628516 TCP11L2Q8N4U5 519 aa23.28■■□□□ 1.32
LINC00628-201ENST00000628516 KTN1Q86UP2 1357 aaKnown RBP23.27■■□□□ 1.32
LINC00628-201ENST00000628516 CPSF1Q10570 1443 aaKnown RBP23.27■■□□□ 1.32
LINC00628-201ENST00000628516 COL5A2P05997 1499 aaPredicted RBP23.27■■□□□ 1.32
LINC00628-201ENST00000628516 TTC21AQ8NDW8 1320 aa23.27■■□□□ 1.32
LINC00628-201ENST00000628516 AKAP12Q02952 1782 aa23.27■■□□□ 1.32
LINC00628-201ENST00000628516 TMC1Q8TDI8 760 aa23.25■■□□□ 1.31
LINC00628-201ENST00000628516 AATKQ6ZMQ8 1374 aa23.25■■□□□ 1.31
LINC00628-201ENST00000628516 SOX12O15370 315 aa23.24■■□□□ 1.31
LINC00628-201ENST00000628516 PDE3BQ13370 1112 aa23.24■■□□□ 1.31
LINC00628-201ENST00000628516 FAM196AQ6ZSG2 479 aa23.24■■□□□ 1.31
LINC00628-201ENST00000628516 KCNH5Q8NCM2 988 aa23.24■■□□□ 1.31
LINC00628-201ENST00000628516 THRAP3Q9Y2W1 955 aaKnown RBP23.24■■□□□ 1.31
LINC00628-201ENST00000628516 EN1Q05925 392 aaPredicted RBP23.22■■□□□ 1.31
LINC00628-201ENST00000628516 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.22■■□□□ 1.31
LINC00628-201ENST00000628516 CRB1P82279 1406 aa23.22■■□□□ 1.31
LINC00628-201ENST00000628516 RGPD1P0DJD0 1748 aa23.22■■□□□ 1.31
LINC00628-201ENST00000628516 TRIM37O94972 964 aa23.2■■□□□ 1.3
LINC00628-201ENST00000628516 TOM1L2Q6ZVM7 507 aa23.2■■□□□ 1.3
LINC00628-201ENST00000628516 HDGFL2Q7Z4V5 671 aaPredicted RBP23.2■■□□□ 1.3
LINC00628-201ENST00000628516 ARHGEF25Q86VW2 580 aa23.2■■□□□ 1.3
LINC00628-201ENST00000628516 SLC12A5Q9H2X9 1139 aa23.2■■□□□ 1.3
LINC00628-201ENST00000628516 AXIN2Q9Y2T1 843 aa23.2■■□□□ 1.3
LINC00628-201ENST00000628516 MON2Q7Z3U7 1717 aa23.19■■□□□ 1.3
LINC00628-201ENST00000628516 ST20-MTHFSA0A0A6YYL1 179 aa23.18■■□□□ 1.3
LINC00628-201ENST00000628516 CD163L1Q9NR16 1453 aa23.17■■□□□ 1.3
LINC00628-201ENST00000628516 COL18A1P39060 1754 aa23.17■■□□□ 1.3
LINC00628-201ENST00000628516 NME9Q86XW9 330 aa23.16■■□□□ 1.3
LINC00628-201ENST00000628516 PUS7Q96PZ0 661 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms