RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 QRICH2Q9H0J4 1663 aa17.42■□□□□ 0.38
UBR1-212ENST00000627960 ATAD2Q6PL18 1390 aa17.41■□□□□ 0.38
UBR1-212ENST00000627960 CRYBG1Q9Y4K1 1723 aa17.41■□□□□ 0.38
UBR1-212ENST00000627960 PLEKHG3A1L390 1219 aa17.41■□□□□ 0.38
UBR1-212ENST00000627960 ACEP12821 1306 aa17.41■□□□□ 0.38
UBR1-212ENST00000627960 POLR3AO14802 1390 aaPredicted RBP17.4■□□□□ 0.38
UBR1-212ENST00000627960 VPS72Q15906 364 aa17.4■□□□□ 0.38
UBR1-212ENST00000627960 NBPF8Q3BBV2 869 aa17.39■□□□□ 0.37
UBR1-212ENST00000627960 COL14A1Q05707 1796 aaKnown RBP17.38■□□□□ 0.37
UBR1-212ENST00000627960 SRPK2P78362 688 aaKnown RBP17.38■□□□□ 0.37
UBR1-212ENST00000627960 BRWD3Q6RI45 1802 aa17.37■□□□□ 0.37
UBR1-212ENST00000627960 CABP2Q9NPB3 220 aa17.37■□□□□ 0.37
UBR1-212ENST00000627960 NRAPQ86VF7 1730 aa17.37■□□□□ 0.37
UBR1-212ENST00000627960 BTG4Q9NY30 223 aa17.36■□□□□ 0.37
UBR1-212ENST00000627960 ONECUT3O60422 494 aaPredicted RBP17.35■□□□□ 0.37
UBR1-212ENST00000627960 CCDC9Q9Y3X0 531 aaKnown RBP17.35■□□□□ 0.37
UBR1-212ENST00000627960 ROCK2O75116 1388 aaKnown RBP17.35■□□□□ 0.37
UBR1-212ENST00000627960 PPIP5K1Q6PFW1 1433 aa17.35■□□□□ 0.37
UBR1-212ENST00000627960 PHRF1Q9P1Y6 1649 aaKnown RBP17.34■□□□□ 0.37
UBR1-212ENST00000627960 TRIM26Q12899 539 aaPredicted RBP17.33■□□□□ 0.36
UBR1-212ENST00000627960 NUTM2GQ5VZR2 741 aa17.33■□□□□ 0.36
UBR1-212ENST00000627960 SEPT12Q8IYM1 358 aa17.33■□□□□ 0.36
UBR1-212ENST00000627960 PRDM11Q9NQV5 511 aa17.32■□□□□ 0.36
UBR1-212ENST00000627960 EVC2Q86UK5 1308 aa17.31■□□□□ 0.36
UBR1-212ENST00000627960 CCDC125Q86Z20 511 aa17.31■□□□□ 0.36
UBR1-212ENST00000627960 ABTB2Q8N961 1025 aa17.31■□□□□ 0.36
UBR1-212ENST00000627960 CABP1Q9NZU7 370 aa17.31■□□□□ 0.36
UBR1-212ENST00000627960 KIAA0232Q92628 1395 aa17.3■□□□□ 0.36
UBR1-212ENST00000627960 EP400Q96L91 3159 aa17.3■□□□□ 0.36
UBR1-212ENST00000627960 BRD4O60885 1362 aaPredicted RBP17.29■□□□□ 0.36
UBR1-212ENST00000627960 SPATA31A5Q5VU36 1347 aa17.28■□□□□ 0.36
UBR1-212ENST00000627960 SPATA31A7Q8IWB4 1347 aa17.28■□□□□ 0.36
UBR1-212ENST00000627960 ZC3H6P61129 1189 aaKnown RBP17.28■□□□□ 0.36
UBR1-212ENST00000627960 CHRNA2Q15822 529 aa17.28■□□□□ 0.36
UBR1-212ENST00000627960 TONSLQ96HA7 1378 aa17.28■□□□□ 0.36
UBR1-212ENST00000627960 USP19O94966 1318 aa17.27■□□□□ 0.36
UBR1-212ENST00000627960 FAM98CQ17RN3 349 aaKnown RBP17.27■□□□□ 0.36
UBR1-212ENST00000627960 NLRP13Q86W25 1043 aa17.27■□□□□ 0.36
UBR1-212ENST00000627960 NRKQ7Z2Y5 1582 aa17.27■□□□□ 0.35
UBR1-212ENST00000627960 KRT27Q7Z3Y8 459 aa17.26■□□□□ 0.35
UBR1-212ENST00000627960 USP6P35125 1406 aa17.26■□□□□ 0.35
UBR1-212ENST00000627960 CARD11Q9BXL7 1154 aa17.25■□□□□ 0.35
UBR1-212ENST00000627960 AKAP12Q02952 1782 aa17.25■□□□□ 0.35
UBR1-212ENST00000627960 A0A0G2JS52 829 aa17.24■□□□□ 0.35
UBR1-212ENST00000627960 MYT1Q01538 1121 aa17.24■□□□□ 0.35
UBR1-212ENST00000627960 CPDO75976 1380 aa17.24■□□□□ 0.35
UBR1-212ENST00000627960 BLMP54132 1417 aaPredicted RBP17.23■□□□□ 0.35
UBR1-212ENST00000627960 SSH2Q76I76 1423 aa17.23■□□□□ 0.35
UBR1-212ENST00000627960 GCP02774 474 aa17.23■□□□□ 0.35
UBR1-212ENST00000627960 ZNF692Q9BU19 519 aaPredicted RBP17.23■□□□□ 0.35
UBR1-212ENST00000627960 STRN4Q9NRL3 753 aa17.23■□□□□ 0.35
UBR1-212ENST00000627960 SPATA31A1Q5TZJ5 1347 aa17.22■□□□□ 0.35
UBR1-212ENST00000627960 NLRP6P59044 892 aa17.22■□□□□ 0.35
UBR1-212ENST00000627960 SBNO2Q9Y2G9 1366 aa17.22■□□□□ 0.35
UBR1-212ENST00000627960 LMO7Q8WWI1 1683 aa17.22■□□□□ 0.35
UBR1-212ENST00000627960 THSD7AQ9UPZ6 1657 aa17.22■□□□□ 0.35
UBR1-212ENST00000627960 CAMTA1Q9Y6Y1 1673 aa17.22■□□□□ 0.35
UBR1-212ENST00000627960 PIK3C2AO00443 1686 aa17.21■□□□□ 0.35
UBR1-212ENST00000627960 EVA1CP58658 441 aa17.21■□□□□ 0.35
UBR1-212ENST00000627960 TTC21BQ7Z4L5 1316 aa17.2■□□□□ 0.34
UBR1-212ENST00000627960 SF3B2Q13435 895 aaKnown RBP17.19■□□□□ 0.34
UBR1-212ENST00000627960 SLIT3O75094 1523 aa17.19■□□□□ 0.34
UBR1-212ENST00000627960 CPSF1Q10570 1443 aaKnown RBP17.18■□□□□ 0.34
UBR1-212ENST00000627960 LARP1Q6PKG0 1096 aaKnown RBP17.17■□□□□ 0.34
UBR1-212ENST00000627960 DEFB132Q7Z7B7 95 aa17.17■□□□□ 0.34
UBR1-212ENST00000627960 ZRANB1Q9UGI0 708 aa17.17■□□□□ 0.34
UBR1-212ENST00000627960 KTN1Q86UP2 1357 aaKnown RBP17.16■□□□□ 0.34
UBR1-212ENST00000627960 MON2Q7Z3U7 1717 aa17.16■□□□□ 0.34
UBR1-212ENST00000627960 BARGINQ6ZT62 677 aa17.16■□□□□ 0.34
UBR1-212ENST00000627960 USP35Q9P2H5 1018 aa17.16■□□□□ 0.34
UBR1-212ENST00000627960 TTC21AQ8NDW8 1320 aa17.16■□□□□ 0.34
UBR1-212ENST00000627960 COL18A1P39060 1754 aa17.15■□□□□ 0.34
UBR1-212ENST00000627960 FAM182BQ5T319 152 aa17.15■□□□□ 0.34
UBR1-212ENST00000627960 AATKQ6ZMQ8 1374 aa17.15■□□□□ 0.34
UBR1-212ENST00000627960 COL5A2P05997 1499 aaPredicted RBP17.14■□□□□ 0.33
UBR1-212ENST00000627960 RGPD1P0DJD0 1748 aa17.14■□□□□ 0.33
UBR1-212ENST00000627960 ZBTB7CA1YPR0 619 aa17.14■□□□□ 0.33
UBR1-212ENST00000627960 TCP11L2Q8N4U5 519 aa17.14■□□□□ 0.33
UBR1-212ENST00000627960 KCNH5Q8NCM2 988 aa17.13■□□□□ 0.33
UBR1-212ENST00000627960 PUS7Q96PZ0 661 aaKnown RBP17.13■□□□□ 0.33
UBR1-212ENST00000627960 THRAP3Q9Y2W1 955 aaKnown RBP17.13■□□□□ 0.33
UBR1-212ENST00000627960 TMC1Q8TDI8 760 aa17.12■□□□□ 0.33
UBR1-212ENST00000627960 RGPD5Q99666 1765 aa17.12■□□□□ 0.33
UBR1-212ENST00000627960 CD163L1Q9NR16 1453 aa17.12■□□□□ 0.33
UBR1-212ENST00000627960 BAG6P46379 1132 aa17.11■□□□□ 0.33
UBR1-212ENST00000627960 ARHGEF25Q86VW2 580 aa17.11■□□□□ 0.33
UBR1-212ENST00000627960 SLC12A5Q9H2X9 1139 aa17.11■□□□□ 0.33
UBR1-212ENST00000627960 CRB1P82279 1406 aa17.11■□□□□ 0.33
UBR1-212ENST00000627960 ST20-MTHFSA0A0A6YYL1 179 aa17.1■□□□□ 0.33
UBR1-212ENST00000627960 FAM196AQ6ZSG2 479 aa17.1■□□□□ 0.33
UBR1-212ENST00000627960 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.1■□□□□ 0.33
UBR1-212ENST00000627960 TESK2Q96S53 571 aa17.1■□□□□ 0.33
UBR1-212ENST00000627960 AXIN2Q9Y2T1 843 aa17.1■□□□□ 0.33
UBR1-212ENST00000627960 PARP4Q9UKK3 1724 aaKnown RBP17.1■□□□□ 0.33
UBR1-212ENST00000627960 PDE3BQ13370 1112 aa17.09■□□□□ 0.33
UBR1-212ENST00000627960 HDGFL2Q7Z4V5 671 aaPredicted RBP17.09■□□□□ 0.33
UBR1-212ENST00000627960 USP31Q70CQ4 1352 aa17.09■□□□□ 0.33
UBR1-212ENST00000627960 USP54Q70EL1 1684 aa17.09■□□□□ 0.33
UBR1-212ENST00000627960 TNS1Q9HBL0 1735 aaKnown RBP17.09■□□□□ 0.33
UBR1-212ENST00000627960 NFAT5O94916 1531 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms