RNA–Protein interactions for RNA: ENST00000627809.1

SPTAN1-213, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-213ENST00000627809 MYOM1P52179 1685 aa11.65□□□□□ -0.55
SPTAN1-213ENST00000627809 COL18A1P39060 1754 aa11.64□□□□□ -0.55
SPTAN1-213ENST00000627809 LMOD2Q6P5Q4 547 aa11.64□□□□□ -0.55
SPTAN1-213ENST00000627809 COL14A1Q05707 1796 aaKnown RBP11.64□□□□□ -0.55
SPTAN1-213ENST00000627809 FNBP4Q8N3X1 1017 aaPredicted RBP11.63□□□□□ -0.55
SPTAN1-213ENST00000627809 NGLY1Q96IV0 654 aa11.63□□□□□ -0.55
SPTAN1-213ENST00000627809 QTRT2Q9H974 415 aaKnown RBP11.63□□□□□ -0.55
SPTAN1-213ENST00000627809 TONSLQ96HA7 1378 aa11.63□□□□□ -0.55
SPTAN1-213ENST00000627809 SSH2Q76I76 1423 aa11.62□□□□□ -0.55
SPTAN1-213ENST00000627809 FAM83GA6ND36 823 aa11.62□□□□□ -0.55
SPTAN1-213ENST00000627809 PSME1Q06323 249 aa11.62□□□□□ -0.55
SPTAN1-213ENST00000627809 ZRANB1Q9UGI0 708 aa11.62□□□□□ -0.55
SPTAN1-213ENST00000627809 USP21Q9UK80 565 aa11.62□□□□□ -0.55
SPTAN1-213ENST00000627809 STAC3Q96MF2 364 aa11.61□□□□□ -0.55
SPTAN1-213ENST00000627809 CAMTA1Q9Y6Y1 1673 aa11.6□□□□□ -0.55
SPTAN1-213ENST00000627809 SRPK2P78362 688 aaKnown RBP11.6□□□□□ -0.55
SPTAN1-213ENST00000627809 CHRNA2Q15822 529 aa11.6□□□□□ -0.55
SPTAN1-213ENST00000627809 NGDNQ8NEJ9 315 aaKnown RBP11.6□□□□□ -0.55
SPTAN1-213ENST00000627809 CABP1Q9NZU7 370 aa11.6□□□□□ -0.55
SPTAN1-213ENST00000627809 WNK3Q9BYP7 1800 aa11.6□□□□□ -0.55
SPTAN1-213ENST00000627809 USP6P35125 1406 aa11.6□□□□□ -0.55
SPTAN1-213ENST00000627809 CLSPNQ9HAW4 1339 aa11.6□□□□□ -0.55
SPTAN1-213ENST00000627809 LTN1O94822 1766 aa11.59□□□□□ -0.55
SPTAN1-213ENST00000627809 THSD7AQ9UPZ6 1657 aa11.59□□□□□ -0.55
SPTAN1-213ENST00000627809 CDK12Q9NYV4 1490 aaPredicted RBP11.59□□□□□ -0.55
SPTAN1-213ENST00000627809 PLEKHG3A1L390 1219 aa11.59□□□□□ -0.55
SPTAN1-213ENST00000627809 PAK3O75914 559 aaPredicted RBP11.59□□□□□ -0.55
SPTAN1-213ENST00000627809 ZNF772Q68DY9 489 aaPredicted RBP11.59□□□□□ -0.55
SPTAN1-213ENST00000627809 TESK2Q96S53 571 aa11.59□□□□□ -0.55
SPTAN1-213ENST00000627809 SLIT3O75094 1523 aa11.59□□□□□ -0.55
SPTAN1-213ENST00000627809 RGPD2P0DJD1 1756 aa11.59□□□□□ -0.55
SPTAN1-213ENST00000627809 USP54Q70EL1 1684 aa11.59□□□□□ -0.55
SPTAN1-213ENST00000627809 KIAA0232Q92628 1395 aa11.58□□□□□ -0.56
SPTAN1-213ENST00000627809 RXRBP28702 533 aa11.58□□□□□ -0.56
SPTAN1-213ENST00000627809 CCER1Q8TC90 406 aaPredicted RBP11.58□□□□□ -0.56
SPTAN1-213ENST00000627809 ARHGEF10O15013 1369 aa11.57□□□□□ -0.56
SPTAN1-213ENST00000627809 NFAT5O94916 1531 aa11.57□□□□□ -0.56
SPTAN1-213ENST00000627809 UPF1Q92900 1129 aaKnown RBP eCLIP11.57□□□□□ -0.56
SPTAN1-213ENST00000627809 CARD11Q9BXL7 1154 aa11.57□□□□□ -0.56
SPTAN1-213ENST00000627809 CCDC61Q9Y6R9 512 aa11.57□□□□□ -0.56
SPTAN1-213ENST00000627809 EIF3AQ14152 1382 aaKnown RBP11.56□□□□□ -0.56
SPTAN1-213ENST00000627809 CPSF1Q10570 1443 aaKnown RBP11.56□□□□□ -0.56
SPTAN1-213ENST00000627809 USP19O94966 1318 aa11.56□□□□□ -0.56
SPTAN1-213ENST00000627809 TNS1Q9HBL0 1735 aaKnown RBP11.55□□□□□ -0.56
SPTAN1-213ENST00000627809 ST20-MTHFSA0A0A6YYL1 179 aa11.55□□□□□ -0.56
SPTAN1-213ENST00000627809 ZC3H6P61129 1189 aaKnown RBP11.55□□□□□ -0.56
SPTAN1-213ENST00000627809 RBM6P78332 1123 aaKnown RBP11.55□□□□□ -0.56
SPTAN1-213ENST00000627809 FAM182BQ5T319 152 aa11.55□□□□□ -0.56
SPTAN1-213ENST00000627809 UNC5CLQ8IV45 518 aa11.54□□□□□ -0.56
SPTAN1-213ENST00000627809 SLC12A5Q9H2X9 1139 aa11.54□□□□□ -0.56
SPTAN1-213ENST00000627809 BTG4Q9NY30 223 aa11.54□□□□□ -0.56
SPTAN1-213ENST00000627809 SBNO2Q9Y2G9 1366 aa11.54□□□□□ -0.56
SPTAN1-213ENST00000627809 GJD4Q96KN9 370 aaPredicted RBP11.53□□□□□ -0.56
SPTAN1-213ENST00000627809 TRPC5Q9UL62 973 aaPredicted RBP11.53□□□□□ -0.56
SPTAN1-213ENST00000627809 KIF20BQ96Q89 1820 aa11.53□□□□□ -0.56
SPTAN1-213ENST00000627809 A0A1W2PP64 1363 aa11.53□□□□□ -0.56
SPTAN1-213ENST00000627809 USP47Q96K76 1375 aa11.53□□□□□ -0.56
SPTAN1-213ENST00000627809 FBLN1P23142 703 aa11.52□□□□□ -0.57
SPTAN1-213ENST00000627809 TTC21BQ7Z4L5 1316 aa11.52□□□□□ -0.57
SPTAN1-213ENST00000627809 EVC2Q86UK5 1308 aa11.52□□□□□ -0.57
SPTAN1-213ENST00000627809 LRRC37A3O60309 1634 aa11.52□□□□□ -0.57
SPTAN1-213ENST00000627809 SOX12O15370 315 aa11.51□□□□□ -0.57
SPTAN1-213ENST00000627809 HAP1P54257 671 aaPredicted RBP11.51□□□□□ -0.57
SPTAN1-213ENST00000627809 NME9Q86XW9 330 aa11.51□□□□□ -0.57
SPTAN1-213ENST00000627809 PEAK1Q9H792 1746 aa11.51□□□□□ -0.57
SPTAN1-213ENST00000627809 SBF2Q86WG5 1849 aa11.51□□□□□ -0.57
SPTAN1-213ENST00000627809 COL5A2P05997 1499 aaPredicted RBP11.51□□□□□ -0.57
SPTAN1-213ENST00000627809 VPS72Q15906 364 aa11.5□□□□□ -0.57
SPTAN1-213ENST00000627809 ABTB2Q8N961 1025 aa11.5□□□□□ -0.57
SPTAN1-213ENST00000627809 PRDM11Q9NQV5 511 aa11.5□□□□□ -0.57
SPTAN1-213ENST00000627809 AXIN2Q9Y2T1 843 aa11.5□□□□□ -0.57
SPTAN1-213ENST00000627809 FAM98CQ17RN3 349 aaKnown RBP11.49□□□□□ -0.57
SPTAN1-213ENST00000627809 LARP1Q6PKG0 1096 aaKnown RBP11.49□□□□□ -0.57
SPTAN1-213ENST00000627809 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.49□□□□□ -0.57
SPTAN1-213ENST00000627809 KTN1Q86UP2 1357 aaKnown RBP11.49□□□□□ -0.57
SPTAN1-213ENST00000627809 PARP4Q9UKK3 1724 aaKnown RBP11.49□□□□□ -0.57
SPTAN1-213ENST00000627809 ZBTB7CA1YPR0 619 aa11.48□□□□□ -0.57
SPTAN1-213ENST00000627809 SEPT12Q8IYM1 358 aa11.48□□□□□ -0.57
SPTAN1-213ENST00000627809 STRN4Q9NRL3 753 aa11.48□□□□□ -0.57
SPTAN1-213ENST00000627809 TIMELESSQ9UNS1 1208 aa11.48□□□□□ -0.57
SPTAN1-213ENST00000627809 SPATA31A5Q5VU36 1347 aa11.48□□□□□ -0.57
SPTAN1-213ENST00000627809 SPATA31A7Q8IWB4 1347 aa11.48□□□□□ -0.57
SPTAN1-213ENST00000627809 SHANK3Q9BYB0 1731 aa11.48□□□□□ -0.57
SPTAN1-213ENST00000627809 OVOS2A0A0J9YW53 1432 aa11.47□□□□□ -0.57
SPTAN1-213ENST00000627809 OVOS2Q6IE36 1432 aa11.47□□□□□ -0.57
SPTAN1-213ENST00000627809 CPDO75976 1380 aa11.47□□□□□ -0.57
SPTAN1-213ENST00000627809 ATAD2Q6PL18 1390 aa11.47□□□□□ -0.57
SPTAN1-213ENST00000627809 GCP02774 474 aa11.47□□□□□ -0.57
SPTAN1-213ENST00000627809 FAM208AQ9UK61 1670 aaKnown RBP11.46□□□□□ -0.57
SPTAN1-213ENST00000627809 C11orf95C9JLR9 678 aaPredicted RBP11.46□□□□□ -0.57
SPTAN1-213ENST00000627809 NLRP6P59044 892 aa11.46□□□□□ -0.57
SPTAN1-213ENST00000627809 TMC1Q8TDI8 760 aa11.46□□□□□ -0.57
SPTAN1-213ENST00000627809 USP35Q9P2H5 1018 aa11.46□□□□□ -0.57
SPTAN1-213ENST00000627809 CCDC9Q9Y3X0 531 aaKnown RBP11.46□□□□□ -0.57
SPTAN1-213ENST00000627809 SPATA31A1Q5TZJ5 1347 aa11.45□□□□□ -0.58
SPTAN1-213ENST00000627809 DEFB132Q7Z7B7 95 aa11.45□□□□□ -0.58
SPTAN1-213ENST00000627809 RGPD1P0DJD0 1748 aa11.44□□□□□ -0.58
SPTAN1-213ENST00000627809 SRCAPQ6ZRS2 3230 aa11.44□□□□□ -0.58
SPTAN1-213ENST00000627809 PTF1AQ7RTS3 328 aa11.44□□□□□ -0.58
SPTAN1-213ENST00000627809 ONECUT3O60422 494 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms