RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 TATP17735 454 aaPredicted RBP15.37■□□□□ 0.05
SCN8A-209ENST00000627620 SULT6B1Q6IMI4 303 aa15.37■□□□□ 0.05
SCN8A-209ENST00000627620 GCC1Q96CN9 775 aa15.37■□□□□ 0.05
SCN8A-209ENST00000627620 CABP1Q9NZU7 370 aa15.37■□□□□ 0.05
SCN8A-209ENST00000627620 SCAPERQ9BY12 1400 aa15.37■□□□□ 0.05
SCN8A-209ENST00000627620 IKQ13123 557 aaPredicted RBP15.36■□□□□ 0.05
SCN8A-209ENST00000627620 HDGFL1Q5TGJ6 251 aa15.36■□□□□ 0.05
SCN8A-209ENST00000627620 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.36■□□□□ 0.05
SCN8A-209ENST00000627620 PDE3AQ14432 1141 aa15.36■□□□□ 0.05
SCN8A-209ENST00000627620 FAM13BQ9NYF5 915 aa15.35■□□□□ 0.05
SCN8A-209ENST00000627620 FAM43AQ8N2R8 423 aa15.35■□□□□ 0.05
SCN8A-209ENST00000627620 CT47A1Q5JQC4 288 aaPredicted RBP15.35■□□□□ 0.05
SCN8A-209ENST00000627620 ZNF771Q7L3S4 317 aaPredicted RBP15.35■□□□□ 0.05
SCN8A-209ENST00000627620 MNS1Q8NEH6 495 aa15.35■□□□□ 0.05
SCN8A-209ENST00000627620 ATP2B1P20020 1258 aa15.35■□□□□ 0.05
SCN8A-209ENST00000627620 PDILTQ8N807 584 aa15.35■□□□□ 0.05
SCN8A-209ENST00000627620 RNF214Q8ND24 703 aa15.35■□□□□ 0.05
SCN8A-209ENST00000627620 ZNF692Q9BU19 519 aaPredicted RBP15.35■□□□□ 0.05
SCN8A-209ENST00000627620 CNNM1Q9NRU3 951 aa15.34■□□□□ 0.05
SCN8A-209ENST00000627620 BCAR3O75815 825 aa15.34■□□□□ 0.05
SCN8A-209ENST00000627620 NCAPD3P42695 1498 aa15.34■□□□□ 0.05
SCN8A-209ENST00000627620 EPS15P42566 896 aa15.34■□□□□ 0.05
SCN8A-209ENST00000627620 CCDC158Q5M9N0 1113 aa15.34■□□□□ 0.05
SCN8A-209ENST00000627620 TTC39AQ5SRH9 613 aa15.34■□□□□ 0.05
SCN8A-209ENST00000627620 C9orf84Q5VXU9 1444 aa15.34■□□□□ 0.05
SCN8A-209ENST00000627620 NASPP49321 788 aaPredicted RBP15.33■□□□□ 0.05
SCN8A-209ENST00000627620 MCM2P49736 904 aa15.33■□□□□ 0.05
SCN8A-209ENST00000627620 RRP12Q5JTH9 1297 aaKnown RBP15.33■□□□□ 0.05
SCN8A-209ENST00000627620 OFD1O75665 1012 aa15.33■□□□□ 0.05
SCN8A-209ENST00000627620 RABEP1Q15276 862 aa15.33■□□□□ 0.05
SCN8A-209ENST00000627620 THEMISQ8N1K5 641 aaPredicted RBP15.33■□□□□ 0.05
SCN8A-209ENST00000627620 TEX35Q5T0J7 233 aa15.33■□□□□ 0.04
SCN8A-209ENST00000627620 SLC3A2P08195 630 aaKnown RBP15.33■□□□□ 0.04
SCN8A-209ENST00000627620 CNKSR2Q8WXI2 1034 aa15.33■□□□□ 0.04
SCN8A-209ENST00000627620 KIAA1107Q9UPP5 1409 aa15.32■□□□□ 0.04
SCN8A-209ENST00000627620 PATL2C9JE40 543 aaKnown RBP15.32■□□□□ 0.04
SCN8A-209ENST00000627620 PDCP20941 246 aa15.32■□□□□ 0.04
SCN8A-209ENST00000627620 MRE11P49959 708 aa15.32■□□□□ 0.04
SCN8A-209ENST00000627620 CABP4P57796 275 aa15.32■□□□□ 0.04
SCN8A-209ENST00000627620 ARAP1Q96P48 1450 aa15.32■□□□□ 0.04
SCN8A-209ENST00000627620 CCT4P50991 539 aaKnown RBP15.32■□□□□ 0.04
SCN8A-209ENST00000627620 CAVIN1Q6NZI2 390 aaKnown RBP15.32■□□□□ 0.04
SCN8A-209ENST00000627620 KINO60870 393 aaKnown RBP15.32■□□□□ 0.04
SCN8A-209ENST00000627620 ZNF530Q6P9A1 599 aaPredicted RBP15.32■□□□□ 0.04
SCN8A-209ENST00000627620 R3HCC1Q9Y3T6 440 aaKnown RBP15.32■□□□□ 0.04
SCN8A-209ENST00000627620 NBPF8Q3BBV2 869 aa15.31■□□□□ 0.04
SCN8A-209ENST00000627620 PNISRQ8TF01 805 aaKnown RBP15.31■□□□□ 0.04
SCN8A-209ENST00000627620 RUFY1Q96T51 708 aa15.31■□□□□ 0.04
SCN8A-209ENST00000627620 CCDC39Q9UFE4 941 aa15.31■□□□□ 0.04
SCN8A-209ENST00000627620 TRAK2O60296 914 aa15.31■□□□□ 0.04
SCN8A-209ENST00000627620 LETM1O95202 739 aaPredicted RBP15.31■□□□□ 0.04
SCN8A-209ENST00000627620 ARGLU1Q9NWB6 273 aaPredicted RBP15.31■□□□□ 0.04
SCN8A-209ENST00000627620 ODF2Q5BJF6 829 aa15.31■□□□□ 0.04
SCN8A-209ENST00000627620 MBD3O95983 291 aa15.31■□□□□ 0.04
SCN8A-209ENST00000627620 SRCIN1Q9C0H9 1055 aa15.31■□□□□ 0.04
SCN8A-209ENST00000627620 SIL1Q9H173 461 aa15.3■□□□□ 0.04
SCN8A-209ENST00000627620 GNL3LQ9NVN8 582 aaKnown RBP15.3■□□□□ 0.04
SCN8A-209ENST00000627620 PRPF40AO75400 957 aaKnown RBP15.3■□□□□ 0.04
SCN8A-209ENST00000627620 LRRCC1Q9C099 1032 aa15.3■□□□□ 0.04
SCN8A-209ENST00000627620 TOM1L2Q6ZVM7 507 aa15.3■□□□□ 0.04
SCN8A-209ENST00000627620 DDX54Q8TDD1 881 aaKnown RBP15.3■□□□□ 0.04
SCN8A-209ENST00000627620 SLC52A1Q9NWF4 448 aa15.3■□□□□ 0.04
SCN8A-209ENST00000627620 TRIM5Q9C035 493 aa15.3■□□□□ 0.04
SCN8A-209ENST00000627620 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.3■□□□□ 0.04
SCN8A-209ENST00000627620 ZNF428Q96B54 188 aa15.29■□□□□ 0.04
SCN8A-209ENST00000627620 WDR63Q8IWG1 891 aa15.29■□□□□ 0.04
SCN8A-209ENST00000627620 PHF23Q9BUL5 403 aaPredicted RBP15.29■□□□□ 0.04
SCN8A-209ENST00000627620 PLEKHH2Q8IVE3 1493 aa15.29■□□□□ 0.04
SCN8A-209ENST00000627620 RTEL1-TNFRSF6BF6WH68 1400 aa15.29■□□□□ 0.04
SCN8A-209ENST00000627620 ZNF396Q96N95 335 aaPredicted RBP15.29■□□□□ 0.04
SCN8A-209ENST00000627620 ERICH3Q5RHP9 1530 aa15.29■□□□□ 0.04
SCN8A-209ENST00000627620 SPG7Q9UQ90 795 aa15.28■□□□□ 0.04
SCN8A-209ENST00000627620 FIBPO43427 364 aa15.28■□□□□ 0.04
SCN8A-209ENST00000627620 AK7Q96M32 723 aa15.28■□□□□ 0.04
SCN8A-209ENST00000627620 BCL11BQ9C0K0 894 aaPredicted RBP15.28■□□□□ 0.04
SCN8A-209ENST00000627620 STK38Q15208 465 aa15.28■□□□□ 0.04
SCN8A-209ENST00000627620 CDK5RAP3Q96JB5 506 aa15.28■□□□□ 0.04
SCN8A-209ENST00000627620 CEBPZQ03701 1054 aaKnown RBP15.28■□□□□ 0.04
SCN8A-209ENST00000627620 FMNL2Q96PY5 1086 aa15.28■□□□□ 0.04
SCN8A-209ENST00000627620 CYP46A1Q9Y6A2 500 aa15.28■□□□□ 0.04
SCN8A-209ENST00000627620 SMC2O95347 1197 aa15.27■□□□□ 0.04
SCN8A-209ENST00000627620 CT47B1P0C2W7 299 aaPredicted RBP15.27■□□□□ 0.04
SCN8A-209ENST00000627620 MYL6BP14649 208 aa15.27■□□□□ 0.04
SCN8A-209ENST00000627620 ATF7IPQ6VMQ6 1270 aa15.27■□□□□ 0.04
SCN8A-209ENST00000627620 ACBD3Q9H3P7 528 aa15.27■□□□□ 0.04
SCN8A-209ENST00000627620 CDR1P51861 262 aa15.27■□□□□ 0.04
SCN8A-209ENST00000627620 TXLNAP40222 546 aa15.27■□□□□ 0.04
SCN8A-209ENST00000627620 ZFYVE27Q5T4F4 411 aa15.27■□□□□ 0.04
SCN8A-209ENST00000627620 TSPY26PQ9H489 355 aa15.27■□□□□ 0.04
SCN8A-209ENST00000627620 ERBINQ96RT1 1412 aa15.27■□□□□ 0.03
SCN8A-209ENST00000627620 EHBP1L1Q8N3D4 1523 aa15.27■□□□□ 0.03
SCN8A-209ENST00000627620 MAP4K4O95819 1239 aaPredicted RBP15.26■□□□□ 0.03
SCN8A-209ENST00000627620 TTLL5Q6EMB2 1281 aa15.26■□□□□ 0.03
SCN8A-209ENST00000627620 FBXO3Q9UK99 471 aa15.26■□□□□ 0.03
SCN8A-209ENST00000627620 VSIG10Q8N0Z9 540 aa15.26■□□□□ 0.03
SCN8A-209ENST00000627620 CAGE1Q8TC20 777 aa15.26■□□□□ 0.03
SCN8A-209ENST00000627620 STK3Q13188 491 aa15.25■□□□□ 0.03
SCN8A-209ENST00000627620 SLC26A8Q96RN1 970 aa15.25■□□□□ 0.03
SCN8A-209ENST00000627620 MVPQ14764 893 aaKnown RBP15.25■□□□□ 0.03
SCN8A-209ENST00000627620 RRS1Q15050 365 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms