RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 ZNF692Q9BU19 519 aaPredicted RBP10.17□□□□□ -0.78
PTP4A1-206ENST00000627002 NKTRP30414 1462 aaKnown RBP10.17□□□□□ -0.78
PTP4A1-206ENST00000627002 CPSF1Q10570 1443 aaKnown RBP10.16□□□□□ -0.78
PTP4A1-206ENST00000627002 PRR36Q9H6K5 1346 aa10.16□□□□□ -0.78
PTP4A1-206ENST00000627002 PLEKHG3A1L390 1219 aa10.16□□□□□ -0.78
PTP4A1-206ENST00000627002 PPP2R1AP30153 589 aa10.16□□□□□ -0.78
PTP4A1-206ENST00000627002 POLA2Q14181 598 aa10.16□□□□□ -0.78
PTP4A1-206ENST00000627002 EDC4Q6P2E9 1401 aaKnown RBP10.16□□□□□ -0.78
PTP4A1-206ENST00000627002 ADGRL3Q9HAR2 1447 aa10.16□□□□□ -0.78
PTP4A1-206ENST00000627002 CDC42BPGQ6DT37 1551 aa10.15□□□□□ -0.78
PTP4A1-206ENST00000627002 HSPA1LP34931 641 aa10.15□□□□□ -0.78
PTP4A1-206ENST00000627002 FAM9BQ8IZU0 186 aa10.15□□□□□ -0.78
PTP4A1-206ENST00000627002 PROSER2Q86WR7 435 aaPredicted RBP10.14□□□□□ -0.79
PTP4A1-206ENST00000627002 PNISRQ8TF01 805 aaKnown RBP10.14□□□□□ -0.79
PTP4A1-206ENST00000627002 NCOA3Q9Y6Q9 1424 aa10.14□□□□□ -0.79
PTP4A1-206ENST00000627002 C14orf37Q86TY3 774 aa10.13□□□□□ -0.79
PTP4A1-206ENST00000627002 INSRP06213 1382 aa10.13□□□□□ -0.79
PTP4A1-206ENST00000627002 TOPAZ1Q8N9V7 1692 aa10.12□□□□□ -0.79
PTP4A1-206ENST00000627002 ACEP12821 1306 aa10.12□□□□□ -0.79
PTP4A1-206ENST00000627002 FYB1O15117 783 aa10.12□□□□□ -0.79
PTP4A1-206ENST00000627002 POLR3AO14802 1390 aaPredicted RBP10.12□□□□□ -0.79
PTP4A1-206ENST00000627002 NUTM2FA1L443 756 aa10.11□□□□□ -0.79
PTP4A1-206ENST00000627002 HNRNPUQ00839 825 aaKnown RBP eCLIP10.11□□□□□ -0.79
PTP4A1-206ENST00000627002 NALCNQ8IZF0 1738 aa10.1□□□□□ -0.79
PTP4A1-206ENST00000627002 FMN2Q9NZ56 1722 aa10.1□□□□□ -0.79
PTP4A1-206ENST00000627002 USP6P35125 1406 aa10.1□□□□□ -0.79
PTP4A1-206ENST00000627002 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.1□□□□□ -0.79
PTP4A1-206ENST00000627002 NGDNQ8NEJ9 315 aaKnown RBP10.1□□□□□ -0.79
PTP4A1-206ENST00000627002 CFAP53Q96M91 514 aa10.1□□□□□ -0.79
PTP4A1-206ENST00000627002 GGNBP2Q9H3C7 697 aa10.1□□□□□ -0.79
PTP4A1-206ENST00000627002 C19orf44Q9H6X5 657 aa10.1□□□□□ -0.79
PTP4A1-206ENST00000627002 ITSN1Q15811 1721 aa10.1□□□□□ -0.79
PTP4A1-206ENST00000627002 TTC21AQ8NDW8 1320 aa10.09□□□□□ -0.79
PTP4A1-206ENST00000627002 DCCP43146 1447 aa10.09□□□□□ -0.79
PTP4A1-206ENST00000627002 WDR43Q15061 677 aaKnown RBP eCLIP10.09□□□□□ -0.79
PTP4A1-206ENST00000627002 TMEM94Q12767 1356 aa10.09□□□□□ -0.79
PTP4A1-206ENST00000627002 TTC21BQ7Z4L5 1316 aa10.08□□□□□ -0.8
PTP4A1-206ENST00000627002 MON2Q7Z3U7 1717 aa10.08□□□□□ -0.8
PTP4A1-206ENST00000627002 TNNT2P45379 298 aaPredicted RBP10.08□□□□□ -0.8
PTP4A1-206ENST00000627002 PMFBP1Q8TBY8 1022 aa10.08□□□□□ -0.8
PTP4A1-206ENST00000627002 RBM33Q96EV2 1170 aaKnown RBP10.08□□□□□ -0.8
PTP4A1-206ENST00000627002 COG3Q96JB2 828 aa10.08□□□□□ -0.8
PTP4A1-206ENST00000627002 PHF8Q9UPP1 1060 aa10.08□□□□□ -0.8
PTP4A1-206ENST00000627002 MED1Q15648 1581 aaPredicted RBP10.08□□□□□ -0.8
PTP4A1-206ENST00000627002 AKAP12Q02952 1782 aa10.08□□□□□ -0.8
PTP4A1-206ENST00000627002 SSH2Q76I76 1423 aa10.07□□□□□ -0.8
PTP4A1-206ENST00000627002 ATF3P18847 181 aa10.07□□□□□ -0.8
PTP4A1-206ENST00000627002 MTHFSP49914 203 aa10.07□□□□□ -0.8
PTP4A1-206ENST00000627002 NME9Q86XW9 330 aa10.07□□□□□ -0.8
PTP4A1-206ENST00000627002 ANKRD26Q9UPS8 1709 aa10.07□□□□□ -0.8
PTP4A1-206ENST00000627002 ZBED9Q6R2W3 1325 aa10.07□□□□□ -0.8
PTP4A1-206ENST00000627002 NRKQ7Z2Y5 1582 aa10.06□□□□□ -0.8
PTP4A1-206ENST00000627002 MSH6P52701 1360 aa10.06□□□□□ -0.8
PTP4A1-206ENST00000627002 AATKQ6ZMQ8 1374 aa10.06□□□□□ -0.8
PTP4A1-206ENST00000627002 KIF20BQ96Q89 1820 aa10.06□□□□□ -0.8
PTP4A1-206ENST00000627002 CADPS2Q86UW7 1296 aa10.06□□□□□ -0.8
PTP4A1-206ENST00000627002 ESCO1Q5FWF5 840 aa10.05□□□□□ -0.8
PTP4A1-206ENST00000627002 BLMP54132 1417 aaPredicted RBP10.05□□□□□ -0.8
PTP4A1-206ENST00000627002 C1orf167Q5SNV9 1468 aa10.04□□□□□ -0.8
PTP4A1-206ENST00000627002 USP31Q70CQ4 1352 aa10.04□□□□□ -0.8
PTP4A1-206ENST00000627002 ADAMTS8Q9UP79 889 aa10.04□□□□□ -0.8
PTP4A1-206ENST00000627002 NUDCQ9Y266 331 aa10.04□□□□□ -0.8
PTP4A1-206ENST00000627002 OVOS2A0A0J9YW53 1432 aa10.04□□□□□ -0.8
PTP4A1-206ENST00000627002 OVOS2Q6IE36 1432 aa10.04□□□□□ -0.8
PTP4A1-206ENST00000627002 LRRC7Q96NW7 1537 aa10.03□□□□□ -0.8
PTP4A1-206ENST00000627002 ATXN8OSP0DMR3 200 aa10.03□□□□□ -0.8
PTP4A1-206ENST00000627002 PSME1Q06323 249 aa10.03□□□□□ -0.8
PTP4A1-206ENST00000627002 SMG6Q86US8 1419 aaKnown RBP10.03□□□□□ -0.8
PTP4A1-206ENST00000627002 STRCP1A6NGW2 1772 aa10.03□□□□□ -0.8
PTP4A1-206ENST00000627002 PNPLA6Q8IY17 1366 aa10.02□□□□□ -0.8
PTP4A1-206ENST00000627002 MST1RQ04912 1400 aa10.02□□□□□ -0.81
PTP4A1-206ENST00000627002 ORAI2Q96SN7 254 aa10.02□□□□□ -0.81
PTP4A1-206ENST00000627002 POLKQ9UBT6 870 aa10.02□□□□□ -0.81
PTP4A1-206ENST00000627002 ZRANB1Q9UGI0 708 aa10.02□□□□□ -0.81
PTP4A1-206ENST00000627002 NGEFQ8N5V2 710 aa10.01□□□□□ -0.81
PTP4A1-206ENST00000627002 KIF1AQ12756 1690 aa10.01□□□□□ -0.81
PTP4A1-206ENST00000627002 COL3A1P02461 1466 aaPredicted RBP10□□□□□ -0.81
PTP4A1-206ENST00000627002 CDK12Q9NYV4 1490 aaPredicted RBP10□□□□□ -0.81
PTP4A1-206ENST00000627002 DIAPH1O60610 1272 aaKnown RBP10□□□□□ -0.81
PTP4A1-206ENST00000627002 PAK3O75914 559 aaPredicted RBP10□□□□□ -0.81
PTP4A1-206ENST00000627002 ABTB2Q8N961 1025 aa10□□□□□ -0.81
PTP4A1-206ENST00000627002 RGPD8O14715 1765 aaPredicted RBP9.99□□□□□ -0.81
PTP4A1-206ENST00000627002 PPM1GO15355 546 aaPredicted RBP9.99□□□□□ -0.81
PTP4A1-206ENST00000627002 FOXO3O43524 673 aa9.99□□□□□ -0.81
PTP4A1-206ENST00000627002 NLRP6P59044 892 aa9.99□□□□□ -0.81
PTP4A1-206ENST00000627002 PNNQ9H307 717 aaKnown RBP9.99□□□□□ -0.81
PTP4A1-206ENST00000627002 U2AF1L5P0DN76 240 aaPredicted RBP9.98□□□□□ -0.81
PTP4A1-206ENST00000627002 U2AF1Q01081 240 aaKnown RBP eCLIP9.98□□□□□ -0.812e-20■■■■■ 72.7
PTP4A1-206ENST00000627002 PDE3BQ13370 1112 aa9.98□□□□□ -0.81
PTP4A1-206ENST00000627002 KRT28Q7Z3Y7 464 aa9.98□□□□□ -0.81
PTP4A1-206ENST00000627002 RUNDC1Q96C34 613 aa9.98□□□□□ -0.81
PTP4A1-206ENST00000627002 EMILIN1Q9Y6C2 1016 aa9.98□□□□□ -0.81
PTP4A1-206ENST00000627002 NPHP3Q7Z494 1330 aa9.98□□□□□ -0.81
PTP4A1-206ENST00000627002 KIF24Q5T7B8 1368 aa9.98□□□□□ -0.81
PTP4A1-206ENST00000627002 PIK3C2AO00443 1686 aa9.97□□□□□ -0.81
PTP4A1-206ENST00000627002 SHPRHQ149N8 1683 aa9.97□□□□□ -0.81
PTP4A1-206ENST00000627002 USP54Q70EL1 1684 aa9.97□□□□□ -0.81
PTP4A1-206ENST00000627002 U2SURPO15042 1029 aaKnown RBP9.97□□□□□ -0.81
PTP4A1-206ENST00000627002 RRS1Q15050 365 aaKnown RBP9.97□□□□□ -0.81
PTP4A1-206ENST00000627002 KCNH5Q8NCM2 988 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms