RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 STK26Q9P289 416 aa10.39□□□□□ -0.75
NPLOC4-221ENST00000625705 TONSLQ96HA7 1378 aa10.39□□□□□ -0.75
NPLOC4-221ENST00000625705 RIOK3O14730 519 aaKnown RBP10.38□□□□□ -0.75
NPLOC4-221ENST00000625705 STAC3Q96MF2 364 aa10.38□□□□□ -0.75
NPLOC4-221ENST00000625705 PTPRUQ92729 1446 aa10.38□□□□□ -0.75
NPLOC4-221ENST00000625705 XIRP1Q702N8 1843 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-221ENST00000625705 ILDR1Q86SU0 546 aaPredicted RBP10.37□□□□□ -0.75
NPLOC4-221ENST00000625705 CCER1Q8TC90 406 aaPredicted RBP10.37□□□□□ -0.75
NPLOC4-221ENST00000625705 ATF3P18847 181 aa10.36□□□□□ -0.75
NPLOC4-221ENST00000625705 CFAP70Q5T0N1 1121 aa10.36□□□□□ -0.75
NPLOC4-221ENST00000625705 TMEM132EQ6IEE7 984 aa10.36□□□□□ -0.75
NPLOC4-221ENST00000625705 C3orf67Q6ZVT6 689 aa10.36□□□□□ -0.75
NPLOC4-221ENST00000625705 NRXN1Q9ULB1 1477 aa10.36□□□□□ -0.75
NPLOC4-221ENST00000625705 EFCAB3Q8N7B9 438 aa10.35□□□□□ -0.75
NPLOC4-221ENST00000625705 PLSCR2Q9NRY7 297 aa10.35□□□□□ -0.75
NPLOC4-221ENST00000625705 KNDC1Q76NI1 1749 aa10.35□□□□□ -0.75
NPLOC4-221ENST00000625705 PTCH1Q13635 1447 aa10.34□□□□□ -0.75
NPLOC4-221ENST00000625705 YTHDC2Q9H6S0 1430 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-221ENST00000625705 ASXL1Q8IXJ9 1541 aa10.34□□□□□ -0.75
NPLOC4-221ENST00000625705 L3MBTL2Q969R5 705 aa10.34□□□□□ -0.75
NPLOC4-221ENST00000625705 C14orf93Q9H972 538 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-221ENST00000625705 LRPPRCP42704 1394 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-221ENST00000625705 NCOA3Q9Y6Q9 1424 aa10.33□□□□□ -0.76
NPLOC4-221ENST00000625705 NALCNQ8IZF0 1738 aa10.33□□□□□ -0.76
NPLOC4-221ENST00000625705 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.33□□□□□ -0.76
NPLOC4-221ENST00000625705 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.33□□□□□ -0.76
NPLOC4-221ENST00000625705 ZFP91Q96JP5 570 aaPredicted RBP10.33□□□□□ -0.76
NPLOC4-221ENST00000625705 ROBO2Q9HCK4 1378 aa10.33□□□□□ -0.76
NPLOC4-221ENST00000625705 ADGRL3Q9HAR2 1447 aa10.33□□□□□ -0.76
NPLOC4-221ENST00000625705 ST18O60284 1047 aa10.32□□□□□ -0.76
NPLOC4-221ENST00000625705 CADPS2Q86UW7 1296 aa10.32□□□□□ -0.76
NPLOC4-221ENST00000625705 C19orf44Q9H6X5 657 aa10.32□□□□□ -0.76
NPLOC4-221ENST00000625705 POGKQ9P215 609 aa10.32□□□□□ -0.76
NPLOC4-221ENST00000625705 KIAA1210Q9ULL0 1709 aa10.32□□□□□ -0.76
NPLOC4-221ENST00000625705 PRAG1Q86YV5 1406 aa10.32□□□□□ -0.76
NPLOC4-221ENST00000625705 SAFB2Q14151 953 aaKnown RBP eCLIP10.31□□□□□ -0.76
NPLOC4-221ENST00000625705 TRAK1Q9UPV9 953 aa10.31□□□□□ -0.76
NPLOC4-221ENST00000625705 DCCP43146 1447 aa10.31□□□□□ -0.76
NPLOC4-221ENST00000625705 ABCC11Q96J66 1382 aa10.3□□□□□ -0.76
NPLOC4-221ENST00000625705 BOLA1Q9Y3E2 137 aa10.3□□□□□ -0.76
NPLOC4-221ENST00000625705 TECPR2O15040 1411 aa10.3□□□□□ -0.76
NPLOC4-221ENST00000625705 CLSPNQ9HAW4 1339 aa10.3□□□□□ -0.76
NPLOC4-221ENST00000625705 ROCK2O75116 1388 aaKnown RBP10.29□□□□□ -0.76
NPLOC4-221ENST00000625705 ROBO1Q9Y6N7 1651 aa10.29□□□□□ -0.76
NPLOC4-221ENST00000625705 WAPLQ7Z5K2 1190 aa10.29□□□□□ -0.76
NPLOC4-221ENST00000625705 PRAM1Q96QH2 718 aa10.29□□□□□ -0.76
NPLOC4-221ENST00000625705 FAM135BQ49AJ0 1406 aa10.29□□□□□ -0.76
NPLOC4-221ENST00000625705 ADGRB1O14514 1584 aa10.29□□□□□ -0.76
NPLOC4-221ENST00000625705 TRPM1Q7Z4N2 1603 aa10.29□□□□□ -0.76
NPLOC4-221ENST00000625705 G3V3G9 751 aa10.28□□□□□ -0.76
NPLOC4-221ENST00000625705 SLAIN2Q9P270 581 aa10.28□□□□□ -0.76
NPLOC4-221ENST00000625705 DLC1Q96QB1 1528 aa10.28□□□□□ -0.76
NPLOC4-221ENST00000625705 PLEKHH1Q9ULM0 1364 aa10.27□□□□□ -0.76
NPLOC4-221ENST00000625705 ARHGEF28Q8N1W1 1705 aaKnown RBP10.27□□□□□ -0.76
NPLOC4-221ENST00000625705 CDC42BPGQ6DT37 1551 aa10.27□□□□□ -0.76
NPLOC4-221ENST00000625705 SNPHO15079 494 aa10.27□□□□□ -0.77
NPLOC4-221ENST00000625705 ECM2O94769 699 aaPredicted RBP10.27□□□□□ -0.77
NPLOC4-221ENST00000625705 PCDH10Q9P2E7 1040 aa10.27□□□□□ -0.77
NPLOC4-221ENST00000625705 NUTM2FA1L443 756 aa10.26□□□□□ -0.77
NPLOC4-221ENST00000625705 MINK1Q8N4C8 1332 aaPredicted RBP10.26□□□□□ -0.77
NPLOC4-221ENST00000625705 EIF3AQ14152 1382 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-221ENST00000625705 PHLPP1O60346 1717 aa10.25□□□□□ -0.77
NPLOC4-221ENST00000625705 HSPA1LP34931 641 aa10.25□□□□□ -0.77
NPLOC4-221ENST00000625705 NBPF1Q3BBV0 1214 aa10.25□□□□□ -0.77
NPLOC4-221ENST00000625705 MST1RQ04912 1400 aa10.24□□□□□ -0.77
NPLOC4-221ENST00000625705 SIRT1Q96EB6 747 aa10.24□□□□□ -0.77
NPLOC4-221ENST00000625705 HIRIP3Q9BW71 556 aaPredicted RBP10.24□□□□□ -0.77
NPLOC4-221ENST00000625705 QRICH2Q9H0J4 1663 aa10.24□□□□□ -0.77
NPLOC4-221ENST00000625705 FMN2Q9NZ56 1722 aa10.24□□□□□ -0.77
NPLOC4-221ENST00000625705 RALGAPBQ86X10 1494 aa10.23□□□□□ -0.77
NPLOC4-221ENST00000625705 SOX12O15370 315 aa10.23□□□□□ -0.77
NPLOC4-221ENST00000625705 CARD11Q9BXL7 1154 aa10.23□□□□□ -0.77
NPLOC4-221ENST00000625705 BCL11BQ9C0K0 894 aaPredicted RBP10.23□□□□□ -0.77
NPLOC4-221ENST00000625705 C1orf167Q5SNV9 1468 aa10.23□□□□□ -0.77
NPLOC4-221ENST00000625705 ADGRB2O60241 1585 aa10.22□□□□□ -0.77
NPLOC4-221ENST00000625705 NBPF8Q3BBV2 869 aa10.22□□□□□ -0.77
NPLOC4-221ENST00000625705 ESCO1Q5FWF5 840 aa10.22□□□□□ -0.77
NPLOC4-221ENST00000625705 PHF8Q9UPP1 1060 aa10.22□□□□□ -0.77
NPLOC4-221ENST00000625705 CENPJQ9HC77 1338 aaPredicted RBP10.22□□□□□ -0.77
NPLOC4-221ENST00000625705 BRINP3Q76B58 766 aa10.21□□□□□ -0.77
NPLOC4-221ENST00000625705 TMEM121BQ9BXQ6 578 aaPredicted RBP10.21□□□□□ -0.77
NPLOC4-221ENST00000625705 TAOK2Q9UL54 1235 aa10.21□□□□□ -0.77
NPLOC4-221ENST00000625705 TIMELESSQ9UNS1 1208 aa10.21□□□□□ -0.77
NPLOC4-221ENST00000625705 KIF1AQ12756 1690 aa10.2□□□□□ -0.78
NPLOC4-221ENST00000625705 CDAN1Q8IWY9 1227 aa10.2□□□□□ -0.78
NPLOC4-221ENST00000625705 MS4A4AQ96JQ5 239 aa10.2□□□□□ -0.78
NPLOC4-221ENST00000625705 STK24Q9Y6E0 443 aa10.2□□□□□ -0.78
NPLOC4-221ENST00000625705 ITSN1Q15811 1721 aa10.19□□□□□ -0.78
NPLOC4-221ENST00000625705 AHDC1Q5TGY3 1603 aaPredicted RBP10.19□□□□□ -0.78
NPLOC4-221ENST00000625705 RGL2O15211 777 aa10.19□□□□□ -0.78
NPLOC4-221ENST00000625705 SRPK2P78362 688 aaKnown RBP10.19□□□□□ -0.78
NPLOC4-221ENST00000625705 MARVELD3Q96A59 401 aa10.19□□□□□ -0.78
NPLOC4-221ENST00000625705 ORAI2Q96SN7 254 aa10.19□□□□□ -0.78
NPLOC4-221ENST00000625705 RGPD8O14715 1765 aaPredicted RBP10.19□□□□□ -0.78
NPLOC4-221ENST00000625705 NHSL1Q5SYE7 1610 aa10.18□□□□□ -0.78
NPLOC4-221ENST00000625705 TULP4Q9NRJ4 1543 aa10.18□□□□□ -0.78
NPLOC4-221ENST00000625705 ANKARQ7Z5J8 1434 aa10.18□□□□□ -0.78
NPLOC4-221ENST00000625705 NPHP3Q7Z494 1330 aa10.18□□□□□ -0.78
NPLOC4-221ENST00000625705 WASLO00401 505 aaPredicted RBP10.18□□□□□ -0.78
NPLOC4-221ENST00000625705 COL16A1Q07092 1604 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms