RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 SPATA31A7Q8IWB4 1347 aa16.27■□□□□ 0.2
DDX41-218ENST00000625286 COL14A1Q05707 1796 aaKnown RBP16.27■□□□□ 0.2
DDX41-218ENST00000625286 NGDNQ8NEJ9 315 aaKnown RBP16.26■□□□□ 0.19
DDX41-218ENST00000625286 PAK3O75914 559 aaPredicted RBP16.25■□□□□ 0.19
DDX41-218ENST00000625286 SF3B2Q13435 895 aaKnown RBP16.25■□□□□ 0.19
DDX41-218ENST00000625286 NUDT16Q96DE0 195 aaKnown RBP16.25■□□□□ 0.19
DDX41-218ENST00000625286 ARHGEF28Q8N1W1 1705 aaKnown RBP16.25■□□□□ 0.19
DDX41-218ENST00000625286 ATP7BP35670 1465 aa16.24■□□□□ 0.19
DDX41-218ENST00000625286 A0A0G2JS52 829 aa16.24■□□□□ 0.19
DDX41-218ENST00000625286 PSDA5PKW4 1024 aaPredicted RBP16.24■□□□□ 0.19
DDX41-218ENST00000625286 MYT1Q01538 1121 aa16.24■□□□□ 0.19
DDX41-218ENST00000625286 CHRNA2Q15822 529 aa16.23■□□□□ 0.19
DDX41-218ENST00000625286 CDK19Q9BWU1 502 aa16.23■□□□□ 0.19
DDX41-218ENST00000625286 THSD7AQ9UPZ6 1657 aa16.23■□□□□ 0.19
DDX41-218ENST00000625286 EN1Q05925 392 aaPredicted RBP16.22■□□□□ 0.19
DDX41-218ENST00000625286 NUTM2GQ5VZR2 741 aa16.22■□□□□ 0.19
DDX41-218ENST00000625286 STAC3Q96MF2 364 aa16.22■□□□□ 0.19
DDX41-218ENST00000625286 EIF3AQ14152 1382 aaKnown RBP16.22■□□□□ 0.19
DDX41-218ENST00000625286 KIAA0232Q92628 1395 aa16.22■□□□□ 0.19
DDX41-218ENST00000625286 HRCP23327 699 aa16.21■□□□□ 0.19
DDX41-218ENST00000625286 PRDM11Q9NQV5 511 aa16.21■□□□□ 0.19
DDX41-218ENST00000625286 SPATA31A1Q5TZJ5 1347 aa16.2■□□□□ 0.18
DDX41-218ENST00000625286 ZC3H6P61129 1189 aaKnown RBP16.2■□□□□ 0.18
DDX41-218ENST00000625286 BAG6P46379 1132 aa16.19■□□□□ 0.18
DDX41-218ENST00000625286 NBPF1Q3BBV0 1214 aa16.19■□□□□ 0.18
DDX41-218ENST00000625286 NBPF8Q3BBV2 869 aa16.19■□□□□ 0.18
DDX41-218ENST00000625286 ACEP12821 1306 aa16.19■□□□□ 0.18
DDX41-218ENST00000625286 POLR3AO14802 1390 aaPredicted RBP16.18■□□□□ 0.18
DDX41-218ENST00000625286 LRP5O75197 1615 aa16.18■□□□□ 0.18
DDX41-218ENST00000625286 PHRF1Q9P1Y6 1649 aaKnown RBP16.18■□□□□ 0.18
DDX41-218ENST00000625286 ITSN1Q15811 1721 aa16.17■□□□□ 0.18
DDX41-218ENST00000625286 TNS1Q9HBL0 1735 aaKnown RBP16.17■□□□□ 0.18
DDX41-218ENST00000625286 PLEKHG3A1L390 1219 aa16.17■□□□□ 0.18
DDX41-218ENST00000625286 STRN4Q9NRL3 753 aa16.17■□□□□ 0.18
DDX41-218ENST00000625286 TOPAZ1Q8N9V7 1692 aa16.17■□□□□ 0.18
DDX41-218ENST00000625286 RGPD1P0DJD0 1748 aa16.16■□□□□ 0.18
DDX41-218ENST00000625286 EZH2Q15910 746 aaKnown RBP16.16■□□□□ 0.18
DDX41-218ENST00000625286 CAMKK2Q96RR4 588 aa16.16■□□□□ 0.18
DDX41-218ENST00000625286 CAMTA1Q9Y6Y1 1673 aa16.15■□□□□ 0.18
DDX41-218ENST00000625286 DISP2A7MBM2 1401 aa16.15■□□□□ 0.18
DDX41-218ENST00000625286 CCDC61Q9Y6R9 512 aa16.15■□□□□ 0.18
DDX41-218ENST00000625286 TRIM37O94972 964 aa16.14■□□□□ 0.17
DDX41-218ENST00000625286 R3HDM1Q15032 1099 aaKnown RBP16.14■□□□□ 0.17
DDX41-218ENST00000625286 USP35Q9P2H5 1018 aa16.14■□□□□ 0.17
DDX41-218ENST00000625286 LARP1Q6PKG0 1096 aaKnown RBP16.13■□□□□ 0.17
DDX41-218ENST00000625286 KIAA1210Q9ULL0 1709 aa16.12■□□□□ 0.17
DDX41-218ENST00000625286 ABTB2Q8N961 1025 aa16.12■□□□□ 0.17
DDX41-218ENST00000625286 USP19O94966 1318 aa16.12■□□□□ 0.17
DDX41-218ENST00000625286 NRKQ7Z2Y5 1582 aa16.12■□□□□ 0.17
DDX41-218ENST00000625286 LMO7Q8WWI1 1683 aa16.11■□□□□ 0.17
DDX41-218ENST00000625286 SSH2Q76I76 1423 aa16.11■□□□□ 0.17
DDX41-218ENST00000625286 FAM196AQ6ZSG2 479 aa16.11■□□□□ 0.17
DDX41-218ENST00000625286 BARGINQ6ZT62 677 aa16.11■□□□□ 0.17
DDX41-218ENST00000625286 CABP2Q9NPB3 220 aa16.1■□□□□ 0.17
DDX41-218ENST00000625286 CPDO75976 1380 aa16.1■□□□□ 0.17
DDX41-218ENST00000625286 APBA3O96018 575 aa16.09■□□□□ 0.17
DDX41-218ENST00000625286 GCP02774 474 aa16.09■□□□□ 0.17
DDX41-218ENST00000625286 EVA1CP58658 441 aa16.09■□□□□ 0.17
DDX41-218ENST00000625286 TCP11L2Q8N4U5 519 aa16.07■□□□□ 0.16
DDX41-218ENST00000625286 PPIP5K1Q6PFW1 1433 aa16.07■□□□□ 0.16
DDX41-218ENST00000625286 SRPK2P78362 688 aaKnown RBP16.06■□□□□ 0.16
DDX41-218ENST00000625286 CABP1Q9NZU7 370 aa16.06■□□□□ 0.16
DDX41-218ENST00000625286 CENPJQ9HC77 1338 aaPredicted RBP16.05■□□□□ 0.16
DDX41-218ENST00000625286 PDE3BQ13370 1112 aa16.05■□□□□ 0.16
DDX41-218ENST00000625286 NLRP13Q86W25 1043 aa16.05■□□□□ 0.16
DDX41-218ENST00000625286 RREB1Q92766 1687 aa16.04■□□□□ 0.16
DDX41-218ENST00000625286 COL5A2P05997 1499 aaPredicted RBP16.03■□□□□ 0.16
DDX41-218ENST00000625286 NUP188Q5SRE5 1749 aa16.02■□□□□ 0.16
DDX41-218ENST00000625286 PTF1AQ7RTS3 328 aa16.02■□□□□ 0.16
DDX41-218ENST00000625286 L3MBTL2Q969R5 705 aa16.02■□□□□ 0.16
DDX41-218ENST00000625286 AXIN2Q9Y2T1 843 aa16.02■□□□□ 0.16
DDX41-218ENST00000625286 THRAP3Q9Y2W1 955 aaKnown RBP16.02■□□□□ 0.16
DDX41-218ENST00000625286 COL18A1P39060 1754 aa16.02■□□□□ 0.15
DDX41-218ENST00000625286 USP6P35125 1406 aa16.02■□□□□ 0.15
DDX41-218ENST00000625286 QRICH2Q9H0J4 1663 aa16.02■□□□□ 0.15
DDX41-218ENST00000625286 NLRP6P59044 892 aa16.01■□□□□ 0.15
DDX41-218ENST00000625286 PEAK1Q9H792 1746 aa16.01■□□□□ 0.15
DDX41-218ENST00000625286 PARP4Q9UKK3 1724 aaKnown RBP16.01■□□□□ 0.15
DDX41-218ENST00000625286 PARD3Q8TEW0 1356 aa16■□□□□ 0.15
DDX41-218ENST00000625286 SLIT3O75094 1523 aa16■□□□□ 0.15
DDX41-218ENST00000625286 AATKQ6ZMQ8 1374 aa16■□□□□ 0.15
DDX41-218ENST00000625286 ZBTB7CA1YPR0 619 aa15.99■□□□□ 0.15
DDX41-218ENST00000625286 SIN3AQ96ST3 1273 aa15.99■□□□□ 0.15
DDX41-218ENST00000625286 CRB1P82279 1406 aa15.99■□□□□ 0.15
DDX41-218ENST00000625286 BRD4O60885 1362 aaPredicted RBP15.99■□□□□ 0.15
DDX41-218ENST00000625286 PIK3C2AO00443 1686 aa15.99■□□□□ 0.15
DDX41-218ENST00000625286 SBF2Q86WG5 1849 aa15.98■□□□□ 0.15
DDX41-218ENST00000625286 RGPD5Q99666 1765 aa15.96■□□□□ 0.15
DDX41-218ENST00000625286 LRRC37A3O60309 1634 aa15.95■□□□□ 0.14
DDX41-218ENST00000625286 ARHGEF25Q86VW2 580 aa15.95■□□□□ 0.14
DDX41-218ENST00000625286 PROM2Q8N271 834 aa15.95■□□□□ 0.14
DDX41-218ENST00000625286 MARCH10Q8NA82 808 aaPredicted RBP15.95■□□□□ 0.14
DDX41-218ENST00000625286 TTC21BQ7Z4L5 1316 aa15.94■□□□□ 0.14
DDX41-218ENST00000625286 TRPM1Q7Z4N2 1603 aa15.94■□□□□ 0.14
DDX41-218ENST00000625286 NBPF14Q5TI25 921 aa15.94■□□□□ 0.14
DDX41-218ENST00000625286 TOM1L2Q6ZVM7 507 aa15.94■□□□□ 0.14
DDX41-218ENST00000625286 EVC2Q86UK5 1308 aa15.94■□□□□ 0.14
DDX41-218ENST00000625286 DDB1Q16531 1140 aa15.93■□□□□ 0.14
DDX41-218ENST00000625286 PDGFDQ9GZP0 370 aaPredicted RBP15.93■□□□□ 0.14
DDX41-218ENST00000625286 ANO8Q9HCE9 1232 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms