RNA–Protein interactions for RNA: ENST00000624909.1

PCDHB9-203, Transcript of protocadherin beta 9, humanhuman

TSL 3

Gene PCDHB9, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-203ENST00000624909 EIF3AQ14152 1382 aaKnown RBP11.48□□□□□ -0.57
PCDHB9-203ENST00000624909 KNDC1Q76NI1 1749 aa11.48□□□□□ -0.57
PCDHB9-203ENST00000624909 STRCP1A6NGW2 1772 aa11.48□□□□□ -0.57
PCDHB9-203ENST00000624909 ROBO2Q9HCK4 1378 aa11.47□□□□□ -0.57
PCDHB9-203ENST00000624909 ATF3P18847 181 aa11.47□□□□□ -0.57
PCDHB9-203ENST00000624909 C14orf37Q86TY3 774 aa11.47□□□□□ -0.57
PCDHB9-203ENST00000624909 STK26Q9P289 416 aa11.47□□□□□ -0.57
PCDHB9-203ENST00000624909 ASXL1Q8IXJ9 1541 aa11.46□□□□□ -0.57
PCDHB9-203ENST00000624909 RALGAPBQ86X10 1494 aa11.46□□□□□ -0.57
PCDHB9-203ENST00000624909 ADGRL3Q9HAR2 1447 aa11.46□□□□□ -0.57
PCDHB9-203ENST00000624909 FBXO41Q8TF61 875 aa11.46□□□□□ -0.57
PCDHB9-203ENST00000624909 POGKQ9P215 609 aa11.46□□□□□ -0.57
PCDHB9-203ENST00000624909 NBPF1Q3BBV0 1214 aa11.45□□□□□ -0.58
PCDHB9-203ENST00000624909 NBPF8Q3BBV2 869 aa11.45□□□□□ -0.58
PCDHB9-203ENST00000624909 TRPM1Q7Z4N2 1603 aa11.45□□□□□ -0.58
PCDHB9-203ENST00000624909 PRAM1Q96QH2 718 aa11.44□□□□□ -0.58
PCDHB9-203ENST00000624909 CARD11Q9BXL7 1154 aa11.44□□□□□ -0.58
PCDHB9-203ENST00000624909 TSHZ2Q9NRE2 1034 aa11.44□□□□□ -0.58
PCDHB9-203ENST00000624909 TRAK1Q9UPV9 953 aa11.44□□□□□ -0.58
PCDHB9-203ENST00000624909 UBAP1LF5GYI3 381 aa11.43□□□□□ -0.58
PCDHB9-203ENST00000624909 SLAIN2Q9P270 581 aa11.43□□□□□ -0.58
PCDHB9-203ENST00000624909 EVX2Q03828 476 aa11.42□□□□□ -0.58
PCDHB9-203ENST00000624909 WAPLQ7Z5K2 1190 aa11.42□□□□□ -0.58
PCDHB9-203ENST00000624909 SBNO2Q9Y2G9 1366 aa11.41□□□□□ -0.58
PCDHB9-203ENST00000624909 CENPJQ9HC77 1338 aaPredicted RBP11.41□□□□□ -0.58
PCDHB9-203ENST00000624909 MS4A3Q96HJ5 214 aa11.41□□□□□ -0.58
PCDHB9-203ENST00000624909 CDC42BPGQ6DT37 1551 aa11.41□□□□□ -0.58
PCDHB9-203ENST00000624909 XIRP1Q702N8 1843 aaKnown RBP11.4□□□□□ -0.58
PCDHB9-203ENST00000624909 ZEB1P37275 1124 aaPredicted RBP11.4□□□□□ -0.58
PCDHB9-203ENST00000624909 CLCN6P51797 869 aa11.4□□□□□ -0.58
PCDHB9-203ENST00000624909 ADGRB2O60241 1585 aa11.39□□□□□ -0.59
PCDHB9-203ENST00000624909 PUS7Q96PZ0 661 aaKnown RBP11.39□□□□□ -0.59
PCDHB9-203ENST00000624909 CABP2Q9NPB3 220 aa11.39□□□□□ -0.59
PCDHB9-203ENST00000624909 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.38□□□□□ -0.59
PCDHB9-203ENST00000624909 ANKARQ7Z5J8 1434 aa11.38□□□□□ -0.59
PCDHB9-203ENST00000624909 WASLO00401 505 aaPredicted RBP11.38□□□□□ -0.59
PCDHB9-203ENST00000624909 RBM33Q96EV2 1170 aaKnown RBP11.38□□□□□ -0.59
PCDHB9-203ENST00000624909 PLEKHH1Q9ULM0 1364 aa11.38□□□□□ -0.59
PCDHB9-203ENST00000624909 ARHGEF28Q8N1W1 1705 aaKnown RBP11.37□□□□□ -0.59
PCDHB9-203ENST00000624909 EVC2Q86UK5 1308 aa11.36□□□□□ -0.59
PCDHB9-203ENST00000624909 MST1RQ04912 1400 aa11.36□□□□□ -0.59
PCDHB9-203ENST00000624909 NALCNQ8IZF0 1738 aa11.36□□□□□ -0.59
PCDHB9-203ENST00000624909 SOX12O15370 315 aa11.36□□□□□ -0.59
PCDHB9-203ENST00000624909 CDCA8Q53HL2 280 aa11.36□□□□□ -0.59
PCDHB9-203ENST00000624909 EIF4G2P78344 907 aaKnown RBP eCLIP11.35□□□□□ -0.59
PCDHB9-203ENST00000624909 EFCAB3Q8N7B9 438 aa11.35□□□□□ -0.59
PCDHB9-203ENST00000624909 TMEM106CQ9BVX2 250 aa11.35□□□□□ -0.59
PCDHB9-203ENST00000624909 USP47Q96K76 1375 aa11.35□□□□□ -0.59
PCDHB9-203ENST00000624909 C1orf167Q5SNV9 1468 aa11.35□□□□□ -0.59
PCDHB9-203ENST00000624909 MINK1Q8N4C8 1332 aaPredicted RBP11.35□□□□□ -0.59
PCDHB9-203ENST00000624909 SAFB2Q14151 953 aaKnown RBP eCLIP11.34□□□□□ -0.59
PCDHB9-203ENST00000624909 MFRPQ9BY79 579 aa11.34□□□□□ -0.59
PCDHB9-203ENST00000624909 TIE1P35590 1138 aa11.33□□□□□ -0.6
PCDHB9-203ENST00000624909 PIP4K2BP78356 416 aa11.33□□□□□ -0.6
PCDHB9-203ENST00000624909 GOLGA2Q08379 1002 aa11.33□□□□□ -0.6
PCDHB9-203ENST00000624909 CDK19Q9BWU1 502 aa11.33□□□□□ -0.6
PCDHB9-203ENST00000624909 TULP4Q9NRJ4 1543 aa11.33□□□□□ -0.6
PCDHB9-203ENST00000624909 ST20-MTHFSA0A0A6YYL1 179 aa11.32□□□□□ -0.6
PCDHB9-203ENST00000624909 NLRP6P59044 892 aa11.32□□□□□ -0.6
PCDHB9-203ENST00000624909 BRINP3Q76B58 766 aa11.32□□□□□ -0.6
PCDHB9-203ENST00000624909 TRPC6Q9Y210 931 aa11.32□□□□□ -0.6
PCDHB9-203ENST00000624909 NPHP3Q7Z494 1330 aa11.32□□□□□ -0.6
PCDHB9-203ENST00000624909 ATAD2Q6PL18 1390 aa11.31□□□□□ -0.6
PCDHB9-203ENST00000624909 NINLQ9Y2I6 1382 aa11.31□□□□□ -0.6
PCDHB9-203ENST00000624909 SRPK2P78362 688 aaKnown RBP11.31□□□□□ -0.6
PCDHB9-203ENST00000624909 TMF1P82094 1093 aa11.31□□□□□ -0.6
PCDHB9-203ENST00000624909 ESCO1Q5FWF5 840 aa11.31□□□□□ -0.6
PCDHB9-203ENST00000624909 NUDT16Q96DE0 195 aaKnown RBP11.31□□□□□ -0.6
PCDHB9-203ENST00000624909 TESK2Q96S53 571 aa11.31□□□□□ -0.6
PCDHB9-203ENST00000624909 HIRIP3Q9BW71 556 aaPredicted RBP11.31□□□□□ -0.6
PCDHB9-203ENST00000624909 FMN2Q9NZ56 1722 aa11.31□□□□□ -0.6
PCDHB9-203ENST00000624909 QRICH2Q9H0J4 1663 aa11.3□□□□□ -0.6
PCDHB9-203ENST00000624909 BRD4O60885 1362 aaPredicted RBP11.3□□□□□ -0.6
PCDHB9-203ENST00000624909 PLEKHG3A1L390 1219 aa11.3□□□□□ -0.6
PCDHB9-203ENST00000624909 PSME1Q06323 249 aa11.3□□□□□ -0.6
PCDHB9-203ENST00000624909 PHF8Q9UPP1 1060 aa11.3□□□□□ -0.6
PCDHB9-203ENST00000624909 AHDC1Q5TGY3 1603 aaPredicted RBP11.29□□□□□ -0.6
PCDHB9-203ENST00000624909 LRRC59Q96AG4 307 aaKnown RBP11.29□□□□□ -0.6
PCDHB9-203ENST00000624909 KIF1AQ12756 1690 aa11.29□□□□□ -0.6
PCDHB9-203ENST00000624909 ROBO1Q9Y6N7 1651 aa11.29□□□□□ -0.6
PCDHB9-203ENST00000624909 GALR2O43603 387 aaPredicted RBP11.28□□□□□ -0.6
PCDHB9-203ENST00000624909 ORAI2Q96SN7 254 aa11.28□□□□□ -0.6
PCDHB9-203ENST00000624909 SOS2Q07890 1332 aaPredicted RBP11.28□□□□□ -0.6
PCDHB9-203ENST00000624909 ATP7BP35670 1465 aa11.27□□□□□ -0.6
PCDHB9-203ENST00000624909 MKRN3Q13064 507 aaKnown RBP11.27□□□□□ -0.61
PCDHB9-203ENST00000624909 ILDR1Q86SU0 546 aaPredicted RBP11.27□□□□□ -0.61
PCDHB9-203ENST00000624909 FBXO22Q8NEZ5 403 aa11.27□□□□□ -0.61
PCDHB9-203ENST00000624909 POLR3AO14802 1390 aaPredicted RBP11.27□□□□□ -0.61
PCDHB9-203ENST00000624909 ITSN1Q15811 1721 aa11.26□□□□□ -0.61
PCDHB9-203ENST00000624909 TTLL13PA6NNM8 815 aa11.26□□□□□ -0.61
PCDHB9-203ENST00000624909 NGDNQ8NEJ9 315 aaKnown RBP11.26□□□□□ -0.61
PCDHB9-203ENST00000624909 PRR36Q9H6K5 1346 aa11.26□□□□□ -0.61
PCDHB9-203ENST00000624909 FOXO3O43524 673 aa11.25□□□□□ -0.61
PCDHB9-203ENST00000624909 HSPA5P11021 654 aaKnown RBP11.25□□□□□ -0.61
PCDHB9-203ENST00000624909 HSPA1LP34931 641 aa11.25□□□□□ -0.61
PCDHB9-203ENST00000624909 BMP2KQ9NSY1 1161 aaPredicted RBP11.25□□□□□ -0.61
PCDHB9-203ENST00000624909 SBNO1A3KN83 1393 aa11.25□□□□□ -0.61
PCDHB9-203ENST00000624909 NHSL1Q5SYE7 1610 aa11.24□□□□□ -0.61
PCDHB9-203ENST00000624909 NUTM2FA1L443 756 aa11.24□□□□□ -0.61
PCDHB9-203ENST00000624909 TERF2IPQ9NYB0 399 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms