RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 SLC24A1O60721 1099 aa17.69■□□□□ 0.42
LINC00963-217ENST00000624009 QTRT2Q9H974 415 aaKnown RBP17.69■□□□□ 0.42
LINC00963-217ENST00000624009 USP21Q9UK80 565 aa17.69■□□□□ 0.42
LINC00963-217ENST00000624009 ATRNO75882 1429 aa17.69■□□□□ 0.42
LINC00963-217ENST00000624009 PPIP5K1Q6PFW1 1433 aa17.69■□□□□ 0.42
LINC00963-217ENST00000624009 ACEP12821 1306 aa17.69■□□□□ 0.42
LINC00963-217ENST00000624009 PLCH1Q4KWH8 1693 aa17.67■□□□□ 0.42
LINC00963-217ENST00000624009 ATAD2Q6PL18 1390 aa17.66■□□□□ 0.42
LINC00963-217ENST00000624009 PUS7Q96PZ0 661 aaKnown RBP17.66■□□□□ 0.42
LINC00963-217ENST00000624009 PCGF6Q9BYE7 350 aa17.66■□□□□ 0.42
LINC00963-217ENST00000624009 CABP2Q9NPB3 220 aa17.66■□□□□ 0.42
LINC00963-217ENST00000624009 HAP1P54257 671 aaPredicted RBP17.65■□□□□ 0.42
LINC00963-217ENST00000624009 LMOD2Q6P5Q4 547 aa17.65■□□□□ 0.42
LINC00963-217ENST00000624009 AKAP12Q02952 1782 aa17.65■□□□□ 0.42
LINC00963-217ENST00000624009 COL14A1Q05707 1796 aaKnown RBP17.65■□□□□ 0.42
LINC00963-217ENST00000624009 UNC5CLQ8IV45 518 aa17.64■□□□□ 0.41
LINC00963-217ENST00000624009 PHRF1Q9P1Y6 1649 aaKnown RBP17.63■□□□□ 0.41
LINC00963-217ENST00000624009 PAK3O75914 559 aaPredicted RBP17.63■□□□□ 0.41
LINC00963-217ENST00000624009 ZNF692Q9BU19 519 aaPredicted RBP17.63■□□□□ 0.41
LINC00963-217ENST00000624009 USP6P35125 1406 aa17.63■□□□□ 0.41
LINC00963-217ENST00000624009 EP400Q96L91 3159 aa17.62■□□□□ 0.41
LINC00963-217ENST00000624009 CABLES1Q8TDN4 633 aa17.62■□□□□ 0.41
LINC00963-217ENST00000624009 CABP1Q9NZU7 370 aa17.62■□□□□ 0.41
LINC00963-217ENST00000624009 RGS12O14924 1447 aa17.61■□□□□ 0.41
LINC00963-217ENST00000624009 SSH2Q76I76 1423 aa17.61■□□□□ 0.41
LINC00963-217ENST00000624009 USP19O94966 1318 aa17.6■□□□□ 0.41
LINC00963-217ENST00000624009 NRAPQ86VF7 1730 aa17.6■□□□□ 0.41
LINC00963-217ENST00000624009 CPSF1Q10570 1443 aaKnown RBP17.59■□□□□ 0.41
LINC00963-217ENST00000624009 GJD4Q96KN9 370 aaPredicted RBP17.59■□□□□ 0.41
LINC00963-217ENST00000624009 MON2Q7Z3U7 1717 aa17.58■□□□□ 0.41
LINC00963-217ENST00000624009 FAM83GA6ND36 823 aa17.58■□□□□ 0.4
LINC00963-217ENST00000624009 VPS72Q15906 364 aa17.58■□□□□ 0.4
LINC00963-217ENST00000624009 ABTB2Q8N961 1025 aa17.58■□□□□ 0.4
LINC00963-217ENST00000624009 CPDO75976 1380 aa17.57■□□□□ 0.4
LINC00963-217ENST00000624009 NINLQ9Y2I6 1382 aa17.57■□□□□ 0.4
LINC00963-217ENST00000624009 NLRP13Q86W25 1043 aa17.57■□□□□ 0.4
LINC00963-217ENST00000624009 TESK2Q96S53 571 aa17.57■□□□□ 0.4
LINC00963-217ENST00000624009 GLI3P10071 1580 aa17.57■□□□□ 0.4
LINC00963-217ENST00000624009 NRKQ7Z2Y5 1582 aa17.57■□□□□ 0.4
LINC00963-217ENST00000624009 TTC21AQ8NDW8 1320 aa17.55■□□□□ 0.4
LINC00963-217ENST00000624009 PIK3C2AO00443 1686 aa17.55■□□□□ 0.4
LINC00963-217ENST00000624009 USP54Q70EL1 1684 aa17.55■□□□□ 0.4
LINC00963-217ENST00000624009 SLIT3O75094 1523 aa17.54■□□□□ 0.4
LINC00963-217ENST00000624009 ST20-MTHFSA0A0A6YYL1 179 aa17.54■□□□□ 0.4
LINC00963-217ENST00000624009 ONECUT3O60422 494 aaPredicted RBP17.54■□□□□ 0.4
LINC00963-217ENST00000624009 PRDM11Q9NQV5 511 aa17.54■□□□□ 0.4
LINC00963-217ENST00000624009 USP47Q96K76 1375 aa17.53■□□□□ 0.4
LINC00963-217ENST00000624009 KIAA0232Q92628 1395 aa17.53■□□□□ 0.4
LINC00963-217ENST00000624009 BTG4Q9NY30 223 aa17.52■□□□□ 0.4
LINC00963-217ENST00000624009 KTN1Q86UP2 1357 aaKnown RBP17.52■□□□□ 0.39
LINC00963-217ENST00000624009 LMO7Q8WWI1 1683 aa17.52■□□□□ 0.39
LINC00963-217ENST00000624009 TTC21BQ7Z4L5 1316 aa17.51■□□□□ 0.39
LINC00963-217ENST00000624009 CD163L1Q9NR16 1453 aa17.51■□□□□ 0.39
LINC00963-217ENST00000624009 CCER1Q8TC90 406 aaPredicted RBP17.51■□□□□ 0.39
LINC00963-217ENST00000624009 BRWD3Q6RI45 1802 aa17.5■□□□□ 0.39
LINC00963-217ENST00000624009 GCP02774 474 aa17.5■□□□□ 0.39
LINC00963-217ENST00000624009 UPF1Q92900 1129 aaKnown RBP eCLIP17.5■□□□□ 0.392e-6■■■□□ 15.7
LINC00963-217ENST00000624009 NLRP6P59044 892 aa17.49■□□□□ 0.39
LINC00963-217ENST00000624009 CDCA8Q53HL2 280 aa17.49■□□□□ 0.39
LINC00963-217ENST00000624009 NUTM2GQ5VZR2 741 aa17.49■□□□□ 0.39
LINC00963-217ENST00000624009 TERF2IPQ9NYB0 399 aa17.49■□□□□ 0.39
LINC00963-217ENST00000624009 EDC4Q6P2E9 1401 aaKnown RBP17.48■□□□□ 0.39
LINC00963-217ENST00000624009 ABCC6O95255 1503 aa17.48■□□□□ 0.39
LINC00963-217ENST00000624009 PLEKHG5O94827 1062 aa17.48■□□□□ 0.39
LINC00963-217ENST00000624009 HDGFL2Q7Z4V5 671 aaPredicted RBP17.48■□□□□ 0.39
LINC00963-217ENST00000624009 KCNH5Q8NCM2 988 aa17.48■□□□□ 0.39
LINC00963-217ENST00000624009 USP31Q70CQ4 1352 aa17.48■□□□□ 0.39
LINC00963-217ENST00000624009 SPATA31A5Q5VU36 1347 aa17.47■□□□□ 0.39
LINC00963-217ENST00000624009 SPATA31A7Q8IWB4 1347 aa17.47■□□□□ 0.39
LINC00963-217ENST00000624009 TMF1P82094 1093 aa17.47■□□□□ 0.39
LINC00963-217ENST00000624009 AATKQ6ZMQ8 1374 aa17.46■□□□□ 0.39
LINC00963-217ENST00000624009 ZC3H6P61129 1189 aaKnown RBP17.46■□□□□ 0.39
LINC00963-217ENST00000624009 COL18A1P39060 1754 aa17.45■□□□□ 0.38
LINC00963-217ENST00000624009 CAMTA1Q9Y6Y1 1673 aa17.45■□□□□ 0.38
LINC00963-217ENST00000624009 CCDC125Q86Z20 511 aa17.45■□□□□ 0.38
LINC00963-217ENST00000624009 SLC12A5Q9H2X9 1139 aa17.45■□□□□ 0.38
LINC00963-217ENST00000624009 THSD7AQ9UPZ6 1657 aa17.45■□□□□ 0.38
LINC00963-217ENST00000624009 A0A1W2PP64 1363 aa17.44■□□□□ 0.38
LINC00963-217ENST00000624009 TMC1Q8TDI8 760 aa17.44■□□□□ 0.38
LINC00963-217ENST00000624009 CCDC9Q9Y3X0 531 aaKnown RBP17.44■□□□□ 0.38
LINC00963-217ENST00000624009 SPATA31A1Q5TZJ5 1347 aa17.44■□□□□ 0.38
LINC00963-217ENST00000624009 NFAT5O94916 1531 aa17.43■□□□□ 0.38
LINC00963-217ENST00000624009 CHRNA2Q15822 529 aa17.43■□□□□ 0.38
LINC00963-217ENST00000624009 SEPT12Q8IYM1 358 aa17.43■□□□□ 0.38
LINC00963-217ENST00000624009 ANKRD36BQ8N2N9 1353 aa17.42■□□□□ 0.38
LINC00963-217ENST00000624009 BARGINQ6ZT62 677 aa17.41■□□□□ 0.38
LINC00963-217ENST00000624009 COL5A2P05997 1499 aaPredicted RBP17.41■□□□□ 0.38
LINC00963-217ENST00000624009 ARHGEF25Q86VW2 580 aa17.4■□□□□ 0.38
LINC00963-217ENST00000624009 THRAP3Q9Y2W1 955 aaKnown RBP17.4■□□□□ 0.38
LINC00963-217ENST00000624009 LTN1O94822 1766 aa17.39■□□□□ 0.37
LINC00963-217ENST00000624009 EVA1CP58658 441 aa17.39■□□□□ 0.37
LINC00963-217ENST00000624009 OVOS2A0A0J9YW53 1432 aa17.38■□□□□ 0.37
LINC00963-217ENST00000624009 OVOS2Q6IE36 1432 aa17.38■□□□□ 0.37
LINC00963-217ENST00000624009 RGPD5Q99666 1765 aa17.38■□□□□ 0.37
LINC00963-217ENST00000624009 FAM98CQ17RN3 349 aaKnown RBP17.38■□□□□ 0.37
LINC00963-217ENST00000624009 KRT27Q7Z3Y8 459 aa17.38■□□□□ 0.37
LINC00963-217ENST00000624009 CRB1P82279 1406 aa17.38■□□□□ 0.37
LINC00963-217ENST00000624009 MYOM1P52179 1685 aa17.37■□□□□ 0.37
LINC00963-217ENST00000624009 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.37■□□□□ 0.37
LINC00963-217ENST00000624009 STRN4Q9NRL3 753 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms