RNA–Protein interactions for RNA: ENST00000623527.3

CDHR1-206, Transcript of cadherin related family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDHR1, Length 6,781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1-206ENST00000623527 UQCRHLA0A096LP55 91 aa12.97□□□□□ -0.33
CDHR1-206ENST00000623527 UQCRHP07919 91 aa12.97□□□□□ -0.33
CDHR1-206ENST00000623527 STK38Q15208 465 aa12.97□□□□□ -0.33
CDHR1-206ENST00000623527 HSP90AB4PQ58FF6 505 aa12.97□□□□□ -0.33
CDHR1-206ENST00000623527 CWC22Q9HCG8 908 aaKnown RBP12.97□□□□□ -0.33
CDHR1-206ENST00000623527 CLASRPQ8N2M8 674 aaKnown RBP12.97□□□□□ -0.33
CDHR1-206ENST00000623527 TSR2Q969E8 191 aaKnown RBP12.97□□□□□ -0.33
CDHR1-206ENST00000623527 TMEM132EQ6IEE7 984 aa12.97□□□□□ -0.33
CDHR1-206ENST00000623527 ERCC4Q92889 916 aaPredicted RBP12.97□□□□□ -0.33
CDHR1-206ENST00000623527 IBSPP21815 317 aaPredicted RBP12.97□□□□□ -0.33
CDHR1-206ENST00000623527 PSMA5P28066 241 aa12.96□□□□□ -0.33
CDHR1-206ENST00000623527 EXOSC9Q06265 439 aaKnown RBP12.96□□□□□ -0.33
CDHR1-206ENST00000623527 MTHFSP49914 203 aa12.96□□□□□ -0.33
CDHR1-206ENST00000623527 MBD3O95983 291 aa12.96□□□□□ -0.33
CDHR1-206ENST00000623527 TCP11L2Q8N4U5 519 aa12.96□□□□□ -0.33
CDHR1-206ENST00000623527 PAF1Q8N7H5 531 aa12.96□□□□□ -0.33
CDHR1-206ENST00000623527 PRDM10Q9NQV6 1147 aa12.96□□□□□ -0.33
CDHR1-206ENST00000623527 CCDC7Q96M83 1385 aa12.96□□□□□ -0.33
CDHR1-206ENST00000623527 MTERF4Q7Z6M4 381 aaKnown RBP12.96□□□□□ -0.33
CDHR1-206ENST00000623527 ZHX3Q9H4I2 956 aa12.96□□□□□ -0.33
CDHR1-206ENST00000623527 TAX1BP1Q86VP1 789 aa12.96□□□□□ -0.34
CDHR1-206ENST00000623527 SIL1Q9H173 461 aa12.96□□□□□ -0.34
CDHR1-206ENST00000623527 NLRP2Q9NX02 1062 aa12.96□□□□□ -0.34
CDHR1-206ENST00000623527 FILIP1LQ4L180 1135 aa12.95□□□□□ -0.34
CDHR1-206ENST00000623527 XBP1P17861 261 aa12.95□□□□□ -0.34
CDHR1-206ENST00000623527 GRPEL1Q9HAV7 217 aa12.95□□□□□ -0.34
CDHR1-206ENST00000623527 FILIP1Q7Z7B0 1213 aa12.95□□□□□ -0.34
CDHR1-206ENST00000623527 ME1P48163 572 aa12.95□□□□□ -0.34
CDHR1-206ENST00000623527 CCDC112Q8NEF3 446 aa12.95□□□□□ -0.34
CDHR1-206ENST00000623527 TMEM132AQ24JP5 1023 aa12.94□□□□□ -0.34
CDHR1-206ENST00000623527 MAGEC2Q9UBF1 373 aaPredicted RBP12.94□□□□□ -0.34
CDHR1-206ENST00000623527 RAPGEF4Q8WZA2 1011 aa12.94□□□□□ -0.34
CDHR1-206ENST00000623527 SMARCE1Q969G3 411 aa12.94□□□□□ -0.34
CDHR1-206ENST00000623527 CDK5RAP3Q96JB5 506 aa12.94□□□□□ -0.34
CDHR1-206ENST00000623527 BACH2Q9BYV9 841 aa12.94□□□□□ -0.34
CDHR1-206ENST00000623527 TNMDQ9H2S6 317 aa12.94□□□□□ -0.34
CDHR1-206ENST00000623527 NINLQ9Y2I6 1382 aa12.94□□□□□ -0.34
CDHR1-206ENST00000623527 CNTLNQ9NXG0 1405 aa12.94□□□□□ -0.34
CDHR1-206ENST00000623527 KRT18P05783 430 aaKnown RBP12.93□□□□□ -0.34
CDHR1-206ENST00000623527 ATP2B2Q01814 1243 aa12.93□□□□□ -0.34
CDHR1-206ENST00000623527 CCDC18Q5T9S5 1454 aa12.93□□□□□ -0.34
CDHR1-206ENST00000623527 HMGN5P82970 282 aaKnown RBP12.93□□□□□ -0.34
CDHR1-206ENST00000623527 NOB1Q9ULX3 412 aaKnown RBP12.93□□□□□ -0.34
CDHR1-206ENST00000623527 ENOX2Q16206 610 aaKnown RBP12.92□□□□□ -0.34
CDHR1-206ENST00000623527 SKAP1Q86WV1 359 aa12.92□□□□□ -0.34
CDHR1-206ENST00000623527 TANGO6Q9C0B7 1094 aa12.92□□□□□ -0.34
CDHR1-206ENST00000623527 DEF6Q9H4E7 631 aa12.92□□□□□ -0.34
CDHR1-206ENST00000623527 LETM1O95202 739 aaPredicted RBP12.92□□□□□ -0.34
CDHR1-206ENST00000623527 LRRFIP2Q9Y608 721 aaKnown RBP12.92□□□□□ -0.34
CDHR1-206ENST00000623527 TAF3Q5VWG9 929 aa12.91□□□□□ -0.34
CDHR1-206ENST00000623527 CCDC192P0DO97 292 aa12.91□□□□□ -0.34
CDHR1-206ENST00000623527 PIBF1Q8WXW3 757 aa12.91□□□□□ -0.34
CDHR1-206ENST00000623527 CCDC181Q5TID7 509 aa12.91□□□□□ -0.34
CDHR1-206ENST00000623527 TRERF1Q96PN7 1200 aa12.91□□□□□ -0.34
CDHR1-206ENST00000623527 SART3Q15020 963 aaKnown RBP12.91□□□□□ -0.34
CDHR1-206ENST00000623527 CCAR1Q8IX12 1150 aaKnown RBP12.91□□□□□ -0.34
CDHR1-206ENST00000623527 PRKAR2BP31323 418 aa12.91□□□□□ -0.34
CDHR1-206ENST00000623527 RABEP1Q15276 862 aa12.91□□□□□ -0.34
CDHR1-206ENST00000623527 KIAA0754O94854 1291 aa12.9□□□□□ -0.34
CDHR1-206ENST00000623527 SYCP1Q15431 976 aa12.9□□□□□ -0.34
CDHR1-206ENST00000623527 PPFIBP1Q86W92 1011 aa12.9□□□□□ -0.34
CDHR1-206ENST00000623527 RSPH4AQ5TD94 716 aa12.9□□□□□ -0.34
CDHR1-206ENST00000623527 PDCP20941 246 aa12.9□□□□□ -0.34
CDHR1-206ENST00000623527 PDCL3Q9H2J4 239 aa12.9□□□□□ -0.34
CDHR1-206ENST00000623527 CCDC102AQ96A19 550 aa12.89□□□□□ -0.35
CDHR1-206ENST00000623527 TBC1D2BQ9UPU7 963 aa12.89□□□□□ -0.35
CDHR1-206ENST00000623527 NLRP6P59044 892 aa12.89□□□□□ -0.35
CDHR1-206ENST00000623527 NUP133Q8WUM0 1156 aa12.89□□□□□ -0.35
CDHR1-206ENST00000623527 TWISTNBQ3B726 338 aaPredicted RBP12.89□□□□□ -0.35
CDHR1-206ENST00000623527 LARP1BQ659C4 914 aaKnown RBP12.89□□□□□ -0.35
CDHR1-206ENST00000623527 ZNHIT6Q9NWK9 470 aaKnown RBP12.89□□□□□ -0.35
CDHR1-206ENST00000623527 MYO6Q9UM54 1294 aa12.89□□□□□ -0.35
CDHR1-206ENST00000623527 ZNF644Q9H582 1327 aaPredicted RBP12.89□□□□□ -0.35
CDHR1-206ENST00000623527 GOLGA6L10A6NI86 522 aa12.89□□□□□ -0.35
CDHR1-206ENST00000623527 JPH4Q96JJ6 628 aa12.89□□□□□ -0.35
CDHR1-206ENST00000623527 ESPNB1AK53 854 aa12.89□□□□□ -0.35
CDHR1-206ENST00000623527 TXLNAP40222 546 aa12.89□□□□□ -0.35
CDHR1-206ENST00000623527 CAMK4Q16566 473 aa12.89□□□□□ -0.35
CDHR1-206ENST00000623527 ZNF396Q96N95 335 aaPredicted RBP12.89□□□□□ -0.35
CDHR1-206ENST00000623527 SEPT11Q9NVA2 429 aaKnown RBP12.88□□□□□ -0.35
CDHR1-206ENST00000623527 K7ELQ4 463 aaPredicted RBP12.88□□□□□ -0.35
CDHR1-206ENST00000623527 SLC4A2P04920 1241 aa12.88□□□□□ -0.35
CDHR1-206ENST00000623527 CBX1P83916 185 aa12.88□□□□□ -0.35
CDHR1-206ENST00000623527 SEPT7Q16181 437 aaKnown RBP12.88□□□□□ -0.35
CDHR1-206ENST00000623527 PODXL2Q9NZ53 605 aa12.88□□□□□ -0.35
CDHR1-206ENST00000623527 CYP46A1Q9Y6A2 500 aa12.88□□□□□ -0.35
CDHR1-206ENST00000623527 GNAI3P08754 354 aa12.88□□□□□ -0.35
CDHR1-206ENST00000623527 RBM42Q9BTD8 480 aaKnown RBP12.87□□□□□ -0.35
CDHR1-206ENST00000623527 SPINK5Q9NQ38 1064 aaPredicted RBP12.87□□□□□ -0.35
CDHR1-206ENST00000623527 SSBP05455 408 aaKnown RBP eCLIP12.87□□□□□ -0.35
CDHR1-206ENST00000623527 UACAQ9BZF9 1416 aa12.87□□□□□ -0.35
CDHR1-206ENST00000623527 SYCE3A1L190 88 aa12.87□□□□□ -0.35
CDHR1-206ENST00000623527 KIF21BO75037 1637 aa12.87□□□□□ -0.35
CDHR1-206ENST00000623527 TOP2AP11388 1531 aaKnown RBP12.87□□□□□ -0.35
CDHR1-206ENST00000623527 FERMT3Q86UX7 667 aa12.87□□□□□ -0.35
CDHR1-206ENST00000623527 IL1RAPL2Q9NP60 686 aa12.87□□□□□ -0.35
CDHR1-206ENST00000623527 DDX11Q96FC9 970 aa12.86□□□□□ -0.35
CDHR1-206ENST00000623527 CCDC30Q5VVM6 783 aa12.86□□□□□ -0.35
CDHR1-206ENST00000623527 DDX54Q8TDD1 881 aaKnown RBP12.86□□□□□ -0.35
CDHR1-206ENST00000623527 CCP110O43303 1012 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms