RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 GGNBP2Q9H3C7 697 aa20.12■□□□□ 0.81
ATRX-211ENST00000623321 NUDCQ9Y266 331 aa20.12■□□□□ 0.81
ATRX-211ENST00000623321 RGPD8O14715 1765 aaPredicted RBP20.12■□□□□ 0.81
ATRX-211ENST00000623321 NCOA3Q9Y6Q9 1424 aa20.11■□□□□ 0.81
ATRX-211ENST00000623321 C19orf44Q9H6X5 657 aa20.11■□□□□ 0.81
ATRX-211ENST00000623321 POLR3AO14802 1390 aaPredicted RBP20.1■□□□□ 0.81
ATRX-211ENST00000623321 PMFBP1Q8TBY8 1022 aa20.1■□□□□ 0.81
ATRX-211ENST00000623321 DMRT2Q9Y5R5 561 aa20.1■□□□□ 0.81
ATRX-211ENST00000623321 KIF20BQ96Q89 1820 aa20.1■□□□□ 0.81
ATRX-211ENST00000623321 ANKRD26Q9UPS8 1709 aa20.09■□□□□ 0.81
ATRX-211ENST00000623321 TMEM94Q12767 1356 aa20.09■□□□□ 0.81
ATRX-211ENST00000623321 TNNT2P45379 298 aaPredicted RBP20.09■□□□□ 0.81
ATRX-211ENST00000623321 NGDNQ8NEJ9 315 aaKnown RBP20.09■□□□□ 0.81
ATRX-211ENST00000623321 USP6P35125 1406 aa20.08■□□□□ 0.81
ATRX-211ENST00000623321 TTC21BQ7Z4L5 1316 aa20.06■□□□□ 0.8
ATRX-211ENST00000623321 NME9Q86XW9 330 aa20.05■□□□□ 0.8
ATRX-211ENST00000623321 PHF8Q9UPP1 1060 aa20.05■□□□□ 0.8
ATRX-211ENST00000623321 NRKQ7Z2Y5 1582 aa20.05■□□□□ 0.8
ATRX-211ENST00000623321 SSH2Q76I76 1423 aa20.05■□□□□ 0.8
ATRX-211ENST00000623321 MSH5O43196 834 aa20.04■□□□□ 0.8
ATRX-211ENST00000623321 B4GALNT3Q6L9W6 998 aa20.04■□□□□ 0.8
ATRX-211ENST00000623321 ZNF335Q9H4Z2 1342 aaPredicted RBP20.04■□□□□ 0.8
ATRX-211ENST00000623321 MTHFSP49914 203 aa20.03■□□□□ 0.8
ATRX-211ENST00000623321 ESCO1Q5FWF5 840 aa20.03■□□□□ 0.8
ATRX-211ENST00000623321 DCCP43146 1447 aa20.03■□□□□ 0.8
ATRX-211ENST00000623321 ATF3P18847 181 aa20.03■□□□□ 0.8
ATRX-211ENST00000623321 TTC21AQ8NDW8 1320 aa20.02■□□□□ 0.8
ATRX-211ENST00000623321 COG3Q96JB2 828 aa20.02■□□□□ 0.8
ATRX-211ENST00000623321 INSRP06213 1382 aa20.01■□□□□ 0.79
ATRX-211ENST00000623321 WDR43Q15061 677 aaKnown RBP eCLIP20■□□□□ 0.79
ATRX-211ENST00000623321 CADPS2Q86UW7 1296 aa20■□□□□ 0.79
ATRX-211ENST00000623321 CFAP53Q96M91 514 aa20■□□□□ 0.79
ATRX-211ENST00000623321 ZRANB1Q9UGI0 708 aa20■□□□□ 0.79
ATRX-211ENST00000623321 LRRC7Q96NW7 1537 aa20■□□□□ 0.79
ATRX-211ENST00000623321 MSH6P52701 1360 aa19.99■□□□□ 0.79
ATRX-211ENST00000623321 C1orf167Q5SNV9 1468 aa19.99■□□□□ 0.79
ATRX-211ENST00000623321 ORAI2Q96SN7 254 aa19.98■□□□□ 0.79
ATRX-211ENST00000623321 ADAMTS8Q9UP79 889 aa19.98■□□□□ 0.79
ATRX-211ENST00000623321 XIRP1Q702N8 1843 aaKnown RBP19.97■□□□□ 0.79
ATRX-211ENST00000623321 AATKQ6ZMQ8 1374 aa19.96■□□□□ 0.79
ATRX-211ENST00000623321 MST1RQ04912 1400 aa19.96■□□□□ 0.79
ATRX-211ENST00000623321 PSME1Q06323 249 aa19.96■□□□□ 0.79
ATRX-211ENST00000623321 OVOS2A0A0J9YW53 1432 aa19.95■□□□□ 0.78
ATRX-211ENST00000623321 OVOS2Q6IE36 1432 aa19.95■□□□□ 0.78
ATRX-211ENST00000623321 POLKQ9UBT6 870 aa19.94■□□□□ 0.78
ATRX-211ENST00000623321 USP31Q70CQ4 1352 aa19.94■□□□□ 0.78
ATRX-211ENST00000623321 AEBP2Q6ZN18 517 aaPredicted RBP19.94■□□□□ 0.78
ATRX-211ENST00000623321 BLMP54132 1417 aaPredicted RBP19.93■□□□□ 0.78
ATRX-211ENST00000623321 FOXO3O43524 673 aa19.92■□□□□ 0.78
ATRX-211ENST00000623321 KIF1AQ12756 1690 aa19.92■□□□□ 0.78
ATRX-211ENST00000623321 PNPLA6Q8IY17 1366 aa19.92■□□□□ 0.78
ATRX-211ENST00000623321 PAK3O75914 559 aaPredicted RBP19.92■□□□□ 0.78
ATRX-211ENST00000623321 FBLN1P23142 703 aa19.92■□□□□ 0.78
ATRX-211ENST00000623321 MAP2P11137 1827 aaKnown RBP19.91■□□□□ 0.78
ATRX-211ENST00000623321 PIK3C2AO00443 1686 aa19.91■□□□□ 0.78
ATRX-211ENST00000623321 ABTB2Q8N961 1025 aa19.9■□□□□ 0.78
ATRX-211ENST00000623321 SHPRHQ149N8 1683 aa19.9■□□□□ 0.78
ATRX-211ENST00000623321 NLRP6P59044 892 aa19.9■□□□□ 0.78
ATRX-211ENST00000623321 COL3A1P02461 1466 aaPredicted RBP19.89■□□□□ 0.77
ATRX-211ENST00000623321 PPM1GO15355 546 aaPredicted RBP19.88■□□□□ 0.77
ATRX-211ENST00000623321 CCDC136Q96JN2 1154 aa19.88■□□□□ 0.77
ATRX-211ENST00000623321 PDE3BQ13370 1112 aa19.88■□□□□ 0.77
ATRX-211ENST00000623321 EMILIN1Q9Y6C2 1016 aa19.88■□□□□ 0.77
ATRX-211ENST00000623321 RRS1Q15050 365 aaKnown RBP19.87■□□□□ 0.77
ATRX-211ENST00000623321 KRT28Q7Z3Y7 464 aa19.87■□□□□ 0.77
ATRX-211ENST00000623321 DIAPH1O60610 1272 aaKnown RBP19.86■□□□□ 0.77
ATRX-211ENST00000623321 USP54Q70EL1 1684 aa19.86■□□□□ 0.77
ATRX-211ENST00000623321 CDK12Q9NYV4 1490 aaPredicted RBP19.86■□□□□ 0.77
ATRX-211ENST00000623321 NUTM2GQ5VZR2 741 aa19.85■□□□□ 0.77
ATRX-211ENST00000623321 ERICH6Q7L0X2 663 aa19.85■□□□□ 0.77
ATRX-211ENST00000623321 XPCQ01831 940 aaPredicted RBP19.84■□□□□ 0.77
ATRX-211ENST00000623321 SLAIN2Q9P270 581 aa19.84■□□□□ 0.77
ATRX-211ENST00000623321 RRP1P56182 461 aaKnown RBP19.84■□□□□ 0.77
ATRX-211ENST00000623321 NPHP3Q7Z494 1330 aa19.83■□□□□ 0.77
ATRX-211ENST00000623321 SENP3-EIF4A1A0A087X0R7 540 aa19.83■□□□□ 0.76
ATRX-211ENST00000623321 U2AF1L5P0DN76 240 aaPredicted RBP19.83■□□□□ 0.76
ATRX-211ENST00000623321 U2AF1Q01081 240 aaKnown RBP eCLIP19.83■□□□□ 0.76
ATRX-211ENST00000623321 MARF1Q9Y4F3 1742 aaKnown RBP19.82■□□□□ 0.76
ATRX-211ENST00000623321 CCDC146Q8IYE0 955 aa19.82■□□□□ 0.76
ATRX-211ENST00000623321 TRPM3Q9HCF6 1732 aaPredicted RBP19.82■□□□□ 0.76
ATRX-211ENST00000623321 U2SURPO15042 1029 aaKnown RBP19.82■□□□□ 0.76
ATRX-211ENST00000623321 SOX12O15370 315 aa19.82■□□□□ 0.76
ATRX-211ENST00000623321 BRINP3Q76B58 766 aa19.81■□□□□ 0.76
ATRX-211ENST00000623321 RUNDC1Q96C34 613 aa19.79■□□□□ 0.76
ATRX-211ENST00000623321 SALL2Q9Y467 1007 aaPredicted RBP19.79■□□□□ 0.76
ATRX-211ENST00000623321 LTBP4Q8N2S1 1624 aa19.79■□□□□ 0.76
ATRX-211ENST00000623321 MAP3K19Q56UN5 1328 aa19.79■□□□□ 0.76
ATRX-211ENST00000623321 IL13P35225 146 aa19.79■□□□□ 0.76
ATRX-211ENST00000623321 RCAN3Q9UKA8 241 aa19.79■□□□□ 0.76
ATRX-211ENST00000623321 SBNO1A3KN83 1393 aa19.79■□□□□ 0.76
ATRX-211ENST00000623321 KCNH5Q8NCM2 988 aa19.78■□□□□ 0.76
ATRX-211ENST00000623321 DDX17Q92841 729 aaKnown RBP19.78■□□□□ 0.76
ATRX-211ENST00000623321 APAF1O14727 1248 aa19.77■□□□□ 0.76
ATRX-211ENST00000623321 LMOD2Q6P5Q4 547 aa19.77■□□□□ 0.76
ATRX-211ENST00000623321 NGEFQ8N5V2 710 aa19.77■□□□□ 0.76
ATRX-211ENST00000623321 KIF24Q5T7B8 1368 aa19.77■□□□□ 0.76
ATRX-211ENST00000623321 PNNQ9H307 717 aaKnown RBP19.77■□□□□ 0.76
ATRX-211ENST00000623321 AMPHP49418 695 aa19.76■□□□□ 0.75
ATRX-211ENST00000623321 PEAK1Q9H792 1746 aa19.76■□□□□ 0.75
ATRX-211ENST00000623321 FLT4P35916 1363 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms