RNA–Protein interactions for RNA: ENST00000623266.1

PCDHB9-202, Transcript of protocadherin beta 9, humanhuman

TSL 4

Gene PCDHB9, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-202ENST00000623266 CCDC9Q9Y3X0 531 aaKnown RBP13.3□□□□□ -0.28
PCDHB9-202ENST00000623266 NRAPQ86VF7 1730 aa13.28□□□□□ -0.28
PCDHB9-202ENST00000623266 CRYBG1Q9Y4K1 1723 aa13.28□□□□□ -0.28
PCDHB9-202ENST00000623266 PLEKHG3A1L390 1219 aa13.28□□□□□ -0.28
PCDHB9-202ENST00000623266 KRT27Q7Z3Y8 459 aa13.28□□□□□ -0.28
PCDHB9-202ENST00000623266 ZRANB1Q9UGI0 708 aa13.28□□□□□ -0.28
PCDHB9-202ENST00000623266 CCDC61Q9Y6R9 512 aa13.28□□□□□ -0.28
PCDHB9-202ENST00000623266 ACEP12821 1306 aa13.28□□□□□ -0.28
PCDHB9-202ENST00000623266 FAM98CQ17RN3 349 aaKnown RBP13.27□□□□□ -0.29
PCDHB9-202ENST00000623266 NUTM2GQ5VZR2 741 aa13.27□□□□□ -0.29
PCDHB9-202ENST00000623266 ATP7BP35670 1465 aa13.27□□□□□ -0.29
PCDHB9-202ENST00000623266 BLMP54132 1417 aaPredicted RBP13.26□□□□□ -0.29
PCDHB9-202ENST00000623266 COL14A1Q05707 1796 aaKnown RBP13.26□□□□□ -0.29
PCDHB9-202ENST00000623266 EIF3AQ14152 1382 aaKnown RBP13.26□□□□□ -0.29
PCDHB9-202ENST00000623266 SPATA31A5Q5VU36 1347 aa13.26□□□□□ -0.29
PCDHB9-202ENST00000623266 SPATA31A7Q8IWB4 1347 aa13.26□□□□□ -0.29
PCDHB9-202ENST00000623266 KIAA1210Q9ULL0 1709 aa13.26□□□□□ -0.29
PCDHB9-202ENST00000623266 ZC3H6P61129 1189 aaKnown RBP13.25□□□□□ -0.29
PCDHB9-202ENST00000623266 CHRNA2Q15822 529 aa13.25□□□□□ -0.29
PCDHB9-202ENST00000623266 FAM182BQ5T319 152 aa13.25□□□□□ -0.29
PCDHB9-202ENST00000623266 L3MBTL2Q969R5 705 aa13.25□□□□□ -0.29
PCDHB9-202ENST00000623266 SIN3AQ96ST3 1273 aa13.25□□□□□ -0.29
PCDHB9-202ENST00000623266 POLR3AO14802 1390 aaPredicted RBP13.24□□□□□ -0.29
PCDHB9-202ENST00000623266 ITSN1Q15811 1721 aa13.24□□□□□ -0.29
PCDHB9-202ENST00000623266 KIAA0232Q92628 1395 aa13.23□□□□□ -0.29
PCDHB9-202ENST00000623266 CABP2Q9NPB3 220 aa13.23□□□□□ -0.29
PCDHB9-202ENST00000623266 PRDM11Q9NQV5 511 aa13.23□□□□□ -0.29
PCDHB9-202ENST00000623266 TOPAZ1Q8N9V7 1692 aa13.21□□□□□ -0.29
PCDHB9-202ENST00000623266 SPATA31A1Q5TZJ5 1347 aa13.21□□□□□ -0.29
PCDHB9-202ENST00000623266 ABTB2Q8N961 1025 aa13.21□□□□□ -0.29
PCDHB9-202ENST00000623266 SF3B2Q13435 895 aaKnown RBP13.2□□□□□ -0.3
PCDHB9-202ENST00000623266 PHRF1Q9P1Y6 1649 aaKnown RBP13.2□□□□□ -0.3
PCDHB9-202ENST00000623266 CENPJQ9HC77 1338 aaPredicted RBP13.19□□□□□ -0.3
PCDHB9-202ENST00000623266 A0A0G2JS52 829 aa13.19□□□□□ -0.3
PCDHB9-202ENST00000623266 SRPK2P78362 688 aaKnown RBP13.19□□□□□ -0.3
PCDHB9-202ENST00000623266 MYT1Q01538 1121 aa13.19□□□□□ -0.3
PCDHB9-202ENST00000623266 EN1Q05925 392 aaPredicted RBP13.19□□□□□ -0.3
PCDHB9-202ENST00000623266 STRN4Q9NRL3 753 aa13.19□□□□□ -0.3
PCDHB9-202ENST00000623266 CABP1Q9NZU7 370 aa13.19□□□□□ -0.3
PCDHB9-202ENST00000623266 CAMTA1Q9Y6Y1 1673 aa13.18□□□□□ -0.3
PCDHB9-202ENST00000623266 GCP02774 474 aa13.18□□□□□ -0.3
PCDHB9-202ENST00000623266 EVA1CP58658 441 aa13.17□□□□□ -0.3
PCDHB9-202ENST00000623266 NEUROD1Q13562 356 aa13.17□□□□□ -0.3
PCDHB9-202ENST00000623266 LARP1Q6PKG0 1096 aaKnown RBP13.17□□□□□ -0.3
PCDHB9-202ENST00000623266 THSD7AQ9UPZ6 1657 aa13.17□□□□□ -0.3
PCDHB9-202ENST00000623266 USP19O94966 1318 aa13.16□□□□□ -0.3
PCDHB9-202ENST00000623266 PPIP5K1Q6PFW1 1433 aa13.16□□□□□ -0.3
PCDHB9-202ENST00000623266 NLRP13Q86W25 1043 aa13.16□□□□□ -0.3
PCDHB9-202ENST00000623266 USP35Q9P2H5 1018 aa13.16□□□□□ -0.3
PCDHB9-202ENST00000623266 BAG6P46379 1132 aa13.15□□□□□ -0.3
PCDHB9-202ENST00000623266 BARGINQ6ZT62 677 aa13.15□□□□□ -0.3
PCDHB9-202ENST00000623266 PSDA5PKW4 1024 aaPredicted RBP13.14□□□□□ -0.31
PCDHB9-202ENST00000623266 EZH2Q15910 746 aaKnown RBP13.14□□□□□ -0.31
PCDHB9-202ENST00000623266 CAMKK2Q96RR4 588 aa13.14□□□□□ -0.31
PCDHB9-202ENST00000623266 CPDO75976 1380 aa13.14□□□□□ -0.31
PCDHB9-202ENST00000623266 LMO7Q8WWI1 1683 aa13.14□□□□□ -0.31
PCDHB9-202ENST00000623266 QRICH2Q9H0J4 1663 aa13.14□□□□□ -0.31
PCDHB9-202ENST00000623266 SSH2Q76I76 1423 aa13.13□□□□□ -0.31
PCDHB9-202ENST00000623266 TRIM37O94972 964 aa13.13□□□□□ -0.31
PCDHB9-202ENST00000623266 NLRP6P59044 892 aa13.13□□□□□ -0.31
PCDHB9-202ENST00000623266 FAM196AQ6ZSG2 479 aa13.13□□□□□ -0.31
PCDHB9-202ENST00000623266 TRPM1Q7Z4N2 1603 aa13.13□□□□□ -0.31
PCDHB9-202ENST00000623266 NRKQ7Z2Y5 1582 aa13.12□□□□□ -0.31
PCDHB9-202ENST00000623266 AXIN2Q9Y2T1 843 aa13.12□□□□□ -0.31
PCDHB9-202ENST00000623266 RGPD1P0DJD0 1748 aa13.12□□□□□ -0.31
PCDHB9-202ENST00000623266 TNS1Q9HBL0 1735 aaKnown RBP13.11□□□□□ -0.31
PCDHB9-202ENST00000623266 BRD4O60885 1362 aaPredicted RBP13.11□□□□□ -0.31
PCDHB9-202ENST00000623266 TCP11L2Q8N4U5 519 aa13.11□□□□□ -0.31
PCDHB9-202ENST00000623266 COL18A1P39060 1754 aa13.11□□□□□ -0.31
PCDHB9-202ENST00000623266 USP6P35125 1406 aa13.11□□□□□ -0.31
PCDHB9-202ENST00000623266 EVC2Q86UK5 1308 aa13.11□□□□□ -0.31
PCDHB9-202ENST00000623266 PDE3BQ13370 1112 aa13.1□□□□□ -0.31
PCDHB9-202ENST00000623266 ZNF692Q9BU19 519 aaPredicted RBP13.1□□□□□ -0.31
PCDHB9-202ENST00000623266 TTC21BQ7Z4L5 1316 aa13.1□□□□□ -0.31
PCDHB9-202ENST00000623266 DISP2A7MBM2 1401 aa13.09□□□□□ -0.31
PCDHB9-202ENST00000623266 APBA3O96018 575 aa13.09□□□□□ -0.31
PCDHB9-202ENST00000623266 R3HDM1Q15032 1099 aaKnown RBP13.09□□□□□ -0.31
PCDHB9-202ENST00000623266 THRAP3Q9Y2W1 955 aaKnown RBP13.09□□□□□ -0.31
PCDHB9-202ENST00000623266 RGPD5Q99666 1765 aa13.09□□□□□ -0.31
PCDHB9-202ENST00000623266 ARHGEF25Q86VW2 580 aa13.08□□□□□ -0.32
PCDHB9-202ENST00000623266 COL5A2P05997 1499 aaPredicted RBP13.08□□□□□ -0.32
PCDHB9-202ENST00000623266 AATKQ6ZMQ8 1374 aa13.07□□□□□ -0.32
PCDHB9-202ENST00000623266 ZBTB7CA1YPR0 619 aa13.07□□□□□ -0.32
PCDHB9-202ENST00000623266 PIK3C2AO00443 1686 aa13.07□□□□□ -0.32
PCDHB9-202ENST00000623266 SLIT3O75094 1523 aa13.07□□□□□ -0.32
PCDHB9-202ENST00000623266 ROCK2O75116 1388 aaKnown RBP13.07□□□□□ -0.32
PCDHB9-202ENST00000623266 CPSF1Q10570 1443 aaKnown RBP13.06□□□□□ -0.32
PCDHB9-202ENST00000623266 AKAP12Q02952 1782 aa13.06□□□□□ -0.32
PCDHB9-202ENST00000623266 PTF1AQ7RTS3 328 aa13.05□□□□□ -0.32
PCDHB9-202ENST00000623266 PARP4Q9UKK3 1724 aaKnown RBP13.05□□□□□ -0.32
PCDHB9-202ENST00000623266 CRB1P82279 1406 aa13.05□□□□□ -0.32
PCDHB9-202ENST00000623266 SBF2Q86WG5 1849 aa13.04□□□□□ -0.32
PCDHB9-202ENST00000623266 LRP5O75197 1615 aa13.03□□□□□ -0.32
PCDHB9-202ENST00000623266 TOM1L2Q6ZVM7 507 aa13.03□□□□□ -0.32
PCDHB9-202ENST00000623266 MARCH10Q8NA82 808 aaPredicted RBP13.03□□□□□ -0.32
PCDHB9-202ENST00000623266 SLC12A5Q9H2X9 1139 aa13.03□□□□□ -0.32
PCDHB9-202ENST00000623266 PEAK1Q9H792 1746 aa13.02□□□□□ -0.32
PCDHB9-202ENST00000623266 SOX12O15370 315 aa13.02□□□□□ -0.33
PCDHB9-202ENST00000623266 PROM2Q8N271 834 aa13.02□□□□□ -0.33
PCDHB9-202ENST00000623266 KCNH5Q8NCM2 988 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms