RNA–Protein interactions for RNA: ENST00000623073.3

ERCC6-209, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 11,026 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-209ENST00000623073 SWAP70Q9UH65 585 aa7.59□□□□□ -1.19
ERCC6-209ENST00000623073 SDF4Q9BRK5 362 aa7.59□□□□□ -1.19
ERCC6-209ENST00000623073 SMC2O95347 1197 aa7.59□□□□□ -1.19
ERCC6-209ENST00000623073 RASSF4Q9H2L5 321 aa7.59□□□□□ -1.19
ERCC6-209ENST00000623073 SOGA1O94964 1423 aa7.59□□□□□ -1.19
ERCC6-209ENST00000623073 RUNDC1Q96C34 613 aa7.59□□□□□ -1.19
ERCC6-209ENST00000623073 XBP1P17861 261 aa7.59□□□□□ -1.19
ERCC6-209ENST00000623073 SPATS2Q86XZ4 545 aaKnown RBP7.59□□□□□ -1.19
ERCC6-209ENST00000623073 RASSF8Q8NHQ8 419 aa7.59□□□□□ -1.19
ERCC6-209ENST00000623073 SARNPP82979 210 aaKnown RBP7.59□□□□□ -1.2
ERCC6-209ENST00000623073 CPLX1O14810 134 aa7.58□□□□□ -1.2
ERCC6-209ENST00000623073 GIGYF2Q6Y7W6 1299 aaKnown RBP7.58□□□□□ -1.2
ERCC6-209ENST00000623073 CCDC183Q5T5S1 534 aa7.58□□□□□ -1.2
ERCC6-209ENST00000623073 SPECC1LQ69YQ0 1117 aa7.58□□□□□ -1.2
ERCC6-209ENST00000623073 ZKSCAN5Q9Y2L8 839 aa7.58□□□□□ -1.2
ERCC6-209ENST00000623073 USH1CQ9Y6N9 552 aa7.58□□□□□ -1.2
ERCC6-209ENST00000623073 ABCC8Q09428 1581 aa7.58□□□□□ -1.2
ERCC6-209ENST00000623073 GTF2A1P52655 376 aaPredicted RBP7.58□□□□□ -1.2
ERCC6-209ENST00000623073 PPFIA3O75145 1194 aa7.58□□□□□ -1.2
ERCC6-209ENST00000623073 FYCO1Q9BQS8 1478 aa7.58□□□□□ -1.2
ERCC6-209ENST00000623073 HOMEZQ8IX15 550 aa7.58□□□□□ -1.2
ERCC6-209ENST00000623073 MKRN1Q9UHC7 482 aaKnown RBP7.58□□□□□ -1.2
ERCC6-209ENST00000623073 KRT32Q14532 448 aa7.57□□□□□ -1.2
ERCC6-209ENST00000623073 ARFGAP2Q8N6H7 521 aa7.57□□□□□ -1.2
ERCC6-209ENST00000623073 CCDC150Q8NCX0 1101 aa7.57□□□□□ -1.2
ERCC6-209ENST00000623073 USP25Q9UHP3 1055 aa7.57□□□□□ -1.2
ERCC6-209ENST00000623073 HSP90AB3PQ58FF7 597 aa7.57□□□□□ -1.2
ERCC6-209ENST00000623073 CCDC146Q8IYE0 955 aa7.57□□□□□ -1.2
ERCC6-209ENST00000623073 WDR63Q8IWG1 891 aa7.57□□□□□ -1.2
ERCC6-209ENST00000623073 SH2B1Q9NRF2 756 aaPredicted RBP7.57□□□□□ -1.2
ERCC6-209ENST00000623073 CPSF2Q9P2I0 782 aaKnown RBP7.57□□□□□ -1.2
ERCC6-209ENST00000623073 GNAI3P08754 354 aa7.57□□□□□ -1.2
ERCC6-209ENST00000623073 ANKRD45Q5TZF3 282 aa7.57□□□□□ -1.2
ERCC6-209ENST00000623073 POTEDQ86YR6 584 aa7.57□□□□□ -1.2
ERCC6-209ENST00000623073 DDX19AQ9NUU7 478 aaKnown RBP7.57□□□□□ -1.2
ERCC6-209ENST00000623073 CCDC148Q8NFR7 591 aa7.57□□□□□ -1.2
ERCC6-209ENST00000623073 CCDC38Q502W7 563 aa7.56□□□□□ -1.2
ERCC6-209ENST00000623073 ZNF622Q969S3 477 aaKnown RBP eCLIP7.56□□□□□ -1.2
ERCC6-209ENST00000623073 CUX2O14529 1486 aa7.56□□□□□ -1.2
ERCC6-209ENST00000623073 MAP3K11Q16584 847 aa7.56□□□□□ -1.2
ERCC6-209ENST00000623073 BRMS1Q9HCU9 246 aa7.56□□□□□ -1.2
ERCC6-209ENST00000623073 ABCC11Q96J66 1382 aa7.56□□□□□ -1.2
ERCC6-209ENST00000623073 SMC1AQ14683 1233 aaKnown RBP7.56□□□□□ -1.2
ERCC6-209ENST00000623073 EFCAB5A4FU69 1503 aa7.56□□□□□ -1.2
ERCC6-209ENST00000623073 STIM1Q13586 685 aa7.56□□□□□ -1.2
ERCC6-209ENST00000623073 DNAJC21Q5F1R6 531 aaKnown RBP7.56□□□□□ -1.2
ERCC6-209ENST00000623073 ANKRD18BA2A2Z9 1011 aa7.56□□□□□ -1.2
ERCC6-209ENST00000623073 FMNL3Q8IVF7 1028 aa7.56□□□□□ -1.2
ERCC6-209ENST00000623073 CTCFLQ8NI51 663 aaPredicted RBP7.56□□□□□ -1.2
ERCC6-209ENST00000623073 PPFIBP1Q86W92 1011 aa7.56□□□□□ -1.2
ERCC6-209ENST00000623073 ERC1Q8IUD2 1116 aa7.56□□□□□ -1.2
ERCC6-209ENST00000623073 FGD6Q6ZV73 1430 aa7.56□□□□□ -1.2
ERCC6-209ENST00000623073 A0A1B0GUL7 405 aa7.56□□□□□ -1.2
ERCC6-209ENST00000623073 MIPOL1Q8TD10 442 aa7.56□□□□□ -1.2
ERCC6-209ENST00000623073 PYM1Q9BRP8 204 aaKnown RBP7.56□□□□□ -1.2
ERCC6-209ENST00000623073 RNF214Q8ND24 703 aa7.56□□□□□ -1.2
ERCC6-209ENST00000623073 SH2D4BQ5SQS7 431 aa7.55□□□□□ -1.2
ERCC6-209ENST00000623073 FAM114A1Q8IWE2 563 aa7.55□□□□□ -1.2
ERCC6-209ENST00000623073 TRDNQ13061 729 aa7.55□□□□□ -1.2
ERCC6-209ENST00000623073 NAA15Q9BXJ9 866 aaKnown RBP7.55□□□□□ -1.2
ERCC6-209ENST00000623073 TDO2P48775 406 aa7.55□□□□□ -1.2
ERCC6-209ENST00000623073 RGL3Q3MIN7 710 aa7.55□□□□□ -1.2
ERCC6-209ENST00000623073 ZNF397Q8NF99 534 aaPredicted RBP7.55□□□□□ -1.2
ERCC6-209ENST00000623073 PPM1EQ8WY54 764 aa7.55□□□□□ -1.2
ERCC6-209ENST00000623073 TMCO5BA8MYB1 307 aa7.55□□□□□ -1.2
ERCC6-209ENST00000623073 WDR66Q8TBY9 1149 aa7.55□□□□□ -1.2
ERCC6-209ENST00000623073 TNMDQ9H2S6 317 aa7.55□□□□□ -1.2
ERCC6-209ENST00000623073 NUP62CLQ9H1M0 184 aa7.55□□□□□ -1.2
ERCC6-209ENST00000623073 ARFGAP3Q9NP61 516 aa7.55□□□□□ -1.2
ERCC6-209ENST00000623073 PLEKHG5O94827 1062 aa7.55□□□□□ -1.2
ERCC6-209ENST00000623073 MNAT1P51948 309 aa7.55□□□□□ -1.2
ERCC6-209ENST00000623073 FYB1O15117 783 aa7.54□□□□□ -1.2
ERCC6-209ENST00000623073 CDKL5O76039 1030 aa7.54□□□□□ -1.2
ERCC6-209ENST00000623073 PAK3O75914 559 aaPredicted RBP7.54□□□□□ -1.2
ERCC6-209ENST00000623073 SMARCC1Q92922 1105 aaPredicted RBP7.54□□□□□ -1.2
ERCC6-209ENST00000623073 SNX21Q969T3 373 aa7.54□□□□□ -1.2
ERCC6-209ENST00000623073 ANO10Q9NW15 660 aa7.54□□□□□ -1.2
ERCC6-209ENST00000623073 HSPA4P34932 840 aa7.54□□□□□ -1.2
ERCC6-209ENST00000623073 CT47A1Q5JQC4 288 aaPredicted RBP7.54□□□□□ -1.2
ERCC6-209ENST00000623073 CROCCP2Q86T23 111 aa7.54□□□□□ -1.2
ERCC6-209ENST00000623073 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.54□□□□□ -1.2
ERCC6-209ENST00000623073 CHMP7Q8WUX9 453 aaPredicted RBP7.54□□□□□ -1.2
ERCC6-209ENST00000623073 KIF5CO60282 957 aa7.54□□□□□ -1.2
ERCC6-209ENST00000623073 ARHGAP29Q52LW3 1261 aa7.54□□□□□ -1.2
ERCC6-209ENST00000623073 MYCBPQ99417 103 aaPredicted RBP7.54□□□□□ -1.2
ERCC6-209ENST00000623073 CCDC88BA6NC98 1476 aa7.54□□□□□ -1.2
ERCC6-209ENST00000623073 FBLN2P98095 1184 aa7.54□□□□□ -1.2
ERCC6-209ENST00000623073 SF3B2Q13435 895 aaKnown RBP7.54□□□□□ -1.2
ERCC6-209ENST00000623073 ANO2Q9NQ90 1003 aa7.54□□□□□ -1.2
ERCC6-209ENST00000623073 BRD2P25440 801 aaKnown RBP7.53□□□□□ -1.2
ERCC6-209ENST00000623073 B4GALNT4Q76KP1 1039 aa7.53□□□□□ -1.2
ERCC6-209ENST00000623073 RSRC1Q96IZ7 334 aaKnown RBP7.53□□□□□ -1.2
ERCC6-209ENST00000623073 STMN4Q9H169 189 aaPredicted RBP7.53□□□□□ -1.2
ERCC6-209ENST00000623073 GPRASP1Q5JY77 1395 aa7.53□□□□□ -1.2
ERCC6-209ENST00000623073 MYO1BO43795 1136 aa7.53□□□□□ -1.2
ERCC6-209ENST00000623073 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.53□□□□□ -1.2
ERCC6-209ENST00000623073 RBM33Q96EV2 1170 aaKnown RBP7.53□□□□□ -1.2
ERCC6-209ENST00000623073 NOL7Q9UMY1 257 aaKnown RBP7.53□□□□□ -1.2
ERCC6-209ENST00000623073 COG6Q9Y2V7 657 aa7.53□□□□□ -1.2
ERCC6-209ENST00000623073 ELP1O95163 1332 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms