RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 ATAD2Q6PL18 1390 aa18.65■□□□□ 0.58
ATRX-208ENST00000622960 GJD4Q96KN9 370 aaPredicted RBP18.64■□□□□ 0.57
ATRX-208ENST00000622960 CCDC9Q9Y3X0 531 aaKnown RBP18.64■□□□□ 0.57
ATRX-208ENST00000622960 UPF1Q92900 1129 aaKnown RBP eCLIP18.63■□□□□ 0.57
ATRX-208ENST00000622960 PPIP5K1Q6PFW1 1433 aa18.63■□□□□ 0.57
ATRX-208ENST00000622960 ACEP12821 1306 aa18.62■□□□□ 0.57
ATRX-208ENST00000622960 EVC2Q86UK5 1308 aa18.62■□□□□ 0.57
ATRX-208ENST00000622960 POLR3AO14802 1390 aaPredicted RBP18.62■□□□□ 0.57
ATRX-208ENST00000622960 COL14A1Q05707 1796 aaKnown RBP18.62■□□□□ 0.57
ATRX-208ENST00000622960 RALGAPBQ86X10 1494 aa18.6■□□□□ 0.57
ATRX-208ENST00000622960 PLEKHG3A1L390 1219 aa18.59■□□□□ 0.57
ATRX-208ENST00000622960 CABP2Q9NPB3 220 aa18.59■□□□□ 0.57
ATRX-208ENST00000622960 VPS72Q15906 364 aa18.58■□□□□ 0.56
ATRX-208ENST00000622960 NBPF8Q3BBV2 869 aa18.58■□□□□ 0.56
ATRX-208ENST00000622960 PRDM11Q9NQV5 511 aa18.58■□□□□ 0.56
ATRX-208ENST00000622960 CRYBG1Q9Y4K1 1723 aa18.57■□□□□ 0.56
ATRX-208ENST00000622960 BRD4O60885 1362 aaPredicted RBP18.57■□□□□ 0.56
ATRX-208ENST00000622960 PHRF1Q9P1Y6 1649 aaKnown RBP18.57■□□□□ 0.56
ATRX-208ENST00000622960 A0A0G2JS52 829 aa18.57■□□□□ 0.56
ATRX-208ENST00000622960 MYT1Q01538 1121 aa18.57■□□□□ 0.56
ATRX-208ENST00000622960 CARD11Q9BXL7 1154 aa18.57■□□□□ 0.56
ATRX-208ENST00000622960 GLI3P10071 1580 aa18.56■□□□□ 0.56
ATRX-208ENST00000622960 ABTB2Q8N961 1025 aa18.56■□□□□ 0.56
ATRX-208ENST00000622960 BTG4Q9NY30 223 aa18.56■□□□□ 0.56
ATRX-208ENST00000622960 FAM83GA6ND36 823 aa18.55■□□□□ 0.56
ATRX-208ENST00000622960 NRAPQ86VF7 1730 aa18.54■□□□□ 0.56
ATRX-208ENST00000622960 NUTM2GQ5VZR2 741 aa18.53■□□□□ 0.56
ATRX-208ENST00000622960 NLRP13Q86W25 1043 aa18.53■□□□□ 0.56
ATRX-208ENST00000622960 CABP1Q9NZU7 370 aa18.52■□□□□ 0.56
ATRX-208ENST00000622960 KIAA0232Q92628 1395 aa18.52■□□□□ 0.55
ATRX-208ENST00000622960 USP6P35125 1406 aa18.51■□□□□ 0.55
ATRX-208ENST00000622960 SBNO2Q9Y2G9 1366 aa18.51■□□□□ 0.55
ATRX-208ENST00000622960 NRKQ7Z2Y5 1582 aa18.51■□□□□ 0.55
ATRX-208ENST00000622960 ZC3H6P61129 1189 aaKnown RBP18.49■□□□□ 0.55
ATRX-208ENST00000622960 CCDC125Q86Z20 511 aa18.49■□□□□ 0.55
ATRX-208ENST00000622960 SEPT12Q8IYM1 358 aa18.49■□□□□ 0.55
ATRX-208ENST00000622960 ZNF692Q9BU19 519 aaPredicted RBP18.48■□□□□ 0.55
ATRX-208ENST00000622960 SF3B2Q13435 895 aaKnown RBP18.47■□□□□ 0.55
ATRX-208ENST00000622960 STRN4Q9NRL3 753 aa18.47■□□□□ 0.55
ATRX-208ENST00000622960 USP19O94966 1318 aa18.47■□□□□ 0.55
ATRX-208ENST00000622960 EVA1CP58658 441 aa18.46■□□□□ 0.55
ATRX-208ENST00000622960 NLRP6P59044 892 aa18.46■□□□□ 0.55
ATRX-208ENST00000622960 CHRNA2Q15822 529 aa18.46■□□□□ 0.55
ATRX-208ENST00000622960 BRWD3Q6RI45 1802 aa18.45■□□□□ 0.54
ATRX-208ENST00000622960 SLC24A1O60721 1099 aa18.45■□□□□ 0.54
ATRX-208ENST00000622960 FAM98CQ17RN3 349 aaKnown RBP18.45■□□□□ 0.54
ATRX-208ENST00000622960 KRT27Q7Z3Y8 459 aa18.45■□□□□ 0.54
ATRX-208ENST00000622960 SPATA31A5Q5VU36 1347 aa18.45■□□□□ 0.54
ATRX-208ENST00000622960 SPATA31A7Q8IWB4 1347 aa18.45■□□□□ 0.54
ATRX-208ENST00000622960 AKAP12Q02952 1782 aa18.45■□□□□ 0.54
ATRX-208ENST00000622960 CPDO75976 1380 aa18.44■□□□□ 0.54
ATRX-208ENST00000622960 ZBTB7CA1YPR0 619 aa18.44■□□□□ 0.54
ATRX-208ENST00000622960 KTN1Q86UP2 1357 aaKnown RBP18.43■□□□□ 0.54
ATRX-208ENST00000622960 BLMP54132 1417 aaPredicted RBP18.43■□□□□ 0.54
ATRX-208ENST00000622960 ONECUT3O60422 494 aaPredicted RBP18.43■□□□□ 0.54
ATRX-208ENST00000622960 GCP02774 474 aa18.43■□□□□ 0.54
ATRX-208ENST00000622960 TTC21AQ8NDW8 1320 aa18.43■□□□□ 0.54
ATRX-208ENST00000622960 PIK3C2AO00443 1686 aa18.42■□□□□ 0.54
ATRX-208ENST00000622960 SLIT3O75094 1523 aa18.41■□□□□ 0.54
ATRX-208ENST00000622960 HDGFL2Q7Z4V5 671 aaPredicted RBP18.41■□□□□ 0.54
ATRX-208ENST00000622960 TMC1Q8TDI8 760 aa18.41■□□□□ 0.54
ATRX-208ENST00000622960 SSH2Q76I76 1423 aa18.4■□□□□ 0.54
ATRX-208ENST00000622960 KCNH5Q8NCM2 988 aa18.4■□□□□ 0.54
ATRX-208ENST00000622960 SPATA31A1Q5TZJ5 1347 aa18.4■□□□□ 0.54
ATRX-208ENST00000622960 LMO7Q8WWI1 1683 aa18.39■□□□□ 0.53
ATRX-208ENST00000622960 PCGF6Q9BYE7 350 aa18.39■□□□□ 0.53
ATRX-208ENST00000622960 USP35Q9P2H5 1018 aa18.39■□□□□ 0.53
ATRX-208ENST00000622960 MON2Q7Z3U7 1717 aa18.39■□□□□ 0.53
ATRX-208ENST00000622960 TTC21BQ7Z4L5 1316 aa18.39■□□□□ 0.53
ATRX-208ENST00000622960 CLSPNQ9HAW4 1339 aa18.39■□□□□ 0.53
ATRX-208ENST00000622960 CPSF1Q10570 1443 aaKnown RBP18.39■□□□□ 0.53
ATRX-208ENST00000622960 THSD7AQ9UPZ6 1657 aa18.38■□□□□ 0.53
ATRX-208ENST00000622960 TERF2IPQ9NYB0 399 aa18.38■□□□□ 0.53
ATRX-208ENST00000622960 NINLQ9Y2I6 1382 aa18.37■□□□□ 0.53
ATRX-208ENST00000622960 CAMTA1Q9Y6Y1 1673 aa18.37■□□□□ 0.53
ATRX-208ENST00000622960 PUS7Q96PZ0 661 aaKnown RBP18.36■□□□□ 0.53
ATRX-208ENST00000622960 ZRANB1Q9UGI0 708 aa18.36■□□□□ 0.53
ATRX-208ENST00000622960 TIMELESSQ9UNS1 1208 aa18.36■□□□□ 0.53
ATRX-208ENST00000622960 COL5A2P05997 1499 aaPredicted RBP18.35■□□□□ 0.53
ATRX-208ENST00000622960 AATKQ6ZMQ8 1374 aa18.35■□□□□ 0.53
ATRX-208ENST00000622960 ST20-MTHFSA0A0A6YYL1 179 aa18.34■□□□□ 0.53
ATRX-208ENST00000622960 SOX12O15370 315 aa18.34■□□□□ 0.53
ATRX-208ENST00000622960 LARP1Q6PKG0 1096 aaKnown RBP18.34■□□□□ 0.53
ATRX-208ENST00000622960 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.34■□□□□ 0.53
ATRX-208ENST00000622960 TCP11L2Q8N4U5 519 aa18.34■□□□□ 0.53
ATRX-208ENST00000622960 THRAP3Q9Y2W1 955 aaKnown RBP18.34■□□□□ 0.53
ATRX-208ENST00000622960 RGPD1P0DJD0 1748 aa18.34■□□□□ 0.53
ATRX-208ENST00000622960 CRB1P82279 1406 aa18.33■□□□□ 0.53
ATRX-208ENST00000622960 EDC4Q6P2E9 1401 aaKnown RBP18.33■□□□□ 0.53
ATRX-208ENST00000622960 USP47Q96K76 1375 aa18.33■□□□□ 0.53
ATRX-208ENST00000622960 BAG6P46379 1132 aa18.33■□□□□ 0.52
ATRX-208ENST00000622960 PDE3BQ13370 1112 aa18.33■□□□□ 0.52
ATRX-208ENST00000622960 BARGINQ6ZT62 677 aa18.33■□□□□ 0.52
ATRX-208ENST00000622960 TMF1P82094 1093 aa18.32■□□□□ 0.52
ATRX-208ENST00000622960 TOM1L2Q6ZVM7 507 aa18.31■□□□□ 0.52
ATRX-208ENST00000622960 ABCC6O95255 1503 aa18.3■□□□□ 0.52
ATRX-208ENST00000622960 CSB-PGBD3P0DP91 1061 aa18.3■□□□□ 0.52
ATRX-208ENST00000622960 CDCA8Q53HL2 280 aa18.3■□□□□ 0.52
ATRX-208ENST00000622960 A0A1W2PP64 1363 aa18.3■□□□□ 0.52
ATRX-208ENST00000622960 EP400Q96L91 3159 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms