RNA–Protein interactions for RNA: ENST00000622854.1

AP001065.3-201, humanhuman

BASIC

Gene AP001065.3, Length 646 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001065.3-201ENST00000622854 PPP2R1AP30153 589 aa14.64□□□□□ -0.07
AP001065.3-201ENST00000622854 NRKQ7Z2Y5 1582 aa14.64□□□□□ -0.07
AP001065.3-201ENST00000622854 CGNL1Q0VF96 1302 aa14.64□□□□□ -0.07
AP001065.3-201ENST00000622854 NKTRP30414 1462 aaKnown RBP14.63□□□□□ -0.07
AP001065.3-201ENST00000622854 HDGFL2Q7Z4V5 671 aaPredicted RBP14.63□□□□□ -0.07
AP001065.3-201ENST00000622854 CPSF1Q10570 1443 aaKnown RBP14.63□□□□□ -0.07
AP001065.3-201ENST00000622854 NSD2O96028 1365 aa14.62□□□□□ -0.07
AP001065.3-201ENST00000622854 MKRN4PQ13434 485 aaPredicted RBP14.62□□□□□ -0.07
AP001065.3-201ENST00000622854 PNISRQ8TF01 805 aaKnown RBP14.62□□□□□ -0.07
AP001065.3-201ENST00000622854 NUTM2FA1L443 756 aa14.61□□□□□ -0.07
AP001065.3-201ENST00000622854 HNRNPUQ00839 825 aaKnown RBP eCLIP14.6□□□□□ -0.07
AP001065.3-201ENST00000622854 MORC1Q86VD1 984 aa14.6□□□□□ -0.07
AP001065.3-201ENST00000622854 CCDC61Q9Y6R9 512 aa14.6□□□□□ -0.07
AP001065.3-201ENST00000622854 EDC4Q6P2E9 1401 aaKnown RBP14.59□□□□□ -0.07
AP001065.3-201ENST00000622854 ADGRL3Q9HAR2 1447 aa14.59□□□□□ -0.07
AP001065.3-201ENST00000622854 RBM33Q96EV2 1170 aaKnown RBP14.59□□□□□ -0.07
AP001065.3-201ENST00000622854 SHPRHQ149N8 1683 aa14.58□□□□□ -0.07
AP001065.3-201ENST00000622854 ANKARQ7Z5J8 1434 aa14.58□□□□□ -0.07
AP001065.3-201ENST00000622854 TNNT2P45379 298 aaPredicted RBP14.57□□□□□ -0.08
AP001065.3-201ENST00000622854 FYB1O15117 783 aa14.56□□□□□ -0.08
AP001065.3-201ENST00000622854 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.56□□□□□ -0.08
AP001065.3-201ENST00000622854 GGNBP2Q9H3C7 697 aa14.56□□□□□ -0.08
AP001065.3-201ENST00000622854 PLEKHG3A1L390 1219 aa14.55□□□□□ -0.08
AP001065.3-201ENST00000622854 ACEP12821 1306 aa14.55□□□□□ -0.08
AP001065.3-201ENST00000622854 XIRP1Q702N8 1843 aaKnown RBP14.55□□□□□ -0.08
AP001065.3-201ENST00000622854 USP6P35125 1406 aa14.54□□□□□ -0.08
AP001065.3-201ENST00000622854 BLMP54132 1417 aaPredicted RBP14.54□□□□□ -0.08
AP001065.3-201ENST00000622854 MAP2P11137 1827 aaKnown RBP14.53□□□□□ -0.08
AP001065.3-201ENST00000622854 POLR3AO14802 1390 aaPredicted RBP14.52□□□□□ -0.08
AP001065.3-201ENST00000622854 PROSER2Q86WR7 435 aaPredicted RBP14.52□□□□□ -0.09
AP001065.3-201ENST00000622854 NME9Q86XW9 330 aa14.52□□□□□ -0.09
AP001065.3-201ENST00000622854 PIK3C2AO00443 1686 aa14.52□□□□□ -0.09
AP001065.3-201ENST00000622854 SENP3-EIF4A1A0A087X0R7 540 aa14.51□□□□□ -0.09
AP001065.3-201ENST00000622854 C14orf37Q86TY3 774 aa14.51□□□□□ -0.09
AP001065.3-201ENST00000622854 PMFBP1Q8TBY8 1022 aa14.51□□□□□ -0.09
AP001065.3-201ENST00000622854 ZNF692Q9BU19 519 aaPredicted RBP14.51□□□□□ -0.09
AP001065.3-201ENST00000622854 ZRANB1Q9UGI0 708 aa14.51□□□□□ -0.09
AP001065.3-201ENST00000622854 SSH2Q76I76 1423 aa14.5□□□□□ -0.09
AP001065.3-201ENST00000622854 MARF1Q9Y4F3 1742 aaKnown RBP14.5□□□□□ -0.09
AP001065.3-201ENST00000622854 ZBED9Q6R2W3 1325 aa14.5□□□□□ -0.09
AP001065.3-201ENST00000622854 TTC21BQ7Z4L5 1316 aa14.5□□□□□ -0.09
AP001065.3-201ENST00000622854 COL3A1P02461 1466 aaPredicted RBP14.5□□□□□ -0.09
AP001065.3-201ENST00000622854 INSRP06213 1382 aa14.49□□□□□ -0.09
AP001065.3-201ENST00000622854 MTHFSP49914 203 aa14.49□□□□□ -0.09
AP001065.3-201ENST00000622854 TMEM94Q12767 1356 aa14.48□□□□□ -0.09
AP001065.3-201ENST00000622854 WDR43Q15061 677 aaKnown RBP eCLIP14.48□□□□□ -0.09
AP001065.3-201ENST00000622854 NGDNQ8NEJ9 315 aaKnown RBP14.48□□□□□ -0.09
AP001065.3-201ENST00000622854 ADAMTS8Q9UP79 889 aa14.48□□□□□ -0.09
AP001065.3-201ENST00000622854 USP54Q70EL1 1684 aa14.48□□□□□ -0.09
AP001065.3-201ENST00000622854 OVOS2A0A0J9YW53 1432 aa14.48□□□□□ -0.09
AP001065.3-201ENST00000622854 OVOS2Q6IE36 1432 aa14.48□□□□□ -0.09
AP001065.3-201ENST00000622854 KIF1AQ12756 1690 aa14.47□□□□□ -0.09
AP001065.3-201ENST00000622854 SPDYE4A6NLX3 237 aa14.46□□□□□ -0.09
AP001065.3-201ENST00000622854 PHF8Q9UPP1 1060 aa14.45□□□□□ -0.1
AP001065.3-201ENST00000622854 DCCP43146 1447 aa14.44□□□□□ -0.1
AP001065.3-201ENST00000622854 SMG6Q86US8 1419 aaKnown RBP14.44□□□□□ -0.1
AP001065.3-201ENST00000622854 NCOA3Q9Y6Q9 1424 aa14.44□□□□□ -0.1
AP001065.3-201ENST00000622854 FBLN1P23142 703 aa14.44□□□□□ -0.1
AP001065.3-201ENST00000622854 COG3Q96JB2 828 aa14.44□□□□□ -0.1
AP001065.3-201ENST00000622854 CFAP53Q96M91 514 aa14.44□□□□□ -0.1
AP001065.3-201ENST00000622854 LRRC7Q96NW7 1537 aa14.44□□□□□ -0.1
AP001065.3-201ENST00000622854 C1orf167Q5SNV9 1468 aa14.44□□□□□ -0.1
AP001065.3-201ENST00000622854 TTC21AQ8NDW8 1320 aa14.43□□□□□ -0.1
AP001065.3-201ENST00000622854 ZNF335Q9H4Z2 1342 aaPredicted RBP14.43□□□□□ -0.1
AP001065.3-201ENST00000622854 MST1RQ04912 1400 aa14.43□□□□□ -0.1
AP001065.3-201ENST00000622854 C19orf44Q9H6X5 657 aa14.43□□□□□ -0.1
AP001065.3-201ENST00000622854 PEAK1Q9H792 1746 aa14.43□□□□□ -0.1
AP001065.3-201ENST00000622854 TRPM3Q9HCF6 1732 aaPredicted RBP14.43□□□□□ -0.1
AP001065.3-201ENST00000622854 CDK12Q9NYV4 1490 aaPredicted RBP14.43□□□□□ -0.1
AP001065.3-201ENST00000622854 ESCO1Q5FWF5 840 aa14.42□□□□□ -0.1
AP001065.3-201ENST00000622854 AATKQ6ZMQ8 1374 aa14.42□□□□□ -0.1
AP001065.3-201ENST00000622854 CCDC146Q8IYE0 955 aa14.41□□□□□ -0.1
AP001065.3-201ENST00000622854 POLKQ9UBT6 870 aa14.41□□□□□ -0.1
AP001065.3-201ENST00000622854 PNPLA6Q8IY17 1366 aa14.41□□□□□ -0.1
AP001065.3-201ENST00000622854 USP31Q70CQ4 1352 aa14.4□□□□□ -0.1
AP001065.3-201ENST00000622854 ORAI2Q96SN7 254 aa14.4□□□□□ -0.1
AP001065.3-201ENST00000622854 SALL2Q9Y467 1007 aaPredicted RBP14.4□□□□□ -0.1
AP001065.3-201ENST00000622854 EMILIN1Q9Y6C2 1016 aa14.4□□□□□ -0.1
AP001065.3-201ENST00000622854 MSH6P52701 1360 aa14.39□□□□□ -0.11
AP001065.3-201ENST00000622854 ATF3P18847 181 aa14.39□□□□□ -0.11
AP001065.3-201ENST00000622854 RRS1Q15050 365 aaKnown RBP14.39□□□□□ -0.11
AP001065.3-201ENST00000622854 IQSEC2Q5JU85 1478 aa14.38□□□□□ -0.11
AP001065.3-201ENST00000622854 PPM1GO15355 546 aaPredicted RBP14.38□□□□□ -0.11
AP001065.3-201ENST00000622854 GTF3C3Q9Y5Q9 886 aa14.38□□□□□ -0.11
AP001065.3-201ENST00000622854 LTN1O94822 1766 aa14.37□□□□□ -0.11
AP001065.3-201ENST00000622854 ALS2Q96Q42 1657 aa14.36□□□□□ -0.11
AP001065.3-201ENST00000622854 PAK3O75914 559 aaPredicted RBP14.36□□□□□ -0.11
AP001065.3-201ENST00000622854 NUTM2GQ5VZR2 741 aa14.36□□□□□ -0.11
AP001065.3-201ENST00000622854 SOX12O15370 315 aa14.35□□□□□ -0.11
AP001065.3-201ENST00000622854 DIAPH1O60610 1272 aaKnown RBP14.35□□□□□ -0.11
AP001065.3-201ENST00000622854 U2AF1L5P0DN76 240 aaPredicted RBP14.35□□□□□ -0.11
AP001065.3-201ENST00000622854 U2AF1Q01081 240 aaKnown RBP eCLIP14.35□□□□□ -0.11
AP001065.3-201ENST00000622854 XPCQ01831 940 aaPredicted RBP14.35□□□□□ -0.11
AP001065.3-201ENST00000622854 PSME1Q06323 249 aa14.35□□□□□ -0.11
AP001065.3-201ENST00000622854 APAF1O14727 1248 aa14.34□□□□□ -0.11
AP001065.3-201ENST00000622854 U2SURPO15042 1029 aaKnown RBP14.34□□□□□ -0.11
AP001065.3-201ENST00000622854 FOXO3O43524 673 aa14.34□□□□□ -0.11
AP001065.3-201ENST00000622854 NLRP6P59044 892 aa14.34□□□□□ -0.11
AP001065.3-201ENST00000622854 CADPS2Q86UW7 1296 aa14.34□□□□□ -0.11
AP001065.3-201ENST00000622854 NUDCQ9Y266 331 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms