RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 FNBP4Q8N3X1 1017 aaPredicted RBP17.41■□□□□ 0.38
CBWD3-218ENST00000622755 POLR3AO14802 1390 aaPredicted RBP17.41■□□□□ 0.38
CBWD3-218ENST00000622755 ALS2Q96Q42 1657 aa17.4■□□□□ 0.38
CBWD3-218ENST00000622755 BRD4O60885 1362 aaPredicted RBP17.4■□□□□ 0.38
CBWD3-218ENST00000622755 ATAD2Q6PL18 1390 aa17.4■□□□□ 0.38
CBWD3-218ENST00000622755 CDK12Q9NYV4 1490 aaPredicted RBP17.39■□□□□ 0.38
CBWD3-218ENST00000622755 SBNO2Q9Y2G9 1366 aa17.39■□□□□ 0.37
CBWD3-218ENST00000622755 CABLES1Q8TDN4 633 aa17.38■□□□□ 0.37
CBWD3-218ENST00000622755 ABCA3Q99758 1704 aa17.38■□□□□ 0.37
CBWD3-218ENST00000622755 ABTB2Q8N961 1025 aa17.37■□□□□ 0.37
CBWD3-218ENST00000622755 CABP1Q9NZU7 370 aa17.37■□□□□ 0.37
CBWD3-218ENST00000622755 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.36■□□□□ 0.37
CBWD3-218ENST00000622755 UNC5CLQ8IV45 518 aa17.36■□□□□ 0.37
CBWD3-218ENST00000622755 ZNF692Q9BU19 519 aaPredicted RBP17.36■□□□□ 0.37
CBWD3-218ENST00000622755 NLRP13Q86W25 1043 aa17.35■□□□□ 0.37
CBWD3-218ENST00000622755 CCDC9Q9Y3X0 531 aaKnown RBP17.35■□□□□ 0.37
CBWD3-218ENST00000622755 NWD2Q9ULI1 1742 aa17.35■□□□□ 0.37
CBWD3-218ENST00000622755 ATRNO75882 1429 aa17.33■□□□□ 0.37
CBWD3-218ENST00000622755 PLCH1Q4KWH8 1693 aa17.33■□□□□ 0.36
CBWD3-218ENST00000622755 PRDM11Q9NQV5 511 aa17.32■□□□□ 0.36
CBWD3-218ENST00000622755 COL14A1Q05707 1796 aaKnown RBP17.32■□□□□ 0.36
CBWD3-218ENST00000622755 SLIT2O94813 1529 aa17.32■□□□□ 0.36
CBWD3-218ENST00000622755 BCL9LQ86UU0 1499 aa17.32■□□□□ 0.36
CBWD3-218ENST00000622755 USP6P35125 1406 aa17.32■□□□□ 0.36
CBWD3-218ENST00000622755 TMC1Q8TDI8 760 aa17.31■□□□□ 0.36
CBWD3-218ENST00000622755 GJD4Q96KN9 370 aaPredicted RBP17.31■□□□□ 0.36
CBWD3-218ENST00000622755 MSH5O43196 834 aa17.3■□□□□ 0.36
CBWD3-218ENST00000622755 NUTM2GQ5VZR2 741 aa17.3■□□□□ 0.36
CBWD3-218ENST00000622755 HDGFL2Q7Z4V5 671 aaPredicted RBP17.3■□□□□ 0.36
CBWD3-218ENST00000622755 PHRF1Q9P1Y6 1649 aaKnown RBP17.3■□□□□ 0.36
CBWD3-218ENST00000622755 ST20-MTHFSA0A0A6YYL1 179 aa17.29■□□□□ 0.36
CBWD3-218ENST00000622755 NLRP6P59044 892 aa17.29■□□□□ 0.36
CBWD3-218ENST00000622755 CDCA8Q53HL2 280 aa17.29■□□□□ 0.36
CBWD3-218ENST00000622755 PUS7Q96PZ0 661 aaKnown RBP17.29■□□□□ 0.36
CBWD3-218ENST00000622755 TERF2IPQ9NYB0 399 aa17.29■□□□□ 0.36
CBWD3-218ENST00000622755 RGS12O14924 1447 aa17.28■□□□□ 0.36
CBWD3-218ENST00000622755 KTN1Q86UP2 1357 aaKnown RBP17.28■□□□□ 0.36
CBWD3-218ENST00000622755 USP47Q96K76 1375 aa17.28■□□□□ 0.36
CBWD3-218ENST00000622755 CRYBG1Q9Y4K1 1723 aa17.28■□□□□ 0.36
CBWD3-218ENST00000622755 TTC21AQ8NDW8 1320 aa17.28■□□□□ 0.36
CBWD3-218ENST00000622755 FAM83GA6ND36 823 aa17.28■□□□□ 0.36
CBWD3-218ENST00000622755 TMF1P82094 1093 aa17.28■□□□□ 0.36
CBWD3-218ENST00000622755 VPS72Q15906 364 aa17.28■□□□□ 0.36
CBWD3-218ENST00000622755 BTG4Q9NY30 223 aa17.28■□□□□ 0.36
CBWD3-218ENST00000622755 AKAP12Q02952 1782 aa17.28■□□□□ 0.36
CBWD3-218ENST00000622755 NINLQ9Y2I6 1382 aa17.27■□□□□ 0.35
CBWD3-218ENST00000622755 A0A0G2JS52 829 aa17.26■□□□□ 0.35
CBWD3-218ENST00000622755 ZC3H6P61129 1189 aaKnown RBP17.26■□□□□ 0.35
CBWD3-218ENST00000622755 MYT1Q01538 1121 aa17.26■□□□□ 0.35
CBWD3-218ENST00000622755 EVA1CP58658 441 aa17.25■□□□□ 0.35
CBWD3-218ENST00000622755 KIAA0232Q92628 1395 aa17.25■□□□□ 0.35
CBWD3-218ENST00000622755 KCNH5Q8NCM2 988 aa17.24■□□□□ 0.35
CBWD3-218ENST00000622755 USP19O94966 1318 aa17.24■□□□□ 0.35
CBWD3-218ENST00000622755 GCP02774 474 aa17.23■□□□□ 0.35
CBWD3-218ENST00000622755 NRKQ7Z2Y5 1582 aa17.23■□□□□ 0.35
CBWD3-218ENST00000622755 TTC21BQ7Z4L5 1316 aa17.23■□□□□ 0.35
CBWD3-218ENST00000622755 MON2Q7Z3U7 1717 aa17.23■□□□□ 0.35
CBWD3-218ENST00000622755 ZBTB7CA1YPR0 619 aa17.22■□□□□ 0.35
CBWD3-218ENST00000622755 NRAPQ86VF7 1730 aa17.22■□□□□ 0.35
CBWD3-218ENST00000622755 CPSF1Q10570 1443 aaKnown RBP17.22■□□□□ 0.35
CBWD3-218ENST00000622755 CPDO75976 1380 aa17.22■□□□□ 0.35
CBWD3-218ENST00000622755 STRN4Q9NRL3 753 aa17.21■□□□□ 0.35
CBWD3-218ENST00000622755 CHRNA2Q15822 529 aa17.21■□□□□ 0.34
CBWD3-218ENST00000622755 TESK2Q96S53 571 aa17.21■□□□□ 0.34
CBWD3-218ENST00000622755 PIK3C2AO00443 1686 aa17.2■□□□□ 0.34
CBWD3-218ENST00000622755 GLI3P10071 1580 aa17.2■□□□□ 0.34
CBWD3-218ENST00000622755 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.2■□□□□ 0.34
CBWD3-218ENST00000622755 SLC12A5Q9H2X9 1139 aa17.2■□□□□ 0.34
CBWD3-218ENST00000622755 EDC4Q6P2E9 1401 aaKnown RBP17.19■□□□□ 0.34
CBWD3-218ENST00000622755 SSH2Q76I76 1423 aa17.19■□□□□ 0.34
CBWD3-218ENST00000622755 UPF1Q92900 1129 aaKnown RBP eCLIP17.18■□□□□ 0.34
CBWD3-218ENST00000622755 SLIT3O75094 1523 aa17.18■□□□□ 0.34
CBWD3-218ENST00000622755 SEPT12Q8IYM1 358 aa17.17■□□□□ 0.34
CBWD3-218ENST00000622755 EIF4G2P78344 907 aaKnown RBP eCLIP17.16■□□□□ 0.34
CBWD3-218ENST00000622755 FAM98CQ17RN3 349 aaKnown RBP17.16■□□□□ 0.34
CBWD3-218ENST00000622755 SPATA31A5Q5VU36 1347 aa17.16■□□□□ 0.34
CBWD3-218ENST00000622755 SPATA31A7Q8IWB4 1347 aa17.16■□□□□ 0.34
CBWD3-218ENST00000622755 SOX12O15370 315 aa17.15■□□□□ 0.34
CBWD3-218ENST00000622755 CCDC125Q86Z20 511 aa17.15■□□□□ 0.34
CBWD3-218ENST00000622755 A0A1W2PP64 1363 aa17.15■□□□□ 0.34
CBWD3-218ENST00000622755 SF3B2Q13435 895 aaKnown RBP17.14■□□□□ 0.33
CBWD3-218ENST00000622755 AATKQ6ZMQ8 1374 aa17.14■□□□□ 0.33
CBWD3-218ENST00000622755 ONECUT3O60422 494 aaPredicted RBP17.13■□□□□ 0.33
CBWD3-218ENST00000622755 KRT27Q7Z3Y8 459 aa17.13■□□□□ 0.33
CBWD3-218ENST00000622755 USP35Q9P2H5 1018 aa17.13■□□□□ 0.33
CBWD3-218ENST00000622755 ANKRD36BQ8N2N9 1353 aa17.13■□□□□ 0.33
CBWD3-218ENST00000622755 SPATA31A1Q5TZJ5 1347 aa17.12■□□□□ 0.33
CBWD3-218ENST00000622755 USP31Q70CQ4 1352 aa17.12■□□□□ 0.33
CBWD3-218ENST00000622755 CD163L1Q9NR16 1453 aa17.12■□□□□ 0.33
CBWD3-218ENST00000622755 LMO7Q8WWI1 1683 aa17.12■□□□□ 0.33
CBWD3-218ENST00000622755 NME9Q86XW9 330 aa17.12■□□□□ 0.33
CBWD3-218ENST00000622755 THRAP3Q9Y2W1 955 aaKnown RBP17.12■□□□□ 0.33
CBWD3-218ENST00000622755 BRWD3Q6RI45 1802 aa17.11■□□□□ 0.33
CBWD3-218ENST00000622755 CAMTA1Q9Y6Y1 1673 aa17.11■□□□□ 0.33
CBWD3-218ENST00000622755 CSB-PGBD3P0DP91 1061 aa17.11■□□□□ 0.33
CBWD3-218ENST00000622755 COG3Q96JB2 828 aa17.11■□□□□ 0.33
CBWD3-218ENST00000622755 POLR3GLQ9BT43 218 aa17.11■□□□□ 0.33
CBWD3-218ENST00000622755 USP54Q70EL1 1684 aa17.1■□□□□ 0.33
CBWD3-218ENST00000622755 COL5A2P05997 1499 aaPredicted RBP17.1■□□□□ 0.33
CBWD3-218ENST00000622755 TOM1L2Q6ZVM7 507 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms