RNA–Protein interactions for RNA: ENST00000622656.1

PCDHGC3-207, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-207ENST00000622656 PHRF1Q9P1Y6 1649 aaKnown RBP14.64□□□□□ -0.07
PCDHGC3-207ENST00000622656 HAP1P54257 671 aaPredicted RBP14.64□□□□□ -0.07
PCDHGC3-207ENST00000622656 UNC5CLQ8IV45 518 aa14.64□□□□□ -0.07
PCDHGC3-207ENST00000622656 CABP2Q9NPB3 220 aa14.64□□□□□ -0.07
PCDHGC3-207ENST00000622656 ACEP12821 1306 aa14.64□□□□□ -0.07
PCDHGC3-207ENST00000622656 RALGAPBQ86X10 1494 aa14.63□□□□□ -0.07
PCDHGC3-207ENST00000622656 POLR3AO14802 1390 aaPredicted RBP14.63□□□□□ -0.07
PCDHGC3-207ENST00000622656 PAK3O75914 559 aaPredicted RBP14.63□□□□□ -0.07
PCDHGC3-207ENST00000622656 TRIM26Q12899 539 aaPredicted RBP14.63□□□□□ -0.07
PCDHGC3-207ENST00000622656 GJD4Q96KN9 370 aaPredicted RBP14.63□□□□□ -0.07
PCDHGC3-207ENST00000622656 NUTM2GQ5VZR2 741 aa14.62□□□□□ -0.07
PCDHGC3-207ENST00000622656 ROCK2O75116 1388 aaKnown RBP14.61□□□□□ -0.07
PCDHGC3-207ENST00000622656 COL14A1Q05707 1796 aaKnown RBP14.61□□□□□ -0.07
PCDHGC3-207ENST00000622656 PLEKHG3A1L390 1219 aa14.61□□□□□ -0.07
PCDHGC3-207ENST00000622656 CCDC61Q9Y6R9 512 aa14.61□□□□□ -0.07
PCDHGC3-207ENST00000622656 PPIP5K1Q6PFW1 1433 aa14.6□□□□□ -0.07
PCDHGC3-207ENST00000622656 SRPK2P78362 688 aaKnown RBP14.6□□□□□ -0.07
PCDHGC3-207ENST00000622656 VPS72Q15906 364 aa14.57□□□□□ -0.08
PCDHGC3-207ENST00000622656 BTG4Q9NY30 223 aa14.57□□□□□ -0.08
PCDHGC3-207ENST00000622656 CABP1Q9NZU7 370 aa14.57□□□□□ -0.08
PCDHGC3-207ENST00000622656 NRKQ7Z2Y5 1582 aa14.56□□□□□ -0.08
PCDHGC3-207ENST00000622656 AKAP12Q02952 1782 aa14.56□□□□□ -0.08
PCDHGC3-207ENST00000622656 CHRNA2Q15822 529 aa14.56□□□□□ -0.08
PCDHGC3-207ENST00000622656 KIAA0232Q92628 1395 aa14.56□□□□□ -0.08
PCDHGC3-207ENST00000622656 ZC3H6P61129 1189 aaKnown RBP14.55□□□□□ -0.08
PCDHGC3-207ENST00000622656 CCDC9Q9Y3X0 531 aaKnown RBP14.55□□□□□ -0.08
PCDHGC3-207ENST00000622656 ATAD2Q6PL18 1390 aa14.55□□□□□ -0.08
PCDHGC3-207ENST00000622656 TONSLQ96HA7 1378 aa14.54□□□□□ -0.08
PCDHGC3-207ENST00000622656 PIK3C2AO00443 1686 aa14.54□□□□□ -0.08
PCDHGC3-207ENST00000622656 USP6P35125 1406 aa14.53□□□□□ -0.08
PCDHGC3-207ENST00000622656 EVC2Q86UK5 1308 aa14.53□□□□□ -0.08
PCDHGC3-207ENST00000622656 SEPT12Q8IYM1 358 aa14.53□□□□□ -0.08
PCDHGC3-207ENST00000622656 ABTB2Q8N961 1025 aa14.53□□□□□ -0.08
PCDHGC3-207ENST00000622656 PRDM11Q9NQV5 511 aa14.53□□□□□ -0.08
PCDHGC3-207ENST00000622656 LMO7Q8WWI1 1683 aa14.52□□□□□ -0.08
PCDHGC3-207ENST00000622656 SSH2Q76I76 1423 aa14.52□□□□□ -0.08
PCDHGC3-207ENST00000622656 USP19O94966 1318 aa14.52□□□□□ -0.08
PCDHGC3-207ENST00000622656 ONECUT3O60422 494 aaPredicted RBP14.52□□□□□ -0.09
PCDHGC3-207ENST00000622656 CARD11Q9BXL7 1154 aa14.52□□□□□ -0.09
PCDHGC3-207ENST00000622656 CAMTA1Q9Y6Y1 1673 aa14.52□□□□□ -0.09
PCDHGC3-207ENST00000622656 FAM98CQ17RN3 349 aaKnown RBP14.51□□□□□ -0.09
PCDHGC3-207ENST00000622656 SPATA31A5Q5VU36 1347 aa14.5□□□□□ -0.09
PCDHGC3-207ENST00000622656 SPATA31A7Q8IWB4 1347 aa14.5□□□□□ -0.09
PCDHGC3-207ENST00000622656 THSD7AQ9UPZ6 1657 aa14.5□□□□□ -0.09
PCDHGC3-207ENST00000622656 MON2Q7Z3U7 1717 aa14.49□□□□□ -0.09
PCDHGC3-207ENST00000622656 RGPD5Q99666 1765 aa14.49□□□□□ -0.09
PCDHGC3-207ENST00000622656 COL18A1P39060 1754 aa14.48□□□□□ -0.09
PCDHGC3-207ENST00000622656 SLIT3O75094 1523 aa14.48□□□□□ -0.09
PCDHGC3-207ENST00000622656 GCP02774 474 aa14.48□□□□□ -0.09
PCDHGC3-207ENST00000622656 FAM182BQ5T319 152 aa14.48□□□□□ -0.09
PCDHGC3-207ENST00000622656 STRN4Q9NRL3 753 aa14.48□□□□□ -0.09
PCDHGC3-207ENST00000622656 CPSF1Q10570 1443 aaKnown RBP14.48□□□□□ -0.09
PCDHGC3-207ENST00000622656 SBNO2Q9Y2G9 1366 aa14.47□□□□□ -0.09
PCDHGC3-207ENST00000622656 CD163L1Q9NR16 1453 aa14.47□□□□□ -0.09
PCDHGC3-207ENST00000622656 NLRP13Q86W25 1043 aa14.47□□□□□ -0.09
PCDHGC3-207ENST00000622656 A0A0G2JS52 829 aa14.46□□□□□ -0.09
PCDHGC3-207ENST00000622656 NLRP6P59044 892 aa14.46□□□□□ -0.09
PCDHGC3-207ENST00000622656 MYT1Q01538 1121 aa14.46□□□□□ -0.09
PCDHGC3-207ENST00000622656 KRT27Q7Z3Y8 459 aa14.46□□□□□ -0.09
PCDHGC3-207ENST00000622656 BRD4O60885 1362 aaPredicted RBP14.46□□□□□ -0.1
PCDHGC3-207ENST00000622656 CPDO75976 1380 aa14.46□□□□□ -0.1
PCDHGC3-207ENST00000622656 SPATA31A1Q5TZJ5 1347 aa14.45□□□□□ -0.1
PCDHGC3-207ENST00000622656 TTC21BQ7Z4L5 1316 aa14.45□□□□□ -0.1
PCDHGC3-207ENST00000622656 LARP1Q6PKG0 1096 aaKnown RBP14.45□□□□□ -0.1
PCDHGC3-207ENST00000622656 ZRANB1Q9UGI0 708 aa14.45□□□□□ -0.1
PCDHGC3-207ENST00000622656 DEFB132Q7Z7B7 95 aa14.44□□□□□ -0.1
PCDHGC3-207ENST00000622656 TESK2Q96S53 571 aa14.44□□□□□ -0.1
PCDHGC3-207ENST00000622656 USP35Q9P2H5 1018 aa14.44□□□□□ -0.1
PCDHGC3-207ENST00000622656 SRCAPQ6ZRS2 3230 aa14.44□□□□□ -0.1
PCDHGC3-207ENST00000622656 BLMP54132 1417 aaPredicted RBP14.43□□□□□ -0.1
PCDHGC3-207ENST00000622656 ST20-MTHFSA0A0A6YYL1 179 aa14.43□□□□□ -0.1
PCDHGC3-207ENST00000622656 ZBTB7CA1YPR0 619 aa14.43□□□□□ -0.1
PCDHGC3-207ENST00000622656 SLC12A5Q9H2X9 1139 aa14.43□□□□□ -0.1
PCDHGC3-207ENST00000622656 KTN1Q86UP2 1357 aaKnown RBP14.43□□□□□ -0.1
PCDHGC3-207ENST00000622656 COL5A2P05997 1499 aaPredicted RBP14.43□□□□□ -0.1
PCDHGC3-207ENST00000622656 NFAT5O94916 1531 aa14.41□□□□□ -0.1
PCDHGC3-207ENST00000622656 SOX12O15370 315 aa14.41□□□□□ -0.1
PCDHGC3-207ENST00000622656 EVA1CP58658 441 aa14.41□□□□□ -0.1
PCDHGC3-207ENST00000622656 ZNF692Q9BU19 519 aaPredicted RBP14.41□□□□□ -0.1
PCDHGC3-207ENST00000622656 PCGF6Q9BYE7 350 aa14.41□□□□□ -0.1
PCDHGC3-207ENST00000622656 AXIN2Q9Y2T1 843 aa14.41□□□□□ -0.1
PCDHGC3-207ENST00000622656 USP54Q70EL1 1684 aa14.41□□□□□ -0.1
PCDHGC3-207ENST00000622656 TNS1Q9HBL0 1735 aaKnown RBP14.41□□□□□ -0.1
PCDHGC3-207ENST00000622656 CCDC125Q86Z20 511 aa14.4□□□□□ -0.1
PCDHGC3-207ENST00000622656 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.4□□□□□ -0.1
PCDHGC3-207ENST00000622656 TMC1Q8TDI8 760 aa14.4□□□□□ -0.1
PCDHGC3-207ENST00000622656 WNK3Q9BYP7 1800 aa14.39□□□□□ -0.11
PCDHGC3-207ENST00000622656 AATKQ6ZMQ8 1374 aa14.39□□□□□ -0.11
PCDHGC3-207ENST00000622656 NME9Q86XW9 330 aa14.39□□□□□ -0.11
PCDHGC3-207ENST00000622656 LTN1O94822 1766 aa14.39□□□□□ -0.11
PCDHGC3-207ENST00000622656 TTC21AQ8NDW8 1320 aa14.39□□□□□ -0.11
PCDHGC3-207ENST00000622656 RGPD1P0DJD0 1748 aa14.38□□□□□ -0.11
PCDHGC3-207ENST00000622656 A0A1W2PP64 1363 aa14.38□□□□□ -0.11
PCDHGC3-207ENST00000622656 ARHGEF25Q86VW2 580 aa14.38□□□□□ -0.11
PCDHGC3-207ENST00000622656 PARP4Q9UKK3 1724 aaKnown RBP14.38□□□□□ -0.11
PCDHGC3-207ENST00000622656 BARGINQ6ZT62 677 aa14.37□□□□□ -0.11
PCDHGC3-207ENST00000622656 CRB1P82279 1406 aa14.36□□□□□ -0.11
PCDHGC3-207ENST00000622656 TCP11L2Q8N4U5 519 aa14.36□□□□□ -0.11
PCDHGC3-207ENST00000622656 USP31Q70CQ4 1352 aa14.35□□□□□ -0.11
PCDHGC3-207ENST00000622656 USP47Q96K76 1375 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms