RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 SULT6B1Q6IMI4 303 aa16.25■□□□□ 0.19
SCAMP1-207ENST00000621999 PNISRQ8TF01 805 aaKnown RBP16.25■□□□□ 0.19
SCAMP1-207ENST00000621999 SLAIN2Q9P270 581 aa16.25■□□□□ 0.19
SCAMP1-207ENST00000621999 PER1O15534 1290 aaPredicted RBP16.24■□□□□ 0.19
SCAMP1-207ENST00000621999 KCNH5Q8NCM2 988 aa16.24■□□□□ 0.19
SCAMP1-207ENST00000621999 CABLES1Q8TDN4 633 aa16.24■□□□□ 0.19
SCAMP1-207ENST00000621999 ALKQ9UM73 1620 aa16.24■□□□□ 0.19
SCAMP1-207ENST00000621999 ADAMTS2O95450 1211 aa16.24■□□□□ 0.19
SCAMP1-207ENST00000621999 RIPK4P57078 832 aa16.24■□□□□ 0.19
SCAMP1-207ENST00000621999 PRKAR2BP31323 418 aa16.24■□□□□ 0.19
SCAMP1-207ENST00000621999 RAPGEF4Q8WZA2 1011 aa16.24■□□□□ 0.19
SCAMP1-207ENST00000621999 RUNDC1Q96C34 613 aa16.24■□□□□ 0.19
SCAMP1-207ENST00000621999 NEXMIFQ5QGS0 1516 aa16.22■□□□□ 0.19
SCAMP1-207ENST00000621999 C1orf141Q5JVX7 400 aa16.21■□□□□ 0.19
SCAMP1-207ENST00000621999 TCP11L2Q8N4U5 519 aa16.21■□□□□ 0.19
SCAMP1-207ENST00000621999 CHRNA2Q15822 529 aa16.21■□□□□ 0.19
SCAMP1-207ENST00000621999 TOM1L2Q6ZVM7 507 aa16.21■□□□□ 0.19
SCAMP1-207ENST00000621999 SBNO2Q9Y2G9 1366 aa16.2■□□□□ 0.18
SCAMP1-207ENST00000621999 ELL2O00472 640 aaPredicted RBP16.2■□□□□ 0.18
SCAMP1-207ENST00000621999 CALD1Q05682 793 aaKnown RBP16.2■□□□□ 0.18
SCAMP1-207ENST00000621999 ZBTB47Q9UFB7 747 aaPredicted RBP16.2■□□□□ 0.18
SCAMP1-207ENST00000621999 PIK3R4Q99570 1358 aa16.2■□□□□ 0.18
SCAMP1-207ENST00000621999 LMOD3Q0VAK6 560 aa16.2■□□□□ 0.18
SCAMP1-207ENST00000621999 CEP170BQ9Y4F5 1589 aaPredicted RBP16.19■□□□□ 0.18
SCAMP1-207ENST00000621999 MYH16Q9H6N6 1097 aa16.19■□□□□ 0.18
SCAMP1-207ENST00000621999 TTC21AQ8NDW8 1320 aa16.19■□□□□ 0.18
SCAMP1-207ENST00000621999 PRR36Q9H6K5 1346 aa16.18■□□□□ 0.18
SCAMP1-207ENST00000621999 TRPM1Q7Z4N2 1603 aa16.18■□□□□ 0.18
SCAMP1-207ENST00000621999 PLEKHG3A1L390 1219 aa16.18■□□□□ 0.18
SCAMP1-207ENST00000621999 HSP90AB2PQ58FF8 381 aa16.17■□□□□ 0.18
SCAMP1-207ENST00000621999 USHBP1Q8N6Y0 703 aa16.17■□□□□ 0.18
SCAMP1-207ENST00000621999 TEFQ10587 303 aa16.17■□□□□ 0.18
SCAMP1-207ENST00000621999 ASXL1Q8IXJ9 1541 aa16.17■□□□□ 0.18
SCAMP1-207ENST00000621999 FAM135BQ49AJ0 1406 aa16.16■□□□□ 0.18
SCAMP1-207ENST00000621999 ADAMTS13Q76LX8 1427 aa16.16■□□□□ 0.18
SCAMP1-207ENST00000621999 NSD2O96028 1365 aa16.16■□□□□ 0.18
SCAMP1-207ENST00000621999 TMEM131LA2VDJ0 1609 aa16.16■□□□□ 0.18
SCAMP1-207ENST00000621999 FTSJ3Q8IY81 847 aaKnown RBP16.16■□□□□ 0.18
SCAMP1-207ENST00000621999 BCORL1Q5H9F3 1711 aa16.16■□□□□ 0.18
SCAMP1-207ENST00000621999 SYTL4Q96C24 671 aaPredicted RBP16.15■□□□□ 0.18
SCAMP1-207ENST00000621999 SMG6Q86US8 1419 aaKnown RBP16.15■□□□□ 0.18
SCAMP1-207ENST00000621999 MROH2AA6NES4 1674 aa16.14■□□□□ 0.17
SCAMP1-207ENST00000621999 POLKQ9UBT6 870 aa16.14■□□□□ 0.17
SCAMP1-207ENST00000621999 ZBED9Q6R2W3 1325 aa16.14■□□□□ 0.17
SCAMP1-207ENST00000621999 GCP02774 474 aa16.14■□□□□ 0.17
SCAMP1-207ENST00000621999 CCDC136Q96JN2 1154 aa16.14■□□□□ 0.17
SCAMP1-207ENST00000621999 ZNF330Q9Y3S2 320 aaPredicted RBP16.14■□□□□ 0.17
SCAMP1-207ENST00000621999 RCAN3Q9UKA8 241 aa16.13■□□□□ 0.17
SCAMP1-207ENST00000621999 PDE3BQ13370 1112 aa16.13■□□□□ 0.17
SCAMP1-207ENST00000621999 NGLY1Q96IV0 654 aa16.12■□□□□ 0.17
SCAMP1-207ENST00000621999 LRRC59Q96AG4 307 aaKnown RBP16.11■□□□□ 0.17
SCAMP1-207ENST00000621999 TATP17735 454 aaPredicted RBP16.11■□□□□ 0.17
SCAMP1-207ENST00000621999 CDCA7LQ96GN5 454 aa16.11■□□□□ 0.17
SCAMP1-207ENST00000621999 SIGLEC1Q9BZZ2 1709 aa16.11■□□□□ 0.17
SCAMP1-207ENST00000621999 DDX54Q8TDD1 881 aaKnown RBP16.11■□□□□ 0.17
SCAMP1-207ENST00000621999 BCL2L13Q9BXK5 485 aa16.11■□□□□ 0.17
SCAMP1-207ENST00000621999 C3P01024 1663 aa16.11■□□□□ 0.17
SCAMP1-207ENST00000621999 FCHSD2O94868 740 aa16.1■□□□□ 0.17
SCAMP1-207ENST00000621999 EDC4Q6P2E9 1401 aaKnown RBP16.1■□□□□ 0.17
SCAMP1-207ENST00000621999 PLEKHO1Q53GL0 409 aaPredicted RBP16.1■□□□□ 0.17
SCAMP1-207ENST00000621999 PARD3Q8TEW0 1356 aa16.1■□□□□ 0.17
SCAMP1-207ENST00000621999 E9PSI1 815 aa16.09■□□□□ 0.17
SCAMP1-207ENST00000621999 TCERG1O14776 1098 aaKnown RBP16.09■□□□□ 0.17
SCAMP1-207ENST00000621999 ZNF530Q6P9A1 599 aaPredicted RBP16.09■□□□□ 0.17
SCAMP1-207ENST00000621999 KDM5AP29375 1690 aaKnown RBP16.09■□□□□ 0.17
SCAMP1-207ENST00000621999 MAP3K19Q56UN5 1328 aa16.08■□□□□ 0.17
SCAMP1-207ENST00000621999 GAS2L2Q8NHY3 880 aa16.08■□□□□ 0.17
SCAMP1-207ENST00000621999 SMC4Q9NTJ3 1288 aa16.08■□□□□ 0.16
SCAMP1-207ENST00000621999 ANKRD24Q8TF21 1146 aa16.08■□□□□ 0.16
SCAMP1-207ENST00000621999 PTPRUQ92729 1446 aa16.08■□□□□ 0.16
SCAMP1-207ENST00000621999 NECTIN2Q92692 538 aa16.07■□□□□ 0.16
SCAMP1-207ENST00000621999 CLUAP1Q96AJ1 413 aa16.06■□□□□ 0.16
SCAMP1-207ENST00000621999 SETBP1Q9Y6X0 1596 aa16.06■□□□□ 0.16
SCAMP1-207ENST00000621999 NRXN1Q9ULB1 1477 aa16.06■□□□□ 0.16
SCAMP1-207ENST00000621999 NGEFQ8N5V2 710 aa16.06■□□□□ 0.16
SCAMP1-207ENST00000621999 THUMPD2Q9BTF0 503 aaKnown RBP16.06■□□□□ 0.16
SCAMP1-207ENST00000621999 STK31Q9BXU1 1019 aa16.06■□□□□ 0.16
SCAMP1-207ENST00000621999 TSPYL4Q9UJ04 414 aa16.06■□□□□ 0.16
SCAMP1-207ENST00000621999 EIF4A2Q14240 407 aaKnown RBP16.05■□□□□ 0.16
SCAMP1-207ENST00000621999 MYO5BQ9ULV0 1848 aa16.05■□□□□ 0.16
SCAMP1-207ENST00000621999 PPLO60437 1756 aa16.05■□□□□ 0.16
SCAMP1-207ENST00000621999 EIF2S2P20042 333 aaKnown RBP16.05■□□□□ 0.16
SCAMP1-207ENST00000621999 TMPOP42166 694 aaKnown RBP16.04■□□□□ 0.16
SCAMP1-207ENST00000621999 TTC5Q8N0Z6 440 aa16.04■□□□□ 0.16
SCAMP1-207ENST00000621999 DCTN1Q14203 1278 aa16.04■□□□□ 0.16
SCAMP1-207ENST00000621999 AEBP1Q8IUX7 1158 aa16.04■□□□□ 0.16
SCAMP1-207ENST00000621999 ADGRL3Q9HAR2 1447 aa16.04■□□□□ 0.16
SCAMP1-207ENST00000621999 BRINP3Q76B58 766 aa16.04■□□□□ 0.16
SCAMP1-207ENST00000621999 C8orf37Q96NL8 207 aa16.03■□□□□ 0.16
SCAMP1-207ENST00000621999 GNAI1P63096 354 aa16.03■□□□□ 0.16
SCAMP1-207ENST00000621999 TSR2Q969E8 191 aaKnown RBP16.03■□□□□ 0.16
SCAMP1-207ENST00000621999 LAMC1P11047 1609 aa16.03■□□□□ 0.16
SCAMP1-207ENST00000621999 SPG7Q9UQ90 795 aa16.02■□□□□ 0.16
SCAMP1-207ENST00000621999 PLIN1O60240 522 aa16.02■□□□□ 0.15
SCAMP1-207ENST00000621999 NFE2L2Q16236 605 aa16.02■□□□□ 0.15
SCAMP1-207ENST00000621999 HOXC9P31274 260 aa16.01■□□□□ 0.15
SCAMP1-207ENST00000621999 MCM10Q7L590 875 aa16.01■□□□□ 0.15
SCAMP1-207ENST00000621999 ADGRB1O14514 1584 aa16.01■□□□□ 0.15
SCAMP1-207ENST00000621999 PHF23Q9BUL5 403 aaPredicted RBP16.01■□□□□ 0.15
SCAMP1-207ENST00000621999 FLT4P35916 1363 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms