RNA–Protein interactions for RNA: ENST00000620581.4

GRIA3-208, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 2,991 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-208ENST00000620581 ATF3P18847 181 aa18.53■□□□□ 0.56
GRIA3-208ENST00000620581 NSD3Q9BZ95 1437 aa18.52■□□□□ 0.55
GRIA3-208ENST00000620581 SOS2Q07890 1332 aaPredicted RBP18.52■□□□□ 0.55
GRIA3-208ENST00000620581 ARHGEF10O15013 1369 aa18.51■□□□□ 0.55
GRIA3-208ENST00000620581 USP19O94966 1318 aa18.51■□□□□ 0.55
GRIA3-208ENST00000620581 COL18A1P39060 1754 aa18.51■□□□□ 0.55
GRIA3-208ENST00000620581 LMO7Q8WWI1 1683 aa18.51■□□□□ 0.55
GRIA3-208ENST00000620581 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.5■□□□□ 0.55
GRIA3-208ENST00000620581 RGPD1P0DJD0 1748 aa18.5■□□□□ 0.55
GRIA3-208ENST00000620581 SRPK2P78362 688 aaKnown RBP18.5■□□□□ 0.55
GRIA3-208ENST00000620581 AMER1Q5JTC6 1135 aaPredicted RBP18.5■□□□□ 0.55
GRIA3-208ENST00000620581 PHF8Q9UPP1 1060 aa18.5■□□□□ 0.55
GRIA3-208ENST00000620581 NWD2Q9ULI1 1742 aa18.49■□□□□ 0.55
GRIA3-208ENST00000620581 RALBP1Q15311 655 aa18.49■□□□□ 0.55
GRIA3-208ENST00000620581 NPHP3Q7Z494 1330 aa18.49■□□□□ 0.55
GRIA3-208ENST00000620581 RTL1A6NKG5 1358 aa18.49■□□□□ 0.55
GRIA3-208ENST00000620581 CABP2Q9NPB3 220 aa18.49■□□□□ 0.55
GRIA3-208ENST00000620581 LTN1O94822 1766 aa18.48■□□□□ 0.55
GRIA3-208ENST00000620581 CDK12Q9NYV4 1490 aaPredicted RBP18.48■□□□□ 0.55
GRIA3-208ENST00000620581 CERKQ8TCT0 537 aa18.46■□□□□ 0.55
GRIA3-208ENST00000620581 ACEP12821 1306 aa18.46■□□□□ 0.55
GRIA3-208ENST00000620581 COL14A1Q05707 1796 aaKnown RBP18.46■□□□□ 0.55
GRIA3-208ENST00000620581 PLCH1Q4KWH8 1693 aa18.45■□□□□ 0.54
GRIA3-208ENST00000620581 PSME1Q06323 249 aa18.45■□□□□ 0.54
GRIA3-208ENST00000620581 SLAIN2Q9P270 581 aa18.45■□□□□ 0.54
GRIA3-208ENST00000620581 COL3A1P02461 1466 aaPredicted RBP18.45■□□□□ 0.54
GRIA3-208ENST00000620581 CARD14Q9BXL6 1004 aa18.44■□□□□ 0.54
GRIA3-208ENST00000620581 PANK3Q9H999 370 aa18.44■□□□□ 0.54
GRIA3-208ENST00000620581 TTC21BQ7Z4L5 1316 aa18.44■□□□□ 0.54
GRIA3-208ENST00000620581 CABP1Q9NZU7 370 aa18.43■□□□□ 0.54
GRIA3-208ENST00000620581 CPDO75976 1380 aa18.43■□□□□ 0.54
GRIA3-208ENST00000620581 NCAPD2Q15021 1401 aa18.43■□□□□ 0.54
GRIA3-208ENST00000620581 MAP2P11137 1827 aaKnown RBP18.43■□□□□ 0.54
GRIA3-208ENST00000620581 WNK3Q9BYP7 1800 aa18.43■□□□□ 0.54
GRIA3-208ENST00000620581 CCER2I3L3R5 266 aa18.43■□□□□ 0.54
GRIA3-208ENST00000620581 BRINP3Q76B58 766 aa18.43■□□□□ 0.54
GRIA3-208ENST00000620581 TOM1O60784 492 aa18.42■□□□□ 0.54
GRIA3-208ENST00000620581 PNPLA6Q8IY17 1366 aa18.42■□□□□ 0.54
GRIA3-208ENST00000620581 NRAPQ86VF7 1730 aa18.41■□□□□ 0.54
GRIA3-208ENST00000620581 PEAK1Q9H792 1746 aa18.41■□□□□ 0.54
GRIA3-208ENST00000620581 SLC12A5Q9H2X9 1139 aa18.4■□□□□ 0.54
GRIA3-208ENST00000620581 SPATA31A3Q5VYP0 1347 aa18.39■□□□□ 0.53
GRIA3-208ENST00000620581 HIRIP3Q9BW71 556 aaPredicted RBP18.39■□□□□ 0.53
GRIA3-208ENST00000620581 KNSTRNQ9Y448 316 aa18.39■□□□□ 0.53
GRIA3-208ENST00000620581 MYBBP1AQ9BQG0 1328 aaKnown RBP18.36■□□□□ 0.53
GRIA3-208ENST00000620581 BLMP54132 1417 aaPredicted RBP18.36■□□□□ 0.53
GRIA3-208ENST00000620581 SAFB2Q14151 953 aaKnown RBP eCLIP18.36■□□□□ 0.53
GRIA3-208ENST00000620581 NCBP3Q53F19 620 aaKnown RBP18.35■□□□□ 0.53
GRIA3-208ENST00000620581 PRKRIP1Q9H875 184 aaPredicted RBP18.35■□□□□ 0.53
GRIA3-208ENST00000620581 C14orf37Q86TY3 774 aa18.34■□□□□ 0.53
GRIA3-208ENST00000620581 FYB1O15117 783 aa18.34■□□□□ 0.53
GRIA3-208ENST00000620581 KCNH5Q8NCM2 988 aa18.32■□□□□ 0.52
GRIA3-208ENST00000620581 DDX10Q13206 875 aaKnown RBP18.31■□□□□ 0.52
GRIA3-208ENST00000620581 ESCO1Q5FWF5 840 aa18.31■□□□□ 0.52
GRIA3-208ENST00000620581 NGDNQ8NEJ9 315 aaKnown RBP18.31■□□□□ 0.52
GRIA3-208ENST00000620581 KRT28Q7Z3Y7 464 aa18.3■□□□□ 0.52
GRIA3-208ENST00000620581 DIEXFQ68CQ4 756 aaKnown RBP18.3■□□□□ 0.52
GRIA3-208ENST00000620581 ORAI2Q96SN7 254 aa18.29■□□□□ 0.52
GRIA3-208ENST00000620581 TMC1Q8TDI8 760 aa18.28■□□□□ 0.52
GRIA3-208ENST00000620581 PKD1L3Q7Z443 1732 aa18.28■□□□□ 0.52
GRIA3-208ENST00000620581 NLRP13Q86W25 1043 aa18.28■□□□□ 0.52
GRIA3-208ENST00000620581 PARP4Q9UKK3 1724 aaKnown RBP18.28■□□□□ 0.52
GRIA3-208ENST00000620581 JCADQ9P266 1359 aa18.28■□□□□ 0.52
GRIA3-208ENST00000620581 ANP32CO43423 234 aa18.27■□□□□ 0.52
GRIA3-208ENST00000620581 ADAMTS7Q9UKP4 1686 aa18.27■□□□□ 0.52
GRIA3-208ENST00000620581 LRRC59Q96AG4 307 aaKnown RBP18.27■□□□□ 0.51
GRIA3-208ENST00000620581 SPATA31A6Q5VVP1 1343 aa18.27■□□□□ 0.51
GRIA3-208ENST00000620581 COG3Q96JB2 828 aa18.26■□□□□ 0.51
GRIA3-208ENST00000620581 FLT4P35916 1363 aa18.24■□□□□ 0.51
GRIA3-208ENST00000620581 RGPD5Q99666 1765 aa18.22■□□□□ 0.51
GRIA3-208ENST00000620581 PPP2R1AP30153 589 aa18.22■□□□□ 0.51
GRIA3-208ENST00000620581 SLIT2O94813 1529 aa18.2■□□□□ 0.5
GRIA3-208ENST00000620581 MORC1Q86VD1 984 aa18.2■□□□□ 0.5
GRIA3-208ENST00000620581 PMFBP1Q8TBY8 1022 aa18.19■□□□□ 0.5
GRIA3-208ENST00000620581 NGEFQ8N5V2 710 aa18.19■□□□□ 0.5
GRIA3-208ENST00000620581 SENP3Q9H4L4 574 aaPredicted RBP18.19■□□□□ 0.5
GRIA3-208ENST00000620581 LRRC37A3O60309 1634 aa18.19■□□□□ 0.5
GRIA3-208ENST00000620581 KDRP35968 1356 aa18.19■□□□□ 0.5
GRIA3-208ENST00000620581 NME9Q86XW9 330 aa18.18■□□□□ 0.5
GRIA3-208ENST00000620581 LRP6O75581 1613 aa18.18■□□□□ 0.5
GRIA3-208ENST00000620581 ARHGEF25Q86VW2 580 aa18.17■□□□□ 0.5
GRIA3-208ENST00000620581 UBAP1LF5GYI3 381 aa18.16■□□□□ 0.5
GRIA3-208ENST00000620581 FOXO3O43524 673 aa18.16■□□□□ 0.5
GRIA3-208ENST00000620581 OVOS2A0A0G2JMS6 1433 aa18.15■□□□□ 0.5
GRIA3-208ENST00000620581 THSD7AQ9UPZ6 1657 aa18.15■□□□□ 0.5
GRIA3-208ENST00000620581 SHANK3Q9BYB0 1731 aa18.15■□□□□ 0.5
GRIA3-208ENST00000620581 FBXO41Q8TF61 875 aa18.15■□□□□ 0.5
GRIA3-208ENST00000620581 RBM33Q96EV2 1170 aaKnown RBP18.15■□□□□ 0.5
GRIA3-208ENST00000620581 IP6K1Q92551 441 aa18.15■□□□□ 0.5
GRIA3-208ENST00000620581 COL5A2P05997 1499 aaPredicted RBP18.14■□□□□ 0.49
GRIA3-208ENST00000620581 ABTB2Q8N961 1025 aa18.14■□□□□ 0.49
GRIA3-208ENST00000620581 POLKQ9UBT6 870 aa18.14■□□□□ 0.49
GRIA3-208ENST00000620581 CFAP53Q96M91 514 aa18.13■□□□□ 0.49
GRIA3-208ENST00000620581 RGPD2P0DJD1 1756 aa18.12■□□□□ 0.49
GRIA3-208ENST00000620581 CICQ96RK0 1608 aaPredicted RBP18.12■□□□□ 0.49
GRIA3-208ENST00000620581 GCP02774 474 aa18.11■□□□□ 0.49
GRIA3-208ENST00000620581 NLRP6P59044 892 aa18.11■□□□□ 0.49
GRIA3-208ENST00000620581 GGNBP2Q9H3C7 697 aa18.1■□□□□ 0.49
GRIA3-208ENST00000620581 VIRMAQ69YN4 1812 aaKnown RBP18.1■□□□□ 0.49
GRIA3-208ENST00000620581 SIPA1L3O60292 1781 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms