RNA–Protein interactions for RNA: ENST00000619890.1

SSX4B-202, Transcript of SSX family member 4B, humanhuman

TSL 5 BASIC

Gene SSX4B, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-202ENST00000619890 RPGRIP1LQ68CZ1 1315 aa8.93□□□□□ -0.98
SSX4B-202ENST00000619890 SPATA31E1Q6ZUB1 1445 aa8.93□□□□□ -0.98
SSX4B-202ENST00000619890 COL22A1Q8NFW1 1626 aaPredicted RBP8.92□□□□□ -0.98
SSX4B-202ENST00000619890 PRAG1Q86YV5 1406 aa8.92□□□□□ -0.98
SSX4B-202ENST00000619890 SPON1Q9HCB6 807 aa8.92□□□□□ -0.98
SSX4B-202ENST00000619890 CREBZFQ9NS37 354 aa8.92□□□□□ -0.98
SSX4B-202ENST00000619890 ANKRD30BQ9BXX2 1392 aa8.91□□□□□ -0.98
SSX4B-202ENST00000619890 NINLQ9Y2I6 1382 aa8.91□□□□□ -0.98
SSX4B-202ENST00000619890 KCNQ2O43526 872 aa8.91□□□□□ -0.98
SSX4B-202ENST00000619890 FAM182BQ5T319 152 aa8.91□□□□□ -0.98
SSX4B-202ENST00000619890 KNDC1Q76NI1 1749 aa8.91□□□□□ -0.98
SSX4B-202ENST00000619890 DISP2A7MBM2 1401 aa8.9□□□□□ -0.98
SSX4B-202ENST00000619890 METP08581 1390 aa8.9□□□□□ -0.98
SSX4B-202ENST00000619890 CCDC9Q9Y3X0 531 aaKnown RBP8.9□□□□□ -0.98
SSX4B-202ENST00000619890 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.89□□□□□ -0.99
SSX4B-202ENST00000619890 NPHP3Q7Z494 1330 aa8.89□□□□□ -0.99
SSX4B-202ENST00000619890 VGFO15240 615 aaPredicted RBP8.89□□□□□ -0.99
SSX4B-202ENST00000619890 FOXO3O43524 673 aa8.89□□□□□ -0.99
SSX4B-202ENST00000619890 XPCQ01831 940 aaPredicted RBP8.89□□□□□ -0.99
SSX4B-202ENST00000619890 PIK3C2GO75747 1445 aa8.88□□□□□ -0.99
SSX4B-202ENST00000619890 NALCNQ8IZF0 1738 aa8.88□□□□□ -0.99
SSX4B-202ENST00000619890 A0A0G2JS52 829 aa8.88□□□□□ -0.99
SSX4B-202ENST00000619890 MYT1Q01538 1121 aa8.88□□□□□ -0.99
SSX4B-202ENST00000619890 FAM98CQ17RN3 349 aaKnown RBP8.88□□□□□ -0.99
SSX4B-202ENST00000619890 ESCO1Q5FWF5 840 aa8.88□□□□□ -0.99
SSX4B-202ENST00000619890 ZNF579Q8NAF0 562 aaKnown RBP8.88□□□□□ -0.99
SSX4B-202ENST00000619890 NRXN1Q9ULB1 1477 aa8.88□□□□□ -0.99
SSX4B-202ENST00000619890 NBPF8Q3BBV2 869 aa8.87□□□□□ -0.99
SSX4B-202ENST00000619890 NBPF14Q5TI25 921 aa8.87□□□□□ -0.99
SSX4B-202ENST00000619890 MARF1Q9Y4F3 1742 aaKnown RBP8.86□□□□□ -0.99
SSX4B-202ENST00000619890 PXDNQ92626 1479 aa8.86□□□□□ -0.99
SSX4B-202ENST00000619890 TECPR2O15040 1411 aa8.86□□□□□ -0.99
SSX4B-202ENST00000619890 CAMTA1Q9Y6Y1 1673 aa8.85□□□□□ -0.99
SSX4B-202ENST00000619890 GIGYF1O75420 1035 aaPredicted RBP8.85□□□□□ -0.99
SSX4B-202ENST00000619890 TRIM37O94972 964 aa8.85□□□□□ -0.99
SSX4B-202ENST00000619890 APBA3O96018 575 aa8.85□□□□□ -0.99
SSX4B-202ENST00000619890 CDC42BPGQ6DT37 1551 aa8.85□□□□□ -0.99
SSX4B-202ENST00000619890 SPATA31A3Q5VYP0 1347 aa8.84□□□□□ -0.99
SSX4B-202ENST00000619890 PARD3Q8TEW0 1356 aa8.84□□□□□ -0.99
SSX4B-202ENST00000619890 FAM83GA6ND36 823 aa8.83□□□□□ -1
SSX4B-202ENST00000619890 CABLES1Q8TDN4 633 aa8.83□□□□□ -1
SSX4B-202ENST00000619890 KIAA1210Q9ULL0 1709 aa8.83□□□□□ -1
SSX4B-202ENST00000619890 LHX8Q68G74 356 aa8.82□□□□□ -1
SSX4B-202ENST00000619890 FAM196AQ6ZSG2 479 aa8.82□□□□□ -1
SSX4B-202ENST00000619890 STAC3Q96MF2 364 aa8.82□□□□□ -1
SSX4B-202ENST00000619890 LRPPRCP42704 1394 aaKnown RBP8.82□□□□□ -1
SSX4B-202ENST00000619890 ROBO2Q9HCK4 1378 aa8.82□□□□□ -1
SSX4B-202ENST00000619890 RGPD1P0DJD0 1748 aa8.82□□□□□ -1
SSX4B-202ENST00000619890 DLC1Q96QB1 1528 aa8.81□□□□□ -1
SSX4B-202ENST00000619890 HAP1P54257 671 aaPredicted RBP8.81□□□□□ -1
SSX4B-202ENST00000619890 RGL3Q3MIN7 710 aa8.81□□□□□ -1
SSX4B-202ENST00000619890 PROM2Q8N271 834 aa8.81□□□□□ -1
SSX4B-202ENST00000619890 SYT17Q9BSW7 474 aa8.81□□□□□ -1
SSX4B-202ENST00000619890 ADGRF5Q8IZF2 1346 aa8.8□□□□□ -1
SSX4B-202ENST00000619890 PAK3O75914 559 aaPredicted RBP8.8□□□□□ -1
SSX4B-202ENST00000619890 POTEIP0CG38 1075 aa8.8□□□□□ -1
SSX4B-202ENST00000619890 KRT28Q7Z3Y7 464 aa8.8□□□□□ -1
SSX4B-202ENST00000619890 ADGRB1O14514 1584 aa8.8□□□□□ -1
SSX4B-202ENST00000619890 YTHDC2Q9H6S0 1430 aaKnown RBP8.8□□□□□ -1
SSX4B-202ENST00000619890 ADGRB2O60241 1585 aa8.79□□□□□ -1
SSX4B-202ENST00000619890 ABCC11Q96J66 1382 aa8.79□□□□□ -1
SSX4B-202ENST00000619890 PLEKHG5O94827 1062 aa8.79□□□□□ -1
SSX4B-202ENST00000619890 PTGER2P43116 358 aa8.79□□□□□ -1
SSX4B-202ENST00000619890 TRIM26Q12899 539 aaPredicted RBP8.79□□□□□ -1
SSX4B-202ENST00000619890 BTG4Q9NY30 223 aa8.79□□□□□ -1
SSX4B-202ENST00000619890 TNS1Q9HBL0 1735 aaKnown RBP8.79□□□□□ -1
SSX4B-202ENST00000619890 FMN2Q9NZ56 1722 aa8.79□□□□□ -1
SSX4B-202ENST00000619890 USP32Q8NFA0 1604 aa8.79□□□□□ -1
SSX4B-202ENST00000619890 SPATA31A5Q5VU36 1347 aa8.79□□□□□ -1
SSX4B-202ENST00000619890 SPATA31A7Q8IWB4 1347 aa8.79□□□□□ -1
SSX4B-202ENST00000619890 ARHGEF28Q8N1W1 1705 aaKnown RBP8.78□□□□□ -1
SSX4B-202ENST00000619890 NUTM2FA1L443 756 aa8.78□□□□□ -1
SSX4B-202ENST00000619890 FHDC1Q9C0D6 1143 aaPredicted RBP8.78□□□□□ -1
SSX4B-202ENST00000619890 PDGFDQ9GZP0 370 aaPredicted RBP8.78□□□□□ -1
SSX4B-202ENST00000619890 KIF1AQ12756 1690 aa8.78□□□□□ -1
SSX4B-202ENST00000619890 DHX57Q6P158 1386 aaKnown RBP8.77□□□□□ -1.01
SSX4B-202ENST00000619890 MNX1P50219 401 aaPredicted RBP8.77□□□□□ -1.01
SSX4B-202ENST00000619890 DCBLD2Q96PD2 775 aa8.77□□□□□ -1.01
SSX4B-202ENST00000619890 C14orf93Q9H972 538 aaKnown RBP8.77□□□□□ -1.01
SSX4B-202ENST00000619890 ZBTB7AO95365 584 aa8.76□□□□□ -1.01
SSX4B-202ENST00000619890 GOLGB1Q14789 3259 aaKnown RBP8.76□□□□□ -1.01
SSX4B-202ENST00000619890 NWD2Q9ULI1 1742 aa8.75□□□□□ -1.01
SSX4B-202ENST00000619890 DCAF11Q8TEB1 546 aa8.75□□□□□ -1.01
SSX4B-202ENST00000619890 SIRT1Q96EB6 747 aa8.75□□□□□ -1.01
SSX4B-202ENST00000619890 ITSN1Q15811 1721 aa8.74□□□□□ -1.01
SSX4B-202ENST00000619890 TRPM1Q7Z4N2 1603 aa8.74□□□□□ -1.01
SSX4B-202ENST00000619890 SLC34A2O95436 690 aa8.74□□□□□ -1.01
SSX4B-202ENST00000619890 HSPA6P17066 643 aa8.74□□□□□ -1.01
SSX4B-202ENST00000619890 PSME1Q06323 249 aa8.74□□□□□ -1.01
SSX4B-202ENST00000619890 LMOD2Q6P5Q4 547 aa8.74□□□□□ -1.01
SSX4B-202ENST00000619890 PLCH1Q4KWH8 1693 aa8.74□□□□□ -1.01
SSX4B-202ENST00000619890 CHD4Q14839 1912 aa8.74□□□□□ -1.01
SSX4B-202ENST00000619890 EIF3AQ14152 1382 aaKnown RBP8.73□□□□□ -1.01
SSX4B-202ENST00000619890 RREB1Q92766 1687 aa8.73□□□□□ -1.01
SSX4B-202ENST00000619890 CFAP70Q5T0N1 1121 aa8.73□□□□□ -1.01
SSX4B-202ENST00000619890 ANO8Q9HCE9 1232 aaPredicted RBP8.73□□□□□ -1.01
SSX4B-202ENST00000619890 NUP188Q5SRE5 1749 aa8.73□□□□□ -1.01
SSX4B-202ENST00000619890 NRKQ7Z2Y5 1582 aa8.73□□□□□ -1.01
SSX4B-202ENST00000619890 GPR162Q16538 588 aa8.72□□□□□ -1.01
SSX4B-202ENST00000619890 TMEM132EQ6IEE7 984 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms