RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 ATP7BP35670 1465 aa16.21■□□□□ 0.19
TARDBP-221ENST00000619555 ZRANB1Q9UGI0 708 aa16.19■□□□□ 0.18
TARDBP-221ENST00000619555 NRAPQ86VF7 1730 aa16.18■□□□□ 0.18
TARDBP-221ENST00000619555 KIAA1210Q9ULL0 1709 aa16.18■□□□□ 0.18
TARDBP-221ENST00000619555 ITSN1Q15811 1721 aa16.17■□□□□ 0.18
TARDBP-221ENST00000619555 A0A0G2JS52 829 aa16.17■□□□□ 0.18
TARDBP-221ENST00000619555 MYT1Q01538 1121 aa16.17■□□□□ 0.18
TARDBP-221ENST00000619555 FAM98CQ17RN3 349 aaKnown RBP16.17■□□□□ 0.18
TARDBP-221ENST00000619555 NUTM2GQ5VZR2 741 aa16.17■□□□□ 0.18
TARDBP-221ENST00000619555 KRT27Q7Z3Y8 459 aa16.17■□□□□ 0.18
TARDBP-221ENST00000619555 DEFB132Q7Z7B7 95 aa16.17■□□□□ 0.18
TARDBP-221ENST00000619555 BLMP54132 1417 aaPredicted RBP16.17■□□□□ 0.18
TARDBP-221ENST00000619555 COL14A1Q05707 1796 aaKnown RBP16.16■□□□□ 0.18
TARDBP-221ENST00000619555 NBPF8Q3BBV2 869 aa16.16■□□□□ 0.18
TARDBP-221ENST00000619555 CCDC61Q9Y6R9 512 aa16.16■□□□□ 0.18
TARDBP-221ENST00000619555 CRYBG1Q9Y4K1 1723 aa16.16■□□□□ 0.18
TARDBP-221ENST00000619555 ACEP12821 1306 aa16.16■□□□□ 0.18
TARDBP-221ENST00000619555 PRDM11Q9NQV5 511 aa16.15■□□□□ 0.18
TARDBP-221ENST00000619555 PLEKHG3A1L390 1219 aa16.14■□□□□ 0.17
TARDBP-221ENST00000619555 CHRNA2Q15822 529 aa16.14■□□□□ 0.17
TARDBP-221ENST00000619555 SPATA31A5Q5VU36 1347 aa16.14■□□□□ 0.17
TARDBP-221ENST00000619555 SPATA31A7Q8IWB4 1347 aa16.14■□□□□ 0.17
TARDBP-221ENST00000619555 POLR3AO14802 1390 aaPredicted RBP16.13■□□□□ 0.17
TARDBP-221ENST00000619555 KIAA0232Q92628 1395 aa16.13■□□□□ 0.17
TARDBP-221ENST00000619555 ZC3H6P61129 1189 aaKnown RBP16.13■□□□□ 0.17
TARDBP-221ENST00000619555 SF3B2Q13435 895 aaKnown RBP16.13■□□□□ 0.17
TARDBP-221ENST00000619555 TOPAZ1Q8N9V7 1692 aa16.12■□□□□ 0.17
TARDBP-221ENST00000619555 L3MBTL2Q969R5 705 aa16.12■□□□□ 0.17
TARDBP-221ENST00000619555 SIN3AQ96ST3 1273 aa16.12■□□□□ 0.17
TARDBP-221ENST00000619555 CABP2Q9NPB3 220 aa16.12■□□□□ 0.17
TARDBP-221ENST00000619555 CENPJQ9HC77 1338 aaPredicted RBP16.12■□□□□ 0.17
TARDBP-221ENST00000619555 SRPK2P78362 688 aaKnown RBP16.11■□□□□ 0.17
TARDBP-221ENST00000619555 FAM182BQ5T319 152 aa16.1■□□□□ 0.17
TARDBP-221ENST00000619555 ABTB2Q8N961 1025 aa16.1■□□□□ 0.17
TARDBP-221ENST00000619555 STRN4Q9NRL3 753 aa16.1■□□□□ 0.17
TARDBP-221ENST00000619555 PHRF1Q9P1Y6 1649 aaKnown RBP16.09■□□□□ 0.17
TARDBP-221ENST00000619555 SPATA31A1Q5TZJ5 1347 aa16.08■□□□□ 0.16
TARDBP-221ENST00000619555 PPIP5K1Q6PFW1 1433 aa16.08■□□□□ 0.16
TARDBP-221ENST00000619555 NEUROD1Q13562 356 aa16.07■□□□□ 0.16
TARDBP-221ENST00000619555 TRIM26Q12899 539 aaPredicted RBP16.06■□□□□ 0.16
TARDBP-221ENST00000619555 CABP1Q9NZU7 370 aa16.06■□□□□ 0.16
TARDBP-221ENST00000619555 QRICH2Q9H0J4 1663 aa16.05■□□□□ 0.16
TARDBP-221ENST00000619555 THSD7AQ9UPZ6 1657 aa16.05■□□□□ 0.16
TARDBP-221ENST00000619555 BAG6P46379 1132 aa16.05■□□□□ 0.16
TARDBP-221ENST00000619555 EVA1CP58658 441 aa16.05■□□□□ 0.16
TARDBP-221ENST00000619555 USP35Q9P2H5 1018 aa16.05■□□□□ 0.16
TARDBP-221ENST00000619555 USP19O94966 1318 aa16.04■□□□□ 0.16
TARDBP-221ENST00000619555 NLRP13Q86W25 1043 aa16.04■□□□□ 0.16
TARDBP-221ENST00000619555 NRKQ7Z2Y5 1582 aa16.04■□□□□ 0.16
TARDBP-221ENST00000619555 CAMTA1Q9Y6Y1 1673 aa16.03■□□□□ 0.16
TARDBP-221ENST00000619555 GCP02774 474 aa16.03■□□□□ 0.16
TARDBP-221ENST00000619555 EN1Q05925 392 aaPredicted RBP16.03■□□□□ 0.16
TARDBP-221ENST00000619555 LARP1Q6PKG0 1096 aaKnown RBP16.03■□□□□ 0.16
TARDBP-221ENST00000619555 SSH2Q76I76 1423 aa16.02■□□□□ 0.16
TARDBP-221ENST00000619555 CPDO75976 1380 aa16.01■□□□□ 0.15
TARDBP-221ENST00000619555 TRPM1Q7Z4N2 1603 aa16.01■□□□□ 0.15
TARDBP-221ENST00000619555 PSDA5PKW4 1024 aaPredicted RBP16.01■□□□□ 0.15
TARDBP-221ENST00000619555 EVC2Q86UK5 1308 aa16■□□□□ 0.15
TARDBP-221ENST00000619555 ZBTB7CA1YPR0 619 aa16■□□□□ 0.15
TARDBP-221ENST00000619555 NLRP6P59044 892 aa16■□□□□ 0.15
TARDBP-221ENST00000619555 BARGINQ6ZT62 677 aa16■□□□□ 0.15
TARDBP-221ENST00000619555 USP6P35125 1406 aa16■□□□□ 0.15
TARDBP-221ENST00000619555 BRD4O60885 1362 aaPredicted RBP16■□□□□ 0.15
TARDBP-221ENST00000619555 ROCK2O75116 1388 aaKnown RBP16■□□□□ 0.15
TARDBP-221ENST00000619555 RGPD1P0DJD0 1748 aa15.99■□□□□ 0.15
TARDBP-221ENST00000619555 LMO7Q8WWI1 1683 aa15.99■□□□□ 0.15
TARDBP-221ENST00000619555 TRIM37O94972 964 aa15.99■□□□□ 0.15
TARDBP-221ENST00000619555 FAM196AQ6ZSG2 479 aa15.99■□□□□ 0.15
TARDBP-221ENST00000619555 TCP11L2Q8N4U5 519 aa15.99■□□□□ 0.15
TARDBP-221ENST00000619555 PDE3BQ13370 1112 aa15.97■□□□□ 0.15
TARDBP-221ENST00000619555 TNS1Q9HBL0 1735 aaKnown RBP15.97■□□□□ 0.15
TARDBP-221ENST00000619555 ADRA2BP18089 450 aa15.96■□□□□ 0.15
TARDBP-221ENST00000619555 EZH2Q15910 746 aaKnown RBP15.96■□□□□ 0.15
TARDBP-221ENST00000619555 DISP2A7MBM2 1401 aa15.95■□□□□ 0.14
TARDBP-221ENST00000619555 COL5A2P05997 1499 aaPredicted RBP15.95■□□□□ 0.14
TARDBP-221ENST00000619555 TTC21BQ7Z4L5 1316 aa15.94■□□□□ 0.14
TARDBP-221ENST00000619555 APBA3O96018 575 aa15.94■□□□□ 0.14
TARDBP-221ENST00000619555 CAMKK2Q96RR4 588 aa15.94■□□□□ 0.14
TARDBP-221ENST00000619555 ZNF692Q9BU19 519 aaPredicted RBP15.94■□□□□ 0.14
TARDBP-221ENST00000619555 THRAP3Q9Y2W1 955 aaKnown RBP15.94■□□□□ 0.14
TARDBP-221ENST00000619555 PIK3C2AO00443 1686 aa15.94■□□□□ 0.14
TARDBP-221ENST00000619555 SLIT3O75094 1523 aa15.94■□□□□ 0.14
TARDBP-221ENST00000619555 AATKQ6ZMQ8 1374 aa15.93■□□□□ 0.14
TARDBP-221ENST00000619555 R3HDM1Q15032 1099 aaKnown RBP15.93■□□□□ 0.14
TARDBP-221ENST00000619555 SOX12O15370 315 aa15.92■□□□□ 0.14
TARDBP-221ENST00000619555 AXIN2Q9Y2T1 843 aa15.92■□□□□ 0.14
TARDBP-221ENST00000619555 CRB1P82279 1406 aa15.92■□□□□ 0.14
TARDBP-221ENST00000619555 COL18A1P39060 1754 aa15.91■□□□□ 0.14
TARDBP-221ENST00000619555 AKAP12Q02952 1782 aa15.91■□□□□ 0.14
TARDBP-221ENST00000619555 TOM1L2Q6ZVM7 507 aa15.9■□□□□ 0.14
TARDBP-221ENST00000619555 ARHGEF25Q86VW2 580 aa15.9■□□□□ 0.14
TARDBP-221ENST00000619555 CARD11Q9BXL7 1154 aa15.9■□□□□ 0.14
TARDBP-221ENST00000619555 CPSF1Q10570 1443 aaKnown RBP15.89■□□□□ 0.13
TARDBP-221ENST00000619555 LRP5O75197 1615 aa15.89■□□□□ 0.13
TARDBP-221ENST00000619555 TTC21AQ8NDW8 1320 aa15.89■□□□□ 0.13
TARDBP-221ENST00000619555 KTN1Q86UP2 1357 aaKnown RBP15.88■□□□□ 0.13
TARDBP-221ENST00000619555 PARP4Q9UKK3 1724 aaKnown RBP15.88■□□□□ 0.13
TARDBP-221ENST00000619555 KCNH5Q8NCM2 988 aa15.88■□□□□ 0.13
TARDBP-221ENST00000619555 WDR17Q8IZU2 1322 aa15.88■□□□□ 0.13
TARDBP-221ENST00000619555 PCGF6Q9BYE7 350 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms