RNA–Protein interactions for RNA: ENST00000619053.1

AP001059.3-201, humanhuman

BASIC

Gene AP001059.3, Length 235 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001059.3-201ENST00000619053 SRPK2P78362 688 aaKnown RBP23.39■■□□□ 1.33
AP001059.3-201ENST00000619053 ACEP12821 1306 aa23.38■■□□□ 1.33
AP001059.3-201ENST00000619053 RALGAPBQ86X10 1494 aa23.38■■□□□ 1.33
AP001059.3-201ENST00000619053 UNC5CLQ8IV45 518 aa23.37■■□□□ 1.33
AP001059.3-201ENST00000619053 COL14A1Q05707 1796 aaKnown RBP23.37■■□□□ 1.33
AP001059.3-201ENST00000619053 EVC2Q86UK5 1308 aa23.36■■□□□ 1.33
AP001059.3-201ENST00000619053 PPIP5K1Q6PFW1 1433 aa23.36■■□□□ 1.33
AP001059.3-201ENST00000619053 PHRF1Q9P1Y6 1649 aaKnown RBP23.35■■□□□ 1.33
AP001059.3-201ENST00000619053 PAK3O75914 559 aaPredicted RBP23.35■■□□□ 1.33
AP001059.3-201ENST00000619053 CABP2Q9NPB3 220 aa23.35■■□□□ 1.33
AP001059.3-201ENST00000619053 NRAPQ86VF7 1730 aa23.34■■□□□ 1.33
AP001059.3-201ENST00000619053 BRD4O60885 1362 aaPredicted RBP23.34■■□□□ 1.33
AP001059.3-201ENST00000619053 SBNO2Q9Y2G9 1366 aa23.34■■□□□ 1.33
AP001059.3-201ENST00000619053 GJD4Q96KN9 370 aaPredicted RBP23.33■■□□□ 1.33
AP001059.3-201ENST00000619053 GLI3P10071 1580 aa23.32■■□□□ 1.32
AP001059.3-201ENST00000619053 FAM83GA6ND36 823 aa23.31■■□□□ 1.32
AP001059.3-201ENST00000619053 PLEKHG5O94827 1062 aa23.31■■□□□ 1.32
AP001059.3-201ENST00000619053 UPF1Q92900 1129 aaKnown RBP eCLIP23.31■■□□□ 1.32
AP001059.3-201ENST00000619053 CARD11Q9BXL7 1154 aa23.31■■□□□ 1.32
AP001059.3-201ENST00000619053 AKAP12Q02952 1782 aa23.31■■□□□ 1.32
AP001059.3-201ENST00000619053 VPS72Q15906 364 aa23.28■■□□□ 1.32
AP001059.3-201ENST00000619053 BRWD3Q6RI45 1802 aa23.27■■□□□ 1.32
AP001059.3-201ENST00000619053 CABP1Q9NZU7 370 aa23.27■■□□□ 1.32
AP001059.3-201ENST00000619053 USP6P35125 1406 aa23.26■■□□□ 1.31
AP001059.3-201ENST00000619053 ATAD2Q6PL18 1390 aa23.26■■□□□ 1.31
AP001059.3-201ENST00000619053 CLSPNQ9HAW4 1339 aa23.25■■□□□ 1.31
AP001059.3-201ENST00000619053 NRKQ7Z2Y5 1582 aa23.24■■□□□ 1.31
AP001059.3-201ENST00000619053 ABTB2Q8N961 1025 aa23.24■■□□□ 1.31
AP001059.3-201ENST00000619053 USP19O94966 1318 aa23.23■■□□□ 1.31
AP001059.3-201ENST00000619053 SSH2Q76I76 1423 aa23.23■■□□□ 1.31
AP001059.3-201ENST00000619053 ZNF692Q9BU19 519 aaPredicted RBP23.22■■□□□ 1.31
AP001059.3-201ENST00000619053 PRDM11Q9NQV5 511 aa23.22■■□□□ 1.31
AP001059.3-201ENST00000619053 BTG4Q9NY30 223 aa23.22■■□□□ 1.31
AP001059.3-201ENST00000619053 ONECUT3O60422 494 aaPredicted RBP23.21■■□□□ 1.31
AP001059.3-201ENST00000619053 NUTM2GQ5VZR2 741 aa23.21■■□□□ 1.31
AP001059.3-201ENST00000619053 NLRP13Q86W25 1043 aa23.21■■□□□ 1.31
AP001059.3-201ENST00000619053 KIAA0232Q92628 1395 aa23.21■■□□□ 1.31
AP001059.3-201ENST00000619053 MON2Q7Z3U7 1717 aa23.21■■□□□ 1.31
AP001059.3-201ENST00000619053 PIK3C2AO00443 1686 aa23.2■■□□□ 1.3
AP001059.3-201ENST00000619053 CPDO75976 1380 aa23.19■■□□□ 1.3
AP001059.3-201ENST00000619053 TIMELESSQ9UNS1 1208 aa23.19■■□□□ 1.3
AP001059.3-201ENST00000619053 CPSF1Q10570 1443 aaKnown RBP23.18■■□□□ 1.3
AP001059.3-201ENST00000619053 PUS7Q96PZ0 661 aaKnown RBP23.18■■□□□ 1.3
AP001059.3-201ENST00000619053 EP400Q96L91 3159 aa23.18■■□□□ 1.3
AP001059.3-201ENST00000619053 LMO7Q8WWI1 1683 aa23.17■■□□□ 1.3
AP001059.3-201ENST00000619053 CCDC9Q9Y3X0 531 aaKnown RBP23.17■■□□□ 1.3
AP001059.3-201ENST00000619053 SLIT3O75094 1523 aa23.17■■□□□ 1.3
AP001059.3-201ENST00000619053 SLC24A1O60721 1099 aa23.16■■□□□ 1.3
AP001059.3-201ENST00000619053 ZC3H6P61129 1189 aaKnown RBP23.15■■□□□ 1.3
AP001059.3-201ENST00000619053 SPATA31A5Q5VU36 1347 aa23.14■■□□□ 1.3
AP001059.3-201ENST00000619053 SPATA31A7Q8IWB4 1347 aa23.14■■□□□ 1.3
AP001059.3-201ENST00000619053 GCP02774 474 aa23.14■■□□□ 1.29
AP001059.3-201ENST00000619053 SEPT12Q8IYM1 358 aa23.14■■□□□ 1.29
AP001059.3-201ENST00000619053 PCGF6Q9BYE7 350 aa23.14■■□□□ 1.29
AP001059.3-201ENST00000619053 TTC21BQ7Z4L5 1316 aa23.13■■□□□ 1.29
AP001059.3-201ENST00000619053 TTC21AQ8NDW8 1320 aa23.13■■□□□ 1.29
AP001059.3-201ENST00000619053 CHRNA2Q15822 529 aa23.13■■□□□ 1.29
AP001059.3-201ENST00000619053 USP54Q70EL1 1684 aa23.13■■□□□ 1.29
AP001059.3-201ENST00000619053 NLRP6P59044 892 aa23.12■■□□□ 1.29
AP001059.3-201ENST00000619053 TESK2Q96S53 571 aa23.12■■□□□ 1.29
AP001059.3-201ENST00000619053 CAMTA1Q9Y6Y1 1673 aa23.12■■□□□ 1.29
AP001059.3-201ENST00000619053 KTN1Q86UP2 1357 aaKnown RBP23.12■■□□□ 1.29
AP001059.3-201ENST00000619053 ST20-MTHFSA0A0A6YYL1 179 aa23.11■■□□□ 1.29
AP001059.3-201ENST00000619053 THSD7AQ9UPZ6 1657 aa23.11■■□□□ 1.29
AP001059.3-201ENST00000619053 CD163L1Q9NR16 1453 aa23.11■■□□□ 1.29
AP001059.3-201ENST00000619053 CCDC125Q86Z20 511 aa23.1■■□□□ 1.29
AP001059.3-201ENST00000619053 COL18A1P39060 1754 aa23.09■■□□□ 1.29
AP001059.3-201ENST00000619053 SPATA31A1Q5TZJ5 1347 aa23.08■■□□□ 1.28
AP001059.3-201ENST00000619053 NINLQ9Y2I6 1382 aa23.07■■□□□ 1.28
AP001059.3-201ENST00000619053 FAM98CQ17RN3 349 aaKnown RBP23.07■■□□□ 1.28
AP001059.3-201ENST00000619053 USP47Q96K76 1375 aa23.06■■□□□ 1.28
AP001059.3-201ENST00000619053 KRT27Q7Z3Y8 459 aa23.06■■□□□ 1.28
AP001059.3-201ENST00000619053 AATKQ6ZMQ8 1374 aa23.05■■□□□ 1.28
AP001059.3-201ENST00000619053 RGPD5Q99666 1765 aa23.05■■□□□ 1.28
AP001059.3-201ENST00000619053 EVA1CP58658 441 aa23.05■■□□□ 1.28
AP001059.3-201ENST00000619053 HDGFL2Q7Z4V5 671 aaPredicted RBP23.05■■□□□ 1.28
AP001059.3-201ENST00000619053 KCNH5Q8NCM2 988 aa23.05■■□□□ 1.28
AP001059.3-201ENST00000619053 SLC12A5Q9H2X9 1139 aa23.05■■□□□ 1.28
AP001059.3-201ENST00000619053 STRN4Q9NRL3 753 aa23.05■■□□□ 1.28
AP001059.3-201ENST00000619053 TMC1Q8TDI8 760 aa23.04■■□□□ 1.28
AP001059.3-201ENST00000619053 TERF2IPQ9NYB0 399 aa23.04■■□□□ 1.28
AP001059.3-201ENST00000619053 EDC4Q6P2E9 1401 aaKnown RBP23.04■■□□□ 1.28
AP001059.3-201ENST00000619053 COL5A2P05997 1499 aaPredicted RBP23.04■■□□□ 1.28
AP001059.3-201ENST00000619053 USP31Q70CQ4 1352 aa23.03■■□□□ 1.28
AP001059.3-201ENST00000619053 NFAT5O94916 1531 aa23.03■■□□□ 1.28
AP001059.3-201ENST00000619053 BLMP54132 1417 aaPredicted RBP23.02■■□□□ 1.28
AP001059.3-201ENST00000619053 A0A0G2JS52 829 aa23.02■■□□□ 1.28
AP001059.3-201ENST00000619053 MYT1Q01538 1121 aa23.02■■□□□ 1.28
AP001059.3-201ENST00000619053 BARGINQ6ZT62 677 aa23.01■■□□□ 1.27
AP001059.3-201ENST00000619053 ABCC6O95255 1503 aa23.01■■□□□ 1.27
AP001059.3-201ENST00000619053 A0A1W2PP64 1363 aa23.01■■□□□ 1.27
AP001059.3-201ENST00000619053 ARHGEF25Q86VW2 580 aa23■■□□□ 1.27
AP001059.3-201ENST00000619053 TMF1P82094 1093 aa22.99■■□□□ 1.27
AP001059.3-201ENST00000619053 LARP1Q6PKG0 1096 aaKnown RBP22.99■■□□□ 1.27
AP001059.3-201ENST00000619053 LTN1O94822 1766 aa22.99■■□□□ 1.27
AP001059.3-201ENST00000619053 THRAP3Q9Y2W1 955 aaKnown RBP22.98■■□□□ 1.27
AP001059.3-201ENST00000619053 PARP4Q9UKK3 1724 aaKnown RBP22.98■■□□□ 1.27
AP001059.3-201ENST00000619053 RGPD1P0DJD0 1748 aa22.97■■□□□ 1.27
AP001059.3-201ENST00000619053 WNK3Q9BYP7 1800 aa22.97■■□□□ 1.27
AP001059.3-201ENST00000619053 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms