RNA–Protein interactions for RNA: ENST00000618921.4

CBWD3-214, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-214ENST00000618921 POLA2Q14181 598 aa9.51□□□□□ -0.89
CBWD3-214ENST00000618921 ZBTB47Q9UFB7 747 aaPredicted RBP9.51□□□□□ -0.89
CBWD3-214ENST00000618921 TRPM2O94759 1503 aa9.51□□□□□ -0.89
CBWD3-214ENST00000618921 ANKRD30BQ9BXX2 1392 aa9.51□□□□□ -0.89
CBWD3-214ENST00000618921 HSPA5P11021 654 aaKnown RBP9.51□□□□□ -0.89
CBWD3-214ENST00000618921 ORAI2Q96SN7 254 aa9.51□□□□□ -0.89
CBWD3-214ENST00000618921 METP08581 1390 aa9.5□□□□□ -0.89
CBWD3-214ENST00000618921 ADGRL2O95490 1459 aa9.5□□□□□ -0.89
CBWD3-214ENST00000618921 RIOK3O14730 519 aaKnown RBP9.5□□□□□ -0.89
CBWD3-214ENST00000618921 DHX37Q8IY37 1157 aaKnown RBP9.5□□□□□ -0.89
CBWD3-214ENST00000618921 BRD2P25440 801 aaKnown RBP9.49□□□□□ -0.89
CBWD3-214ENST00000618921 SOS2Q07890 1332 aaPredicted RBP9.49□□□□□ -0.89
CBWD3-214ENST00000618921 L3MBTL2Q969R5 705 aa9.49□□□□□ -0.89
CBWD3-214ENST00000618921 NEFLP07196 543 aa9.48□□□□□ -0.89
CBWD3-214ENST00000618921 ATRNO75882 1429 aa9.48□□□□□ -0.89
CBWD3-214ENST00000618921 UNC13BO14795 1591 aa9.48□□□□□ -0.89
CBWD3-214ENST00000618921 GJD4Q96KN9 370 aaPredicted RBP9.48□□□□□ -0.89
CBWD3-214ENST00000618921 RYDENQ9NUL5 291 aaKnown RBP9.48□□□□□ -0.89
CBWD3-214ENST00000618921 C1orf167Q5SNV9 1468 aa9.48□□□□□ -0.89
CBWD3-214ENST00000618921 WASHC2AQ641Q2 1341 aa9.47□□□□□ -0.89
CBWD3-214ENST00000618921 ZNF326Q5BKZ1 582 aaKnown RBP9.47□□□□□ -0.89
CBWD3-214ENST00000618921 DEFB132Q7Z7B7 95 aa9.47□□□□□ -0.89
CBWD3-214ENST00000618921 XRN1Q8IZH2 1706 aaKnown RBP9.47□□□□□ -0.89
CBWD3-214ENST00000618921 E9PCH4 1651 aa9.47□□□□□ -0.89
CBWD3-214ENST00000618921 ADGRL3Q9HAR2 1447 aa9.46□□□□□ -0.89
CBWD3-214ENST00000618921 BCL9LQ86UU0 1499 aa9.46□□□□□ -0.9
CBWD3-214ENST00000618921 PTCH1Q13635 1447 aa9.46□□□□□ -0.9
CBWD3-214ENST00000618921 NRXN3Q9Y4C0 1643 aa9.46□□□□□ -0.9
CBWD3-214ENST00000618921 CCDC7Q96M83 1385 aa9.45□□□□□ -0.9
CBWD3-214ENST00000618921 APBB1O00213 710 aa9.44□□□□□ -0.9
CBWD3-214ENST00000618921 NUP155O75694 1391 aa9.43□□□□□ -0.9
CBWD3-214ENST00000618921 IL27Q8NEV9 243 aa9.43□□□□□ -0.9
CBWD3-214ENST00000618921 LAMC1P11047 1609 aa9.43□□□□□ -0.9
CBWD3-214ENST00000618921 XPCQ01831 940 aaPredicted RBP9.43□□□□□ -0.9
CBWD3-214ENST00000618921 GSE1Q14687 1217 aa9.43□□□□□ -0.9
CBWD3-214ENST00000618921 ESCO1Q5FWF5 840 aa9.43□□□□□ -0.9
CBWD3-214ENST00000618921 ANO8Q9HCE9 1232 aaPredicted RBP9.43□□□□□ -0.9
CBWD3-214ENST00000618921 NALCNQ8IZF0 1738 aa9.42□□□□□ -0.9
CBWD3-214ENST00000618921 FOXO3O43524 673 aa9.42□□□□□ -0.9
CBWD3-214ENST00000618921 BLMP54132 1417 aaPredicted RBP9.42□□□□□ -0.9
CBWD3-214ENST00000618921 NBPF8Q3BBV2 869 aa9.42□□□□□ -0.9
CBWD3-214ENST00000618921 SPATA31E1Q6ZUB1 1445 aa9.42□□□□□ -0.9
CBWD3-214ENST00000618921 SF3B2Q13435 895 aaKnown RBP9.41□□□□□ -0.9
CBWD3-214ENST00000618921 UNC5CLQ8IV45 518 aa9.41□□□□□ -0.9
CBWD3-214ENST00000618921 ROBO2Q9HCK4 1378 aa9.41□□□□□ -0.9
CBWD3-214ENST00000618921 PSDA5PKW4 1024 aaPredicted RBP9.41□□□□□ -0.9
CBWD3-214ENST00000618921 ZMYND10O75800 440 aa9.41□□□□□ -0.9
CBWD3-214ENST00000618921 RGS22Q8NE09 1264 aa9.41□□□□□ -0.9
CBWD3-214ENST00000618921 ZNF692Q9BU19 519 aaPredicted RBP9.41□□□□□ -0.9
CBWD3-214ENST00000618921 GPBP1L1Q9HC44 474 aaPredicted RBP9.41□□□□□ -0.9
CBWD3-214ENST00000618921 MYOM2P54296 1465 aa9.4□□□□□ -0.9
CBWD3-214ENST00000618921 NPHP3Q7Z494 1330 aa9.4□□□□□ -0.9
CBWD3-214ENST00000618921 VGFO15240 615 aaPredicted RBP9.4□□□□□ -0.9
CBWD3-214ENST00000618921 SEPT12Q8IYM1 358 aa9.4□□□□□ -0.9
CBWD3-214ENST00000618921 COL22A1Q8NFW1 1626 aaPredicted RBP9.4□□□□□ -0.91
CBWD3-214ENST00000618921 IQGAP3Q86VI3 1631 aa9.39□□□□□ -0.91
CBWD3-214ENST00000618921 HNRNPUQ00839 825 aaKnown RBP eCLIP9.39□□□□□ -0.91
CBWD3-214ENST00000618921 STK24Q9Y6E0 443 aa9.39□□□□□ -0.91
CBWD3-214ENST00000618921 RALGAPBQ86X10 1494 aa9.38□□□□□ -0.91
CBWD3-214ENST00000618921 BRWD3Q6RI45 1802 aa9.38□□□□□ -0.91
CBWD3-214ENST00000618921 ONECUT3O60422 494 aaPredicted RBP9.38□□□□□ -0.91
CBWD3-214ENST00000618921 PRKRIP1Q9H875 184 aaPredicted RBP9.38□□□□□ -0.91
CBWD3-214ENST00000618921 KIF7Q2M1P5 1343 aa9.38□□□□□ -0.91
CBWD3-214ENST00000618921 NUTM2FA1L443 756 aa9.38□□□□□ -0.91
CBWD3-214ENST00000618921 PKNOX2Q96KN3 472 aa9.38□□□□□ -0.91
CBWD3-214ENST00000618921 BCL11BQ9C0K0 894 aaPredicted RBP9.38□□□□□ -0.91
CBWD3-214ENST00000618921 MARF1Q9Y4F3 1742 aaKnown RBP9.37□□□□□ -0.91
CBWD3-214ENST00000618921 C11orf95C9JLR9 678 aaPredicted RBP9.37□□□□□ -0.91
CBWD3-214ENST00000618921 GLI3P10071 1580 aa9.37□□□□□ -0.91
CBWD3-214ENST00000618921 PXDNQ92626 1479 aa9.37□□□□□ -0.91
CBWD3-214ENST00000618921 SEMA3EO15041 775 aa9.36□□□□□ -0.91
CBWD3-214ENST00000618921 KRT27Q7Z3Y8 459 aa9.36□□□□□ -0.91
CBWD3-214ENST00000618921 LRP5O75197 1615 aa9.36□□□□□ -0.91
CBWD3-214ENST00000618921 SLIT2O94813 1529 aa9.36□□□□□ -0.91
CBWD3-214ENST00000618921 NEXMIFQ5QGS0 1516 aa9.36□□□□□ -0.91
CBWD3-214ENST00000618921 ERICH6BQ5W0A0 696 aa9.36□□□□□ -0.91
CBWD3-214ENST00000618921 ARHGEF1Q92888 912 aaKnown RBP9.36□□□□□ -0.91
CBWD3-214ENST00000618921 USP47Q96K76 1375 aa9.35□□□□□ -0.91
CBWD3-214ENST00000618921 TESPA1A2RU30 521 aaPredicted RBP9.35□□□□□ -0.91
CBWD3-214ENST00000618921 MKRN3Q13064 507 aaKnown RBP9.35□□□□□ -0.91
CBWD3-214ENST00000618921 VPS72Q15906 364 aa9.35□□□□□ -0.91
CBWD3-214ENST00000618921 ZBTB12Q9Y330 459 aaPredicted RBP9.35□□□□□ -0.91
CBWD3-214ENST00000618921 SPATA31A3Q5VYP0 1347 aa9.35□□□□□ -0.91
CBWD3-214ENST00000618921 PDE4CQ08493 712 aa9.34□□□□□ -0.91
CBWD3-214ENST00000618921 WAPLQ7Z5K2 1190 aa9.34□□□□□ -0.91
CBWD3-214ENST00000618921 KCTD17Q8N5Z5 321 aa9.34□□□□□ -0.91
CBWD3-214ENST00000618921 CABLES1Q8TDN4 633 aa9.34□□□□□ -0.91
CBWD3-214ENST00000618921 ROCK2O75116 1388 aaKnown RBP9.34□□□□□ -0.91
CBWD3-214ENST00000618921 LRPPRCP42704 1394 aaKnown RBP9.34□□□□□ -0.91
CBWD3-214ENST00000618921 SPHKAPQ2M3C7 1700 aa9.34□□□□□ -0.91
CBWD3-214ENST00000618921 BAG6P46379 1132 aa9.34□□□□□ -0.91
CBWD3-214ENST00000618921 EN1Q05925 392 aaPredicted RBP9.34□□□□□ -0.91
CBWD3-214ENST00000618921 KRT28Q7Z3Y7 464 aa9.34□□□□□ -0.91
CBWD3-214ENST00000618921 ZNF428Q96B54 188 aa9.34□□□□□ -0.91
CBWD3-214ENST00000618921 MRS2Q9HD23 443 aa9.34□□□□□ -0.91
CBWD3-214ENST00000618921 R3HDM1Q15032 1099 aaKnown RBP9.33□□□□□ -0.92
CBWD3-214ENST00000618921 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.33□□□□□ -0.92
CBWD3-214ENST00000618921 FAM83GA6ND36 823 aa9.32□□□□□ -0.92
CBWD3-214ENST00000618921 STK26Q9P289 416 aa9.32□□□□□ -0.92
CBWD3-214ENST00000618921 ZBED9Q6R2W3 1325 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms