RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 SHTN1A0MZ66 631 aa13.66□□□□□ -0.22
PCDHA4-204ENST00000618834 TEFQ10587 303 aa13.65□□□□□ -0.22
PCDHA4-204ENST00000618834 EIF2S2P20042 333 aaKnown RBP13.65□□□□□ -0.22
PCDHA4-204ENST00000618834 PRKRIP1Q9H875 184 aaPredicted RBP13.65□□□□□ -0.22
PCDHA4-204ENST00000618834 CWC22Q9HCG8 908 aaKnown RBP13.64□□□□□ -0.23
PCDHA4-204ENST00000618834 STK38Q15208 465 aa13.64□□□□□ -0.23
PCDHA4-204ENST00000618834 LRRFIP2Q9Y608 721 aaKnown RBP13.64□□□□□ -0.23
PCDHA4-204ENST00000618834 MAP9Q49MG5 647 aa13.64□□□□□ -0.23
PCDHA4-204ENST00000618834 FAM107BQ9H098 131 aa13.64□□□□□ -0.23
PCDHA4-204ENST00000618834 EID1Q9Y6B2 187 aa13.63□□□□□ -0.23
PCDHA4-204ENST00000618834 TMEM132AQ24JP5 1023 aa13.63□□□□□ -0.23
PCDHA4-204ENST00000618834 CALCOCO1Q9P1Z2 691 aa13.63□□□□□ -0.23
PCDHA4-204ENST00000618834 FKBP5Q13451 457 aaPredicted RBP13.63□□□□□ -0.23
PCDHA4-204ENST00000618834 TMCO3Q6UWJ1 677 aa13.63□□□□□ -0.23
PCDHA4-204ENST00000618834 FAM177A1Q8N128 213 aaPredicted RBP13.63□□□□□ -0.23
PCDHA4-204ENST00000618834 HIP1O00291 1037 aa13.63□□□□□ -0.23
PCDHA4-204ENST00000618834 KANK4Q5T7N3 995 aaPredicted RBP13.63□□□□□ -0.23
PCDHA4-204ENST00000618834 KRT18P05783 430 aaKnown RBP13.63□□□□□ -0.23
PCDHA4-204ENST00000618834 NECTIN2Q92692 538 aa13.63□□□□□ -0.23
PCDHA4-204ENST00000618834 GOLGA6L10A0A0M3HER8 536 aa13.63□□□□□ -0.23
PCDHA4-204ENST00000618834 NF2P35240 595 aa13.62□□□□□ -0.23
PCDHA4-204ENST00000618834 TICAM2Q86XR7 235 aa13.62□□□□□ -0.23
PCDHA4-204ENST00000618834 PAF1Q8N7H5 531 aa13.62□□□□□ -0.23
PCDHA4-204ENST00000618834 PANK1Q8TE04 598 aa13.62□□□□□ -0.23
PCDHA4-204ENST00000618834 CEP63Q96MT8 703 aa13.62□□□□□ -0.23
PCDHA4-204ENST00000618834 ST20-MTHFSA0A0A6YYL1 179 aa13.61□□□□□ -0.23
PCDHA4-204ENST00000618834 AEBP1Q8IUX7 1158 aa13.61□□□□□ -0.23
PCDHA4-204ENST00000618834 RIPK4P57078 832 aa13.61□□□□□ -0.23
PCDHA4-204ENST00000618834 KIF2AO00139 706 aaPredicted RBP13.61□□□□□ -0.23
PCDHA4-204ENST00000618834 WASHC4Q2M389 1173 aa13.61□□□□□ -0.23
PCDHA4-204ENST00000618834 CEBPZQ03701 1054 aaKnown RBP13.61□□□□□ -0.23
PCDHA4-204ENST00000618834 CCDC148Q8NFR7 591 aa13.61□□□□□ -0.23
PCDHA4-204ENST00000618834 RUNDC1Q96C34 613 aa13.61□□□□□ -0.23
PCDHA4-204ENST00000618834 CUX1P39880 1505 aa13.61□□□□□ -0.23
PCDHA4-204ENST00000618834 FYB1O15117 783 aa13.61□□□□□ -0.23
PCDHA4-204ENST00000618834 ESPNB1AK53 854 aa13.6□□□□□ -0.23
PCDHA4-204ENST00000618834 CNTLNQ9NXG0 1405 aa13.6□□□□□ -0.23
PCDHA4-204ENST00000618834 WWC2Q6AWC2 1192 aa13.6□□□□□ -0.23
PCDHA4-204ENST00000618834 SLC3A2P08195 630 aaKnown RBP13.6□□□□□ -0.23
PCDHA4-204ENST00000618834 MCM3P25205 808 aa13.6□□□□□ -0.23
PCDHA4-204ENST00000618834 KIAA1328Q86T90 577 aa13.6□□□□□ -0.23
PCDHA4-204ENST00000618834 SPATA24Q86W54 205 aa13.6□□□□□ -0.23
PCDHA4-204ENST00000618834 FSD1Q9BTV5 496 aa13.6□□□□□ -0.23
PCDHA4-204ENST00000618834 CRACR2AQ9BSW2 395 aa13.6□□□□□ -0.23
PCDHA4-204ENST00000618834 APAF1O14727 1248 aa13.6□□□□□ -0.23
PCDHA4-204ENST00000618834 ME1P48163 572 aa13.6□□□□□ -0.23
PCDHA4-204ENST00000618834 PRDM10Q9NQV6 1147 aa13.6□□□□□ -0.23
PCDHA4-204ENST00000618834 WDR33Q9C0J8 1336 aaKnown RBP13.6□□□□□ -0.23
PCDHA4-204ENST00000618834 NEK4P51957 841 aa13.59□□□□□ -0.23
PCDHA4-204ENST00000618834 WIZO95785 1651 aa13.59□□□□□ -0.23
PCDHA4-204ENST00000618834 GPATCH11Q8N954 259 aa13.59□□□□□ -0.23
PCDHA4-204ENST00000618834 MAP2K1Q02750 393 aaPredicted RBP13.59□□□□□ -0.23
PCDHA4-204ENST00000618834 MICALCLQ6ZW33 695 aa13.58□□□□□ -0.23
PCDHA4-204ENST00000618834 JAKMIP3Q5VZ66 844 aa13.58□□□□□ -0.24
PCDHA4-204ENST00000618834 CFAP45Q9UL16 551 aa13.58□□□□□ -0.24
PCDHA4-204ENST00000618834 GBP3Q9H0R5 595 aa13.58□□□□□ -0.24
PCDHA4-204ENST00000618834 KDM4AO75164 1064 aa13.58□□□□□ -0.24
PCDHA4-204ENST00000618834 UBTFL1P0CB47 393 aaPredicted RBP13.58□□□□□ -0.24
PCDHA4-204ENST00000618834 NUTM2DQ5VT03 806 aaPredicted RBP13.58□□□□□ -0.24
PCDHA4-204ENST00000618834 ANKRD1Q15327 319 aa13.58□□□□□ -0.24
PCDHA4-204ENST00000618834 CGNQ9P2M7 1197 aaKnown RBP13.58□□□□□ -0.24
PCDHA4-204ENST00000618834 UBXN4Q92575 508 aa13.58□□□□□ -0.24
PCDHA4-204ENST00000618834 RSPH4AQ5TD94 716 aa13.57□□□□□ -0.24
PCDHA4-204ENST00000618834 SAMD1Q6SPF0 538 aaPredicted RBP13.57□□□□□ -0.24
PCDHA4-204ENST00000618834 CEP57L1Q8IYX8 460 aa13.57□□□□□ -0.24
PCDHA4-204ENST00000618834 EPB41L2O43491 1005 aaKnown RBP13.57□□□□□ -0.24
PCDHA4-204ENST00000618834 DIAPH1O60610 1272 aaKnown RBP13.57□□□□□ -0.24
PCDHA4-204ENST00000618834 MIA2Q96PC5 1412 aa13.56□□□□□ -0.24
PCDHA4-204ENST00000618834 KRT85P78386 507 aa13.56□□□□□ -0.24
PCDHA4-204ENST00000618834 NEUROD6Q96NK8 337 aa13.56□□□□□ -0.24
PCDHA4-204ENST00000618834 SEPT11Q9NVA2 429 aaKnown RBP13.56□□□□□ -0.24
PCDHA4-204ENST00000618834 TRAK1Q9UPV9 953 aa13.56□□□□□ -0.24
PCDHA4-204ENST00000618834 STAMBPO95630 424 aa13.56□□□□□ -0.24
PCDHA4-204ENST00000618834 GNAI1P63096 354 aa13.56□□□□□ -0.24
PCDHA4-204ENST00000618834 KIF3BO15066 747 aa13.56□□□□□ -0.24
PCDHA4-204ENST00000618834 CASQ1P31415 396 aa13.56□□□□□ -0.24
PCDHA4-204ENST00000618834 MPNDQ8N594 471 aa13.56□□□□□ -0.24
PCDHA4-204ENST00000618834 IKQ13123 557 aaPredicted RBP13.55□□□□□ -0.24
PCDHA4-204ENST00000618834 TAF4BQ92750 862 aa13.55□□□□□ -0.24
PCDHA4-204ENST00000618834 TANGO6Q9C0B7 1094 aa13.55□□□□□ -0.24
PCDHA4-204ENST00000618834 TBC1D2BQ9UPU7 963 aa13.55□□□□□ -0.24
PCDHA4-204ENST00000618834 DHX57Q6P158 1386 aaKnown RBP13.55□□□□□ -0.24
PCDHA4-204ENST00000618834 ARHGAP29Q52LW3 1261 aa13.55□□□□□ -0.24
PCDHA4-204ENST00000618834 ZSCAN30Q86W11 494 aa13.55□□□□□ -0.24
PCDHA4-204ENST00000618834 ATP2B1P20020 1258 aa13.55□□□□□ -0.24
PCDHA4-204ENST00000618834 K7ELQ4 463 aaPredicted RBP13.55□□□□□ -0.24
PCDHA4-204ENST00000618834 LUZP1Q86V48 1076 aa13.55□□□□□ -0.24
PCDHA4-204ENST00000618834 TSPYL4Q9UJ04 414 aa13.55□□□□□ -0.24
PCDHA4-204ENST00000618834 DESP17661 470 aa13.54□□□□□ -0.24
PCDHA4-204ENST00000618834 EVA1CP58658 441 aa13.54□□□□□ -0.24
PCDHA4-204ENST00000618834 PDCL3Q9H2J4 239 aa13.54□□□□□ -0.24
PCDHA4-204ENST00000618834 CYP46A1Q9Y6A2 500 aa13.54□□□□□ -0.24
PCDHA4-204ENST00000618834 CBX1P83916 185 aa13.54□□□□□ -0.24
PCDHA4-204ENST00000618834 ZNF397Q8NF99 534 aaPredicted RBP13.54□□□□□ -0.24
PCDHA4-204ENST00000618834 WASHC2CQ9Y4E1 1318 aa13.54□□□□□ -0.24
PCDHA4-204ENST00000618834 BRD4O60885 1362 aaPredicted RBP13.54□□□□□ -0.24
PCDHA4-204ENST00000618834 RNF187Q5TA31 235 aaPredicted RBP13.54□□□□□ -0.24
PCDHA4-204ENST00000618834 SMARCA2P51531 1590 aa13.53□□□□□ -0.24
PCDHA4-204ENST00000618834 ERC1Q8IUD2 1116 aa13.53□□□□□ -0.24
PCDHA4-204ENST00000618834 IPO4Q8TEX9 1081 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms