RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 RALGAPBQ86X10 1494 aa13.84□□□□□ -0.19
TARDBP-218ENST00000617172 SEPT12Q8IYM1 358 aa13.83□□□□□ -0.2
TARDBP-218ENST00000617172 CABP2Q9NPB3 220 aa13.83□□□□□ -0.2
TARDBP-218ENST00000617172 PRDM11Q9NQV5 511 aa13.83□□□□□ -0.2
TARDBP-218ENST00000617172 EVC2Q86UK5 1308 aa13.83□□□□□ -0.2
TARDBP-218ENST00000617172 BRD4O60885 1362 aaPredicted RBP13.83□□□□□ -0.2
TARDBP-218ENST00000617172 ROCK2O75116 1388 aaKnown RBP13.83□□□□□ -0.2
TARDBP-218ENST00000617172 TRIM26Q12899 539 aaPredicted RBP13.82□□□□□ -0.2
TARDBP-218ENST00000617172 ABTB2Q8N961 1025 aa13.82□□□□□ -0.2
TARDBP-218ENST00000617172 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.81□□□□□ -0.2
TARDBP-218ENST00000617172 TRPM3Q9HCF6 1732 aaPredicted RBP13.81□□□□□ -0.2
TARDBP-218ENST00000617172 NLRP13Q86W25 1043 aa13.81□□□□□ -0.2
TARDBP-218ENST00000617172 CABP1Q9NZU7 370 aa13.8□□□□□ -0.2
TARDBP-218ENST00000617172 ITSN1Q15811 1721 aa13.8□□□□□ -0.2
TARDBP-218ENST00000617172 PPIP5K1Q6PFW1 1433 aa13.8□□□□□ -0.2
TARDBP-218ENST00000617172 ALS2Q96Q42 1657 aa13.79□□□□□ -0.2
TARDBP-218ENST00000617172 NUTM2GQ5VZR2 741 aa13.79□□□□□ -0.2
TARDBP-218ENST00000617172 KRT27Q7Z3Y8 459 aa13.79□□□□□ -0.2
TARDBP-218ENST00000617172 ZNF692Q9BU19 519 aaPredicted RBP13.79□□□□□ -0.2
TARDBP-218ENST00000617172 NWD2Q9ULI1 1742 aa13.78□□□□□ -0.2
TARDBP-218ENST00000617172 ZC3H6P61129 1189 aaKnown RBP13.78□□□□□ -0.2
TARDBP-218ENST00000617172 KIAA0232Q92628 1395 aa13.78□□□□□ -0.2
TARDBP-218ENST00000617172 GLI3P10071 1580 aa13.78□□□□□ -0.2
TARDBP-218ENST00000617172 A0A0G2JS52 829 aa13.77□□□□□ -0.21
TARDBP-218ENST00000617172 MYT1Q01538 1121 aa13.77□□□□□ -0.21
TARDBP-218ENST00000617172 SF3B2Q13435 895 aaKnown RBP13.77□□□□□ -0.21
TARDBP-218ENST00000617172 FAM98CQ17RN3 349 aaKnown RBP13.77□□□□□ -0.21
TARDBP-218ENST00000617172 SPATA31A5Q5VU36 1347 aa13.77□□□□□ -0.21
TARDBP-218ENST00000617172 SPATA31A7Q8IWB4 1347 aa13.77□□□□□ -0.21
TARDBP-218ENST00000617172 TONSLQ96HA7 1378 aa13.77□□□□□ -0.21
TARDBP-218ENST00000617172 GCP02774 474 aa13.76□□□□□ -0.21
TARDBP-218ENST00000617172 EVA1CP58658 441 aa13.76□□□□□ -0.21
TARDBP-218ENST00000617172 CARD11Q9BXL7 1154 aa13.76□□□□□ -0.21
TARDBP-218ENST00000617172 EP400Q96L91 3159 aa13.76□□□□□ -0.21
TARDBP-218ENST00000617172 COL14A1Q05707 1796 aaKnown RBP13.76□□□□□ -0.21
TARDBP-218ENST00000617172 BLMP54132 1417 aaPredicted RBP13.75□□□□□ -0.21
TARDBP-218ENST00000617172 USP19O94966 1318 aa13.75□□□□□ -0.21
TARDBP-218ENST00000617172 CHRNA2Q15822 529 aa13.75□□□□□ -0.21
TARDBP-218ENST00000617172 ZRANB1Q9UGI0 708 aa13.75□□□□□ -0.21
TARDBP-218ENST00000617172 ABCA3Q99758 1704 aa13.75□□□□□ -0.21
TARDBP-218ENST00000617172 CPDO75976 1380 aa13.74□□□□□ -0.21
TARDBP-218ENST00000617172 NLRP6P59044 892 aa13.74□□□□□ -0.21
TARDBP-218ENST00000617172 PLCH1Q4KWH8 1693 aa13.74□□□□□ -0.21
TARDBP-218ENST00000617172 TRPM1Q7Z4N2 1603 aa13.74□□□□□ -0.21
TARDBP-218ENST00000617172 TOPAZ1Q8N9V7 1692 aa13.73□□□□□ -0.21
TARDBP-218ENST00000617172 SPATA31A1Q5TZJ5 1347 aa13.73□□□□□ -0.21
TARDBP-218ENST00000617172 SLC24A1O60721 1099 aa13.73□□□□□ -0.21
TARDBP-218ENST00000617172 STRN4Q9NRL3 753 aa13.73□□□□□ -0.21
TARDBP-218ENST00000617172 USP6P35125 1406 aa13.73□□□□□ -0.21
TARDBP-218ENST00000617172 SBNO2Q9Y2G9 1366 aa13.72□□□□□ -0.21
TARDBP-218ENST00000617172 BARGINQ6ZT62 677 aa13.71□□□□□ -0.21
TARDBP-218ENST00000617172 QRICH2Q9H0J4 1663 aa13.71□□□□□ -0.21
TARDBP-218ENST00000617172 TTC21AQ8NDW8 1320 aa13.7□□□□□ -0.22
TARDBP-218ENST00000617172 PUS7Q96PZ0 661 aaKnown RBP13.7□□□□□ -0.22
TARDBP-218ENST00000617172 THRAP3Q9Y2W1 955 aaKnown RBP13.7□□□□□ -0.22
TARDBP-218ENST00000617172 SSH2Q76I76 1423 aa13.7□□□□□ -0.22
TARDBP-218ENST00000617172 TTC21BQ7Z4L5 1316 aa13.69□□□□□ -0.22
TARDBP-218ENST00000617172 BAG6P46379 1132 aa13.69□□□□□ -0.22
TARDBP-218ENST00000617172 TCP11L2Q8N4U5 519 aa13.69□□□□□ -0.22
TARDBP-218ENST00000617172 KCNH5Q8NCM2 988 aa13.69□□□□□ -0.22
TARDBP-218ENST00000617172 NRAPQ86VF7 1730 aa13.69□□□□□ -0.22
TARDBP-218ENST00000617172 CRYBG1Q9Y4K1 1723 aa13.69□□□□□ -0.22
TARDBP-218ENST00000617172 LARP1Q6PKG0 1096 aaKnown RBP13.68□□□□□ -0.22
TARDBP-218ENST00000617172 FAM196AQ6ZSG2 479 aa13.68□□□□□ -0.22
TARDBP-218ENST00000617172 USP35Q9P2H5 1018 aa13.68□□□□□ -0.22
TARDBP-218ENST00000617172 AATKQ6ZMQ8 1374 aa13.68□□□□□ -0.22
TARDBP-218ENST00000617172 CPSF1Q10570 1443 aaKnown RBP13.67□□□□□ -0.22
TARDBP-218ENST00000617172 PDE3BQ13370 1112 aa13.67□□□□□ -0.22
TARDBP-218ENST00000617172 DEFB132Q7Z7B7 95 aa13.67□□□□□ -0.22
TARDBP-218ENST00000617172 KTN1Q86UP2 1357 aaKnown RBP13.67□□□□□ -0.22
TARDBP-218ENST00000617172 PHRF1Q9P1Y6 1649 aaKnown RBP13.66□□□□□ -0.22
TARDBP-218ENST00000617172 C11orf95C9JLR9 678 aaPredicted RBP13.66□□□□□ -0.22
TARDBP-218ENST00000617172 HDGFL2Q7Z4V5 671 aaPredicted RBP13.66□□□□□ -0.22
TARDBP-218ENST00000617172 CAMTA1Q9Y6Y1 1673 aa13.66□□□□□ -0.22
TARDBP-218ENST00000617172 ZBTB7CA1YPR0 619 aa13.65□□□□□ -0.22
TARDBP-218ENST00000617172 ARHGEF25Q86VW2 580 aa13.65□□□□□ -0.22
TARDBP-218ENST00000617172 TMC1Q8TDI8 760 aa13.65□□□□□ -0.22
TARDBP-218ENST00000617172 TERF2IPQ9NYB0 399 aa13.65□□□□□ -0.22
TARDBP-218ENST00000617172 NRKQ7Z2Y5 1582 aa13.65□□□□□ -0.22
TARDBP-218ENST00000617172 BRWD3Q6RI45 1802 aa13.64□□□□□ -0.23
TARDBP-218ENST00000617172 FAM182BQ5T319 152 aa13.64□□□□□ -0.23
TARDBP-218ENST00000617172 TIMELESSQ9UNS1 1208 aa13.64□□□□□ -0.23
TARDBP-218ENST00000617172 SRCAPQ6ZRS2 3230 aa13.63□□□□□ -0.23
TARDBP-218ENST00000617172 CRB1P82279 1406 aa13.63□□□□□ -0.23
TARDBP-218ENST00000617172 COL5A2P05997 1499 aaPredicted RBP13.62□□□□□ -0.23
TARDBP-218ENST00000617172 ST20-MTHFSA0A0A6YYL1 179 aa13.62□□□□□ -0.23
TARDBP-218ENST00000617172 TOM1L2Q6ZVM7 507 aa13.62□□□□□ -0.23
TARDBP-218ENST00000617172 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.62□□□□□ -0.23
TARDBP-218ENST00000617172 CDCA7Q9BWT1 371 aaPredicted RBP13.62□□□□□ -0.23
TARDBP-218ENST00000617172 SLC12A5Q9H2X9 1139 aa13.62□□□□□ -0.23
TARDBP-218ENST00000617172 SLIT3O75094 1523 aa13.62□□□□□ -0.23
TARDBP-218ENST00000617172 THSD7AQ9UPZ6 1657 aa13.62□□□□□ -0.23
TARDBP-218ENST00000617172 TRIM37O94972 964 aa13.61□□□□□ -0.23
TARDBP-218ENST00000617172 TESK2Q96S53 571 aa13.61□□□□□ -0.23
TARDBP-218ENST00000617172 AXIN2Q9Y2T1 843 aa13.61□□□□□ -0.23
TARDBP-218ENST00000617172 WDR17Q8IZU2 1322 aa13.61□□□□□ -0.23
TARDBP-218ENST00000617172 CLSPNQ9HAW4 1339 aa13.61□□□□□ -0.23
TARDBP-218ENST00000617172 USP31Q70CQ4 1352 aa13.6□□□□□ -0.23
TARDBP-218ENST00000617172 NINLQ9Y2I6 1382 aa13.6□□□□□ -0.23
TARDBP-218ENST00000617172 LMO7Q8WWI1 1683 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms