RNA–Protein interactions for RNA: ENST00000617022.4

DDB2-212, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 2,181 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-212ENST00000617022 FKBP8Q14318 412 aa21.43■■□□□ 1.02
DDB2-212ENST00000617022 USP6P35125 1406 aa21.43■■□□□ 1.02
DDB2-212ENST00000617022 NCOA3Q9Y6Q9 1424 aa21.43■■□□□ 1.02
DDB2-212ENST00000617022 POLR3AO14802 1390 aaPredicted RBP21.43■■□□□ 1.02
DDB2-212ENST00000617022 LRRC7Q96NW7 1537 aa21.42■■□□□ 1.02
DDB2-212ENST00000617022 NRKQ7Z2Y5 1582 aa21.42■■□□□ 1.02
DDB2-212ENST00000617022 XIRP1Q702N8 1843 aaKnown RBP21.41■■□□□ 1.02
DDB2-212ENST00000617022 ESCO1Q5FWF5 840 aa21.41■■□□□ 1.02
DDB2-212ENST00000617022 NME9Q86XW9 330 aa21.41■■□□□ 1.02
DDB2-212ENST00000617022 ANKRD26Q9UPS8 1709 aa21.41■■□□□ 1.02
DDB2-212ENST00000617022 PHF8Q9UPP1 1060 aa21.41■■□□□ 1.02
DDB2-212ENST00000617022 ATF3P18847 181 aa21.4■■□□□ 1.02
DDB2-212ENST00000617022 PNISRQ8TF01 805 aaKnown RBP21.4■■□□□ 1.02
DDB2-212ENST00000617022 TTC21BQ7Z4L5 1316 aa21.4■■□□□ 1.02
DDB2-212ENST00000617022 ORAI2Q96SN7 254 aa21.39■■□□□ 1.01
DDB2-212ENST00000617022 ZRANB1Q9UGI0 708 aa21.39■■□□□ 1.01
DDB2-212ENST00000617022 PRKCSHP14314 528 aaPredicted RBP21.38■■□□□ 1.01
DDB2-212ENST00000617022 MSH6P52701 1360 aa21.38■■□□□ 1.01
DDB2-212ENST00000617022 DCCP43146 1447 aa21.38■■□□□ 1.01
DDB2-212ENST00000617022 C1orf167Q5SNV9 1468 aa21.37■■□□□ 1.01
DDB2-212ENST00000617022 SSH2Q76I76 1423 aa21.37■■□□□ 1.01
DDB2-212ENST00000617022 MST1RQ04912 1400 aa21.36■■□□□ 1.01
DDB2-212ENST00000617022 CADPS2Q86UW7 1296 aa21.34■■□□□ 1.01
DDB2-212ENST00000617022 NEFLP07196 543 aa21.34■■□□□ 1.01
DDB2-212ENST00000617022 COG3Q96JB2 828 aa21.33■■□□□ 1.01
DDB2-212ENST00000617022 FANCIQ9NVI1 1328 aa21.33■■□□□ 1
DDB2-212ENST00000617022 MSH5O43196 834 aa21.32■■□□□ 1
DDB2-212ENST00000617022 MTHFSP49914 203 aa21.32■■□□□ 1
DDB2-212ENST00000617022 TTC21AQ8NDW8 1320 aa21.32■■□□□ 1
DDB2-212ENST00000617022 FBLN1P23142 703 aa21.31■■□□□ 1
DDB2-212ENST00000617022 FOXO3O43524 673 aa21.31■■□□□ 1
DDB2-212ENST00000617022 PSME1Q06323 249 aa21.3■■□□□ 1
DDB2-212ENST00000617022 PAK3O75914 559 aaPredicted RBP21.3■■□□□ 1
DDB2-212ENST00000617022 HNRNPUQ00839 825 aaKnown RBP eCLIP21.3■■□□□ 1
DDB2-212ENST00000617022 OVOS2A0A0J9YW53 1432 aa21.29■■□□□ 1
DDB2-212ENST00000617022 OVOS2Q6IE36 1432 aa21.29■■□□□ 1
DDB2-212ENST00000617022 XPCQ01831 940 aaPredicted RBP21.29■■□□□ 1
DDB2-212ENST00000617022 PIK3C2AO00443 1686 aa21.28■■□□□ 1
DDB2-212ENST00000617022 KIF1AQ12756 1690 aa21.28■■□□□ 1
DDB2-212ENST00000617022 AEBP2Q6ZN18 517 aaPredicted RBP21.28■■□□□ 1
DDB2-212ENST00000617022 NUTM2GQ5VZR2 741 aa21.26■□□□□ 0.99
DDB2-212ENST00000617022 WDR43Q15061 677 aaKnown RBP eCLIP21.25■□□□□ 0.99
DDB2-212ENST00000617022 ABTB2Q8N961 1025 aa21.24■□□□□ 0.99
DDB2-212ENST00000617022 SENP3-EIF4A1A0A087X0R7 540 aa21.24■□□□□ 0.99
DDB2-212ENST00000617022 NLRP6P59044 892 aa21.24■□□□□ 0.99
DDB2-212ENST00000617022 DDX17Q92841 729 aaKnown RBP21.24■□□□□ 0.99
DDB2-212ENST00000617022 CFAP53Q96M91 514 aa21.24■□□□□ 0.99
DDB2-212ENST00000617022 POLKQ9UBT6 870 aa21.24■□□□□ 0.99
DDB2-212ENST00000617022 ADAMTS8Q9UP79 889 aa21.24■□□□□ 0.99
DDB2-212ENST00000617022 LTBP4Q8N2S1 1624 aa21.24■□□□□ 0.99
DDB2-212ENST00000617022 SOX12O15370 315 aa21.23■□□□□ 0.99
DDB2-212ENST00000617022 USP31Q70CQ4 1352 aa21.23■□□□□ 0.99
DDB2-212ENST00000617022 PPM1GO15355 546 aaPredicted RBP21.23■□□□□ 0.99
DDB2-212ENST00000617022 MAP2P11137 1827 aaKnown RBP21.23■□□□□ 0.99
DDB2-212ENST00000617022 RRS1Q15050 365 aaKnown RBP21.23■□□□□ 0.99
DDB2-212ENST00000617022 AATKQ6ZMQ8 1374 aa21.23■□□□□ 0.99
DDB2-212ENST00000617022 EMILIN1Q9Y6C2 1016 aa21.23■□□□□ 0.99
DDB2-212ENST00000617022 KRT28Q7Z3Y7 464 aa21.22■□□□□ 0.99
DDB2-212ENST00000617022 SLAIN2Q9P270 581 aa21.21■□□□□ 0.99
DDB2-212ENST00000617022 SHPRHQ149N8 1683 aa21.21■□□□□ 0.99
DDB2-212ENST00000617022 BRINP3Q76B58 766 aa21.2■□□□□ 0.98
DDB2-212ENST00000617022 MARF1Q9Y4F3 1742 aaKnown RBP21.2■□□□□ 0.98
DDB2-212ENST00000617022 TRPM3Q9HCF6 1732 aaPredicted RBP21.19■□□□□ 0.98
DDB2-212ENST00000617022 COL3A1P02461 1466 aaPredicted RBP21.19■□□□□ 0.98
DDB2-212ENST00000617022 SMG6Q86US8 1419 aaKnown RBP21.18■□□□□ 0.98
DDB2-212ENST00000617022 BLMP54132 1417 aaPredicted RBP21.17■□□□□ 0.98
DDB2-212ENST00000617022 LMOD2Q6P5Q4 547 aa21.17■□□□□ 0.98
DDB2-212ENST00000617022 ERICH6Q7L0X2 663 aa21.17■□□□□ 0.98
DDB2-212ENST00000617022 USP54Q70EL1 1684 aa21.17■□□□□ 0.98
DDB2-212ENST00000617022 PNPLA6Q8IY17 1366 aa21.17■□□□□ 0.98
DDB2-212ENST00000617022 NPHP3Q7Z494 1330 aa21.17■□□□□ 0.98
DDB2-212ENST00000617022 CDK12Q9NYV4 1490 aaPredicted RBP21.15■□□□□ 0.98
DDB2-212ENST00000617022 INSRP06213 1382 aa21.15■□□□□ 0.98
DDB2-212ENST00000617022 PLEKHG5O94827 1062 aa21.14■□□□□ 0.98
DDB2-212ENST00000617022 CCDC146Q8IYE0 955 aa21.14■□□□□ 0.97
DDB2-212ENST00000617022 DIAPH1O60610 1272 aaKnown RBP21.13■□□□□ 0.97
DDB2-212ENST00000617022 ZBED9Q6R2W3 1325 aa21.13■□□□□ 0.97
DDB2-212ENST00000617022 PXDNQ92626 1479 aa21.13■□□□□ 0.97
DDB2-212ENST00000617022 U2SURPO15042 1029 aaKnown RBP21.13■□□□□ 0.97
DDB2-212ENST00000617022 MAP3K19Q56UN5 1328 aa21.13■□□□□ 0.97
DDB2-212ENST00000617022 PEAK1Q9H792 1746 aa21.12■□□□□ 0.97
DDB2-212ENST00000617022 U2AF1L5P0DN76 240 aaPredicted RBP21.12■□□□□ 0.97
DDB2-212ENST00000617022 U2AF1Q01081 240 aaKnown RBP eCLIP21.12■□□□□ 0.973e-6■■■■□ 20.8
DDB2-212ENST00000617022 ALS2Q96Q42 1657 aa21.12■□□□□ 0.97
DDB2-212ENST00000617022 NUDCQ9Y266 331 aa21.11■□□□□ 0.97
DDB2-212ENST00000617022 SALL2Q9Y467 1007 aaPredicted RBP21.11■□□□□ 0.97
DDB2-212ENST00000617022 SBNO1A3KN83 1393 aa21.1■□□□□ 0.97
DDB2-212ENST00000617022 TNS3Q68CZ2 1445 aa21.08■□□□□ 0.97
DDB2-212ENST00000617022 HSP90AB2PQ58FF8 381 aa21.07■□□□□ 0.96
DDB2-212ENST00000617022 NFAT5O94916 1531 aa21.07■□□□□ 0.96
DDB2-212ENST00000617022 IL13P35225 146 aa21.07■□□□□ 0.96
DDB2-212ENST00000617022 AMPHP49418 695 aa21.07■□□□□ 0.96
DDB2-212ENST00000617022 SPATA31A3Q5VYP0 1347 aa21.06■□□□□ 0.96
DDB2-212ENST00000617022 KCNH5Q8NCM2 988 aa21.06■□□□□ 0.96
DDB2-212ENST00000617022 SLIT3O75094 1523 aa21.06■□□□□ 0.96
DDB2-212ENST00000617022 FLT4P35916 1363 aa21.06■□□□□ 0.96
DDB2-212ENST00000617022 USP19O94966 1318 aa21.06■□□□□ 0.96
DDB2-212ENST00000617022 SOS2Q07890 1332 aaPredicted RBP21.06■□□□□ 0.96
DDB2-212ENST00000617022 GCP02774 474 aa21.06■□□□□ 0.96
DDB2-212ENST00000617022 NHSL1Q5SYE7 1610 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 183.1 ms