RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 RBM6P78332 1123 aaKnown RBP31.43■■■□□ 2.62
CBWD3-212ENST00000616550 CABP1Q9NZU7 370 aa31.4■■■□□ 2.62
CBWD3-212ENST00000616550 ABCA3Q99758 1704 aa31.39■■■□□ 2.62
CBWD3-212ENST00000616550 TIMELESSQ9UNS1 1208 aa31.39■■■□□ 2.62
CBWD3-212ENST00000616550 SBNO2Q9Y2G9 1366 aa31.37■■■□□ 2.61
CBWD3-212ENST00000616550 BCL9LQ86UU0 1499 aa31.37■■■□□ 2.61
CBWD3-212ENST00000616550 CDK12Q9NYV4 1490 aaPredicted RBP31.37■■■□□ 2.61
CBWD3-212ENST00000616550 UNC5CLQ8IV45 518 aa31.35■■■□□ 2.61
CBWD3-212ENST00000616550 ATRNO75882 1429 aa31.34■■■□□ 2.61
CBWD3-212ENST00000616550 CCER1Q8TC90 406 aaPredicted RBP31.34■■■□□ 2.61
CBWD3-212ENST00000616550 SLIT2O94813 1529 aa31.34■■■□□ 2.61
CBWD3-212ENST00000616550 ABTB2Q8N961 1025 aa31.33■■■□□ 2.61
CBWD3-212ENST00000616550 ATAD2Q6PL18 1390 aa31.32■■■□□ 2.6
CBWD3-212ENST00000616550 NUTM2GQ5VZR2 741 aa31.32■■■□□ 2.6
CBWD3-212ENST00000616550 FAM83GA6ND36 823 aa31.31■■■□□ 2.6
CBWD3-212ENST00000616550 BRD4O60885 1362 aaPredicted RBP31.3■■■□□ 2.6
CBWD3-212ENST00000616550 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.3■■■□□ 2.6
CBWD3-212ENST00000616550 GJD4Q96KN9 370 aaPredicted RBP31.28■■■□□ 2.6
CBWD3-212ENST00000616550 CRYBG1Q9Y4K1 1723 aa31.27■■■□□ 2.6
CBWD3-212ENST00000616550 ZNF692Q9BU19 519 aaPredicted RBP31.27■■■□□ 2.6
CBWD3-212ENST00000616550 PLCH1Q4KWH8 1693 aa31.26■■■□□ 2.6
CBWD3-212ENST00000616550 RGS12O14924 1447 aa31.26■■■□□ 2.6
CBWD3-212ENST00000616550 USP6P35125 1406 aa31.26■■■□□ 2.6
CBWD3-212ENST00000616550 ST20-MTHFSA0A0A6YYL1 179 aa31.26■■■□□ 2.59
CBWD3-212ENST00000616550 NWD2Q9ULI1 1742 aa31.26■■■□□ 2.59
CBWD3-212ENST00000616550 NLRP13Q86W25 1043 aa31.25■■■□□ 2.59
CBWD3-212ENST00000616550 SLC24A1O60721 1099 aa31.24■■■□□ 2.59
CBWD3-212ENST00000616550 PRDM11Q9NQV5 511 aa31.24■■■□□ 2.59
CBWD3-212ENST00000616550 BTG4Q9NY30 223 aa31.22■■■□□ 2.59
CBWD3-212ENST00000616550 COL14A1Q05707 1796 aaKnown RBP31.22■■■□□ 2.59
CBWD3-212ENST00000616550 PHRF1Q9P1Y6 1649 aaKnown RBP31.21■■■□□ 2.59
CBWD3-212ENST00000616550 VPS72Q15906 364 aa31.21■■■□□ 2.59
CBWD3-212ENST00000616550 PUS7Q96PZ0 661 aaKnown RBP31.2■■■□□ 2.59
CBWD3-212ENST00000616550 CCDC9Q9Y3X0 531 aaKnown RBP31.2■■■□□ 2.59
CBWD3-212ENST00000616550 ZC3H6P61129 1189 aaKnown RBP31.19■■■□□ 2.58
CBWD3-212ENST00000616550 TMC1Q8TDI8 760 aa31.19■■■□□ 2.58
CBWD3-212ENST00000616550 TESK2Q96S53 571 aa31.19■■■□□ 2.58
CBWD3-212ENST00000616550 AKAP12Q02952 1782 aa31.19■■■□□ 2.58
CBWD3-212ENST00000616550 NLRP6P59044 892 aa31.18■■■□□ 2.58
CBWD3-212ENST00000616550 KIAA0232Q92628 1395 aa31.17■■■□□ 2.58
CBWD3-212ENST00000616550 USP47Q96K76 1375 aa31.17■■■□□ 2.58
CBWD3-212ENST00000616550 USP19O94966 1318 aa31.17■■■□□ 2.58
CBWD3-212ENST00000616550 CPSF1Q10570 1443 aaKnown RBP31.16■■■□□ 2.58
CBWD3-212ENST00000616550 SSH2Q76I76 1423 aa31.16■■■□□ 2.58
CBWD3-212ENST00000616550 KTN1Q86UP2 1357 aaKnown RBP31.16■■■□□ 2.58
CBWD3-212ENST00000616550 TTC21BQ7Z4L5 1316 aa31.15■■■□□ 2.58
CBWD3-212ENST00000616550 GCP02774 474 aa31.14■■■□□ 2.58
CBWD3-212ENST00000616550 CHRNA2Q15822 529 aa31.14■■■□□ 2.58
CBWD3-212ENST00000616550 GLI3P10071 1580 aa31.13■■■□□ 2.57
CBWD3-212ENST00000616550 SLC12A5Q9H2X9 1139 aa31.13■■■□□ 2.57
CBWD3-212ENST00000616550 TTC21AQ8NDW8 1320 aa31.13■■■□□ 2.57
CBWD3-212ENST00000616550 NRAPQ86VF7 1730 aa31.12■■■□□ 2.57
CBWD3-212ENST00000616550 HDGFL2Q7Z4V5 671 aaPredicted RBP31.12■■■□□ 2.57
CBWD3-212ENST00000616550 UPF1Q92900 1129 aaKnown RBP eCLIP31.12■■■□□ 2.57
CBWD3-212ENST00000616550 NRKQ7Z2Y5 1582 aa31.11■■■□□ 2.57
CBWD3-212ENST00000616550 TMF1P82094 1093 aa31.1■■■□□ 2.57
CBWD3-212ENST00000616550 CPDO75976 1380 aa31.09■■■□□ 2.57
CBWD3-212ENST00000616550 TERF2IPQ9NYB0 399 aa31.09■■■□□ 2.57
CBWD3-212ENST00000616550 PIK3C2AO00443 1686 aa31.09■■■□□ 2.57
CBWD3-212ENST00000616550 MON2Q7Z3U7 1717 aa31.07■■■□□ 2.56
CBWD3-212ENST00000616550 EVA1CP58658 441 aa31.06■■■□□ 2.56
CBWD3-212ENST00000616550 CD163L1Q9NR16 1453 aa31.06■■■□□ 2.56
CBWD3-212ENST00000616550 NINLQ9Y2I6 1382 aa31.05■■■□□ 2.56
CBWD3-212ENST00000616550 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.05■■■□□ 2.56
CBWD3-212ENST00000616550 STRN4Q9NRL3 753 aa31.05■■■□□ 2.56
CBWD3-212ENST00000616550 ONECUT3O60422 494 aaPredicted RBP31.04■■■□□ 2.56
CBWD3-212ENST00000616550 SEPT12Q8IYM1 358 aa31.04■■■□□ 2.56
CBWD3-212ENST00000616550 SLIT3O75094 1523 aa31.03■■■□□ 2.56
CBWD3-212ENST00000616550 SPATA31A5Q5VU36 1347 aa31.02■■■□□ 2.56
CBWD3-212ENST00000616550 SPATA31A7Q8IWB4 1347 aa31.02■■■□□ 2.56
CBWD3-212ENST00000616550 ZBTB7CA1YPR0 619 aa31.02■■■□□ 2.56
CBWD3-212ENST00000616550 CDCA8Q53HL2 280 aa31.02■■■□□ 2.56
CBWD3-212ENST00000616550 KCNH5Q8NCM2 988 aa31.02■■■□□ 2.56
CBWD3-212ENST00000616550 A0A0G2JS52 829 aa31.01■■■□□ 2.55
CBWD3-212ENST00000616550 MYT1Q01538 1121 aa31.01■■■□□ 2.55
CBWD3-212ENST00000616550 FAM98CQ17RN3 349 aaKnown RBP31■■■□□ 2.55
CBWD3-212ENST00000616550 A0A1W2PP64 1363 aa31■■■□□ 2.55
CBWD3-212ENST00000616550 EDC4Q6P2E9 1401 aaKnown RBP30.98■■■□□ 2.55
CBWD3-212ENST00000616550 CAMTA1Q9Y6Y1 1673 aa30.98■■■□□ 2.55
CBWD3-212ENST00000616550 BRWD3Q6RI45 1802 aa30.98■■■□□ 2.55
CBWD3-212ENST00000616550 SOX12O15370 315 aa30.97■■■□□ 2.55
CBWD3-212ENST00000616550 NME9Q86XW9 330 aa30.97■■■□□ 2.55
CBWD3-212ENST00000616550 LMO7Q8WWI1 1683 aa30.97■■■□□ 2.55
CBWD3-212ENST00000616550 SPATA31A1Q5TZJ5 1347 aa30.96■■■□□ 2.55
CBWD3-212ENST00000616550 AATKQ6ZMQ8 1374 aa30.95■■■□□ 2.55
CBWD3-212ENST00000616550 ZRANB1Q9UGI0 708 aa30.95■■■□□ 2.55
CBWD3-212ENST00000616550 USP31Q70CQ4 1352 aa30.94■■■□□ 2.54
CBWD3-212ENST00000616550 KRT27Q7Z3Y8 459 aa30.93■■■□□ 2.54
CBWD3-212ENST00000616550 LARP1Q6PKG0 1096 aaKnown RBP30.92■■■□□ 2.54
CBWD3-212ENST00000616550 ARHGEF25Q86VW2 580 aa30.92■■■□□ 2.54
CBWD3-212ENST00000616550 USP35Q9P2H5 1018 aa30.92■■■□□ 2.54
CBWD3-212ENST00000616550 EIF4G2P78344 907 aaKnown RBP eCLIP30.91■■■□□ 2.54
CBWD3-212ENST00000616550 ANKRD36BQ8N2N9 1353 aa30.9■■■□□ 2.54
CBWD3-212ENST00000616550 COL5A2P05997 1499 aaPredicted RBP30.89■■■□□ 2.53
CBWD3-212ENST00000616550 USP54Q70EL1 1684 aa30.87■■■□□ 2.53
CBWD3-212ENST00000616550 CCDC125Q86Z20 511 aa30.87■■■□□ 2.53
CBWD3-212ENST00000616550 COL18A1P39060 1754 aa30.87■■■□□ 2.53
CBWD3-212ENST00000616550 TCP11L2Q8N4U5 519 aa30.86■■■□□ 2.53
CBWD3-212ENST00000616550 NFAT5O94916 1531 aa30.86■■■□□ 2.53
CBWD3-212ENST00000616550 BARGINQ6ZT62 677 aa30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms