RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 FYB1O15117 783 aa15.84■□□□□ 0.13
TARDBP-217ENST00000616545 KRT28Q7Z3Y7 464 aa15.84■□□□□ 0.13
TARDBP-217ENST00000616545 SBNO1A3KN83 1393 aa15.84■□□□□ 0.13
TARDBP-217ENST00000616545 PARD3Q8TEW0 1356 aa15.84■□□□□ 0.13
TARDBP-217ENST00000616545 NRKQ7Z2Y5 1582 aa15.83■□□□□ 0.12
TARDBP-217ENST00000616545 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.82■□□□□ 0.12
TARDBP-217ENST00000616545 SCAF1Q9H7N4 1312 aaKnown RBP15.82■□□□□ 0.12
TARDBP-217ENST00000616545 USP31Q70CQ4 1352 aa15.82■□□□□ 0.12
TARDBP-217ENST00000616545 SOS2Q07890 1332 aaPredicted RBP15.81■□□□□ 0.12
TARDBP-217ENST00000616545 CC2D1BQ5T0F9 858 aaKnown RBP15.81■□□□□ 0.12
TARDBP-217ENST00000616545 MORC1Q86VD1 984 aa15.81■□□□□ 0.12
TARDBP-217ENST00000616545 COG3Q96JB2 828 aa15.81■□□□□ 0.12
TARDBP-217ENST00000616545 UBAP1LF5GYI3 381 aa15.8■□□□□ 0.12
TARDBP-217ENST00000616545 MYBBP1AQ9BQG0 1328 aaKnown RBP15.79■□□□□ 0.12
TARDBP-217ENST00000616545 CCER2I3L3R5 266 aa15.79■□□□□ 0.12
TARDBP-217ENST00000616545 NLRP13Q86W25 1043 aa15.79■□□□□ 0.12
TARDBP-217ENST00000616545 ABTB2Q8N961 1025 aa15.79■□□□□ 0.12
TARDBP-217ENST00000616545 PXDNQ92626 1479 aa15.78■□□□□ 0.12
TARDBP-217ENST00000616545 ARHGEF10O15013 1369 aa15.78■□□□□ 0.12
TARDBP-217ENST00000616545 KIF20BQ96Q89 1820 aa15.78■□□□□ 0.12
TARDBP-217ENST00000616545 PAK3O75914 559 aaPredicted RBP15.78■□□□□ 0.12
TARDBP-217ENST00000616545 NME9Q86XW9 330 aa15.78■□□□□ 0.12
TARDBP-217ENST00000616545 GGNBP2Q9H3C7 697 aa15.78■□□□□ 0.12
TARDBP-217ENST00000616545 AHDC1Q5TGY3 1603 aaPredicted RBP15.77■□□□□ 0.12
TARDBP-217ENST00000616545 ANKRD26Q9UPS8 1709 aa15.77■□□□□ 0.11
TARDBP-217ENST00000616545 OVOS2A0A0J9YW53 1432 aa15.77■□□□□ 0.11
TARDBP-217ENST00000616545 OVOS2Q6IE36 1432 aa15.77■□□□□ 0.11
TARDBP-217ENST00000616545 NHSL1Q5SYE7 1610 aa15.76■□□□□ 0.11
TARDBP-217ENST00000616545 SPATA31A3Q5VYP0 1347 aa15.76■□□□□ 0.11
TARDBP-217ENST00000616545 NLRP6P59044 892 aa15.76■□□□□ 0.11
TARDBP-217ENST00000616545 MIER1Q8N108 512 aa15.76■□□□□ 0.11
TARDBP-217ENST00000616545 TRPM3Q9HCF6 1732 aaPredicted RBP15.76■□□□□ 0.11
TARDBP-217ENST00000616545 USP54Q70EL1 1684 aa15.76■□□□□ 0.11
TARDBP-217ENST00000616545 ROBO1Q9Y6N7 1651 aa15.76■□□□□ 0.11
TARDBP-217ENST00000616545 TNS3Q68CZ2 1445 aa15.76■□□□□ 0.11
TARDBP-217ENST00000616545 AATKQ6ZMQ8 1374 aa15.75■□□□□ 0.11
TARDBP-217ENST00000616545 KCNH5Q8NCM2 988 aa15.75■□□□□ 0.11
TARDBP-217ENST00000616545 LRRC59Q96AG4 307 aaKnown RBP15.75■□□□□ 0.11
TARDBP-217ENST00000616545 PPP2R1AP30153 589 aa15.73■□□□□ 0.11
TARDBP-217ENST00000616545 XPCQ01831 940 aaPredicted RBP15.73■□□□□ 0.11
TARDBP-217ENST00000616545 PIK3C2AO00443 1686 aa15.73■□□□□ 0.11
TARDBP-217ENST00000616545 ALS2Q96Q42 1657 aa15.72■□□□□ 0.11
TARDBP-217ENST00000616545 USP19O94966 1318 aa15.71■□□□□ 0.11
TARDBP-217ENST00000616545 PIP4K2BP78356 416 aa15.71■□□□□ 0.11
TARDBP-217ENST00000616545 CNGB1Q14028 1251 aaPredicted RBP15.71■□□□□ 0.11
TARDBP-217ENST00000616545 DDX17Q92841 729 aaKnown RBP15.71■□□□□ 0.11
TARDBP-217ENST00000616545 KIF24Q5T7B8 1368 aa15.71■□□□□ 0.11
TARDBP-217ENST00000616545 LMOD2Q6P5Q4 547 aa15.7■□□□□ 0.1
TARDBP-217ENST00000616545 CFAP53Q96M91 514 aa15.69■□□□□ 0.1
TARDBP-217ENST00000616545 ZRANB1Q9UGI0 708 aa15.69■□□□□ 0.1
TARDBP-217ENST00000616545 MED1Q15648 1581 aaPredicted RBP15.69■□□□□ 0.1
TARDBP-217ENST00000616545 SLIT3O75094 1523 aa15.68■□□□□ 0.1
TARDBP-217ENST00000616545 SMG6Q86US8 1419 aaKnown RBP15.68■□□□□ 0.1
TARDBP-217ENST00000616545 INSRP06213 1382 aa15.67■□□□□ 0.1
TARDBP-217ENST00000616545 GCP02774 474 aa15.67■□□□□ 0.1
TARDBP-217ENST00000616545 TNNT2P45379 298 aaPredicted RBP15.67■□□□□ 0.1
TARDBP-217ENST00000616545 MTHFSP49914 203 aa15.67■□□□□ 0.1
TARDBP-217ENST00000616545 POLKQ9UBT6 870 aa15.67■□□□□ 0.1
TARDBP-217ENST00000616545 PHLPP1O60346 1717 aa15.66■□□□□ 0.1
TARDBP-217ENST00000616545 NUTM2GQ5VZR2 741 aa15.66■□□□□ 0.1
TARDBP-217ENST00000616545 MRS2Q9HD23 443 aa15.66■□□□□ 0.1
TARDBP-217ENST00000616545 PNPLA6Q8IY17 1366 aa15.65■□□□□ 0.1
TARDBP-217ENST00000616545 COL16A1Q07092 1604 aaPredicted RBP15.65■□□□□ 0.1
TARDBP-217ENST00000616545 RTL1A6NKG5 1358 aa15.64■□□□□ 0.09
TARDBP-217ENST00000616545 MARF1Q9Y4F3 1742 aaKnown RBP15.64■□□□□ 0.09
TARDBP-217ENST00000616545 CDK12Q9NYV4 1490 aaPredicted RBP15.64■□□□□ 0.09
TARDBP-217ENST00000616545 NFAT5O94916 1531 aa15.63■□□□□ 0.09
TARDBP-217ENST00000616545 CPDO75976 1380 aa15.62■□□□□ 0.09
TARDBP-217ENST00000616545 FLT4P35916 1363 aa15.62■□□□□ 0.09
TARDBP-217ENST00000616545 COL22A1Q8NFW1 1626 aaPredicted RBP15.62■□□□□ 0.09
TARDBP-217ENST00000616545 ARHGEF25Q86VW2 580 aa15.62■□□□□ 0.09
TARDBP-217ENST00000616545 PHF23Q9BUL5 403 aaPredicted RBP15.62■□□□□ 0.09
TARDBP-217ENST00000616545 NUDCQ9Y266 331 aa15.62■□□□□ 0.09
TARDBP-217ENST00000616545 ABCC6O95255 1503 aa15.62■□□□□ 0.09
TARDBP-217ENST00000616545 MAP3K19Q56UN5 1328 aa15.62■□□□□ 0.09
TARDBP-217ENST00000616545 JCADQ9P266 1359 aa15.62■□□□□ 0.09
TARDBP-217ENST00000616545 AMPHP49418 695 aa15.61■□□□□ 0.09
TARDBP-217ENST00000616545 HAP1P54257 671 aaPredicted RBP15.61■□□□□ 0.09
TARDBP-217ENST00000616545 MAP2P11137 1827 aaKnown RBP15.61■□□□□ 0.09
TARDBP-217ENST00000616545 PHRF1Q9P1Y6 1649 aaKnown RBP15.61■□□□□ 0.09
TARDBP-217ENST00000616545 RRS1Q15050 365 aaKnown RBP15.6■□□□□ 0.09
TARDBP-217ENST00000616545 EMILIN1Q9Y6C2 1016 aa15.6■□□□□ 0.09
TARDBP-217ENST00000616545 PPM1GO15355 546 aaPredicted RBP15.59■□□□□ 0.09
TARDBP-217ENST00000616545 DIAPH1O60610 1272 aaKnown RBP15.59■□□□□ 0.09
TARDBP-217ENST00000616545 PNISRQ8TF01 805 aaKnown RBP15.59■□□□□ 0.09
TARDBP-217ENST00000616545 IP6K1Q92551 441 aa15.59■□□□□ 0.09
TARDBP-217ENST00000616545 CRYBG1Q9Y4K1 1723 aa15.59■□□□□ 0.09
TARDBP-217ENST00000616545 BLMP54132 1417 aaPredicted RBP15.59■□□□□ 0.09
TARDBP-217ENST00000616545 SOX12O15370 315 aa15.58■□□□□ 0.08
TARDBP-217ENST00000616545 SPATA31A6Q5VVP1 1343 aa15.58■□□□□ 0.08
TARDBP-217ENST00000616545 FBLN1P23142 703 aa15.57■□□□□ 0.08
TARDBP-217ENST00000616545 HOXC9P31274 260 aa15.57■□□□□ 0.08
TARDBP-217ENST00000616545 WDR43Q15061 677 aaKnown RBP eCLIP15.57■□□□□ 0.08
TARDBP-217ENST00000616545 CCDC184Q52MB2 194 aa15.57■□□□□ 0.08
TARDBP-217ENST00000616545 CABLES1Q8TDN4 633 aa15.57■□□□□ 0.08
TARDBP-217ENST00000616545 SHPRHQ149N8 1683 aa15.57■□□□□ 0.08
TARDBP-217ENST00000616545 FBXO41Q8TF61 875 aa15.56■□□□□ 0.08
TARDBP-217ENST00000616545 COL3A1P02461 1466 aaPredicted RBP15.56■□□□□ 0.08
TARDBP-217ENST00000616545 HSPA1LP34931 641 aa15.55■□□□□ 0.08
TARDBP-217ENST00000616545 ZC3H6P61129 1189 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms