RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 EVC2Q86UK5 1308 aa16.62■□□□□ 0.25
PCDHA11-202ENST00000616325 ISY1Q9ULR0 285 aaKnown RBP16.61■□□□□ 0.25
PCDHA11-202ENST00000616325 NLRP1Q9C000 1473 aa16.61■□□□□ 0.25
PCDHA11-202ENST00000616325 SYNMO15061 1565 aa16.61■□□□□ 0.25
PCDHA11-202ENST00000616325 CD2BP2O95400 341 aaKnown RBP16.61■□□□□ 0.25
PCDHA11-202ENST00000616325 SLC24A1O60721 1099 aa16.6■□□□□ 0.25
PCDHA11-202ENST00000616325 CLTCL1P53675 1640 aa16.6■□□□□ 0.25
PCDHA11-202ENST00000616325 TSC1Q92574 1164 aa16.6■□□□□ 0.25
PCDHA11-202ENST00000616325 ZNF692Q9BU19 519 aaPredicted RBP16.6■□□□□ 0.25
PCDHA11-202ENST00000616325 PRDM4Q9UKN5 801 aa16.6■□□□□ 0.25
PCDHA11-202ENST00000616325 NGEFQ8N5V2 710 aa16.59■□□□□ 0.25
PCDHA11-202ENST00000616325 PTPRTO14522 1441 aa16.59■□□□□ 0.25
PCDHA11-202ENST00000616325 FOXD4L6Q3SYB3 417 aaPredicted RBP16.58■□□□□ 0.25
PCDHA11-202ENST00000616325 FOXD4L3Q6VB84 417 aaPredicted RBP16.58■□□□□ 0.25
PCDHA11-202ENST00000616325 JARID2Q92833 1246 aaPredicted RBP16.58■□□□□ 0.25
PCDHA11-202ENST00000616325 RAPGEF3O95398 923 aa16.58■□□□□ 0.24
PCDHA11-202ENST00000616325 PRKAR2BP31323 418 aa16.58■□□□□ 0.24
PCDHA11-202ENST00000616325 RBM27Q9P2N5 1060 aaKnown RBP16.58■□□□□ 0.24
PCDHA11-202ENST00000616325 ABCC2Q92887 1545 aa16.58■□□□□ 0.24
PCDHA11-202ENST00000616325 FAM177BA6PVY3 158 aa16.57■□□□□ 0.24
PCDHA11-202ENST00000616325 RAB3GAP1Q15042 981 aa16.57■□□□□ 0.24
PCDHA11-202ENST00000616325 NPC1L1Q9UHC9 1359 aa16.57■□□□□ 0.24
PCDHA11-202ENST00000616325 CHAMP1Q96JM3 812 aa16.57■□□□□ 0.24
PCDHA11-202ENST00000616325 PRAM1Q96QH2 718 aa16.57■□□□□ 0.24
PCDHA11-202ENST00000616325 KDM5AP29375 1690 aaKnown RBP16.57■□□□□ 0.24
PCDHA11-202ENST00000616325 DIAPH1O60610 1272 aaKnown RBP16.57■□□□□ 0.24
PCDHA11-202ENST00000616325 PRPF40AO75400 957 aaKnown RBP16.57■□□□□ 0.24
PCDHA11-202ENST00000616325 GAS2L2Q8NHY3 880 aa16.57■□□□□ 0.24
PCDHA11-202ENST00000616325 STAC3Q96MF2 364 aa16.57■□□□□ 0.24
PCDHA11-202ENST00000616325 NUTM2FA1L443 756 aa16.56■□□□□ 0.24
PCDHA11-202ENST00000616325 TRIM35Q9UPQ4 493 aa16.56■□□□□ 0.24
PCDHA11-202ENST00000616325 NPM1P06748 294 aaKnown RBP eCLIP16.56■□□□□ 0.24
PCDHA11-202ENST00000616325 NINLQ9Y2I6 1382 aa16.56■□□□□ 0.24
PCDHA11-202ENST00000616325 DCTN1Q14203 1278 aa16.55■□□□□ 0.24
PCDHA11-202ENST00000616325 FANCAO15360 1455 aa16.55■□□□□ 0.24
PCDHA11-202ENST00000616325 IPO8O15397 1037 aaKnown RBP16.55■□□□□ 0.24
PCDHA11-202ENST00000616325 C14orf93Q9H972 538 aaKnown RBP16.55■□□□□ 0.24
PCDHA11-202ENST00000616325 BAG4O95429 457 aaKnown RBP16.55■□□□□ 0.24
PCDHA11-202ENST00000616325 CBX1P83916 185 aa16.55■□□□□ 0.24
PCDHA11-202ENST00000616325 RBSNQ9H1K0 784 aa16.55■□□□□ 0.24
PCDHA11-202ENST00000616325 CABP1Q9NZU7 370 aa16.55■□□□□ 0.24
PCDHA11-202ENST00000616325 ATAD2Q6PL18 1390 aa16.54■□□□□ 0.24
PCDHA11-202ENST00000616325 PRIM1P49642 420 aaKnown RBP16.54■□□□□ 0.24
PCDHA11-202ENST00000616325 CHD1LQ86WJ1 897 aa16.54■□□□□ 0.24
PCDHA11-202ENST00000616325 TSPYL6Q8N831 410 aa16.54■□□□□ 0.24
PCDHA11-202ENST00000616325 NOL8Q76FK4 1167 aaKnown RBP16.54■□□□□ 0.24
PCDHA11-202ENST00000616325 ADGRL1O94910 1474 aa16.54■□□□□ 0.24
PCDHA11-202ENST00000616325 K7ELQ4 463 aaPredicted RBP16.54■□□□□ 0.24
PCDHA11-202ENST00000616325 PLCB2Q00722 1185 aa16.54■□□□□ 0.24
PCDHA11-202ENST00000616325 MAP7D2Q96T17 732 aa16.54■□□□□ 0.24
PCDHA11-202ENST00000616325 SMC5Q8IY18 1101 aa16.53■□□□□ 0.24
PCDHA11-202ENST00000616325 TRPM2O94759 1503 aa16.53■□□□□ 0.24
PCDHA11-202ENST00000616325 PPP1R9BQ96SB3 815 aa16.52■□□□□ 0.24
PCDHA11-202ENST00000616325 IGSF3O75054 1194 aa16.52■□□□□ 0.24
PCDHA11-202ENST00000616325 LAMC1P11047 1609 aa16.52■□□□□ 0.24
PCDHA11-202ENST00000616325 FAM83GA6ND36 823 aa16.52■□□□□ 0.23
PCDHA11-202ENST00000616325 IQGAP1P46940 1657 aa16.51■□□□□ 0.23
PCDHA11-202ENST00000616325 FYB1O15117 783 aa16.51■□□□□ 0.23
PCDHA11-202ENST00000616325 MLECQ14165 292 aa16.51■□□□□ 0.23
PCDHA11-202ENST00000616325 ZSCAN23Q3MJ62 389 aa16.51■□□□□ 0.23
PCDHA11-202ENST00000616325 RNF17Q9BXT8 1623 aaKnown RBP16.51■□□□□ 0.23
PCDHA11-202ENST00000616325 PLXNC1O60486 1568 aa16.51■□□□□ 0.23
PCDHA11-202ENST00000616325 CIZ1Q9ULV3 898 aaPredicted RBP16.51■□□□□ 0.23
PCDHA11-202ENST00000616325 SYCE3A1L190 88 aa16.51■□□□□ 0.23
PCDHA11-202ENST00000616325 VGFO15240 615 aaPredicted RBP16.51■□□□□ 0.23
PCDHA11-202ENST00000616325 PKP1Q13835 747 aa16.51■□□□□ 0.23
PCDHA11-202ENST00000616325 PHACTR3Q96KR7 559 aa16.51■□□□□ 0.23
PCDHA11-202ENST00000616325 KLHL40Q2TBA0 621 aa16.5■□□□□ 0.23
PCDHA11-202ENST00000616325 PLPPR3Q6T4P5 718 aa16.5■□□□□ 0.23
PCDHA11-202ENST00000616325 ZBTB40Q9NUA8 1239 aa16.5■□□□□ 0.23
PCDHA11-202ENST00000616325 TERF2IPQ9NYB0 399 aa16.5■□□□□ 0.23
PCDHA11-202ENST00000616325 AAMPQ13685 434 aa16.5■□□□□ 0.23
PCDHA11-202ENST00000616325 MYOM1P52179 1685 aa16.5■□□□□ 0.23
PCDHA11-202ENST00000616325 ZNF830Q96NB3 372 aaPredicted RBP16.5■□□□□ 0.23
PCDHA11-202ENST00000616325 ABCC1P33527 1531 aa16.49■□□□□ 0.23
PCDHA11-202ENST00000616325 PTMSP20962 102 aa16.49■□□□□ 0.23
PCDHA11-202ENST00000616325 IDI1Q13907 227 aa16.49■□□□□ 0.23
PCDHA11-202ENST00000616325 HDGFL2Q7Z4V5 671 aaPredicted RBP16.49■□□□□ 0.23
PCDHA11-202ENST00000616325 WAPLQ7Z5K2 1190 aa16.49■□□□□ 0.23
PCDHA11-202ENST00000616325 A0A1W2PP64 1363 aa16.49■□□□□ 0.23
PCDHA11-202ENST00000616325 ZRANB1Q9UGI0 708 aa16.49■□□□□ 0.23
PCDHA11-202ENST00000616325 C16orf71Q8IYS4 520 aaPredicted RBP16.48■□□□□ 0.23
PCDHA11-202ENST00000616325 EMILIN1Q9Y6C2 1016 aa16.48■□□□□ 0.23
PCDHA11-202ENST00000616325 KIF16BQ96L93 1317 aa16.48■□□□□ 0.23
PCDHA11-202ENST00000616325 RRS1Q15050 365 aaKnown RBP16.48■□□□□ 0.23
PCDHA11-202ENST00000616325 TBC1D9Q6ZT07 1266 aa16.48■□□□□ 0.23
PCDHA11-202ENST00000616325 BCL11BQ9C0K0 894 aaPredicted RBP16.48■□□□□ 0.23
PCDHA11-202ENST00000616325 NOL7Q9UMY1 257 aaKnown RBP16.48■□□□□ 0.23
PCDHA11-202ENST00000616325 HDAC1Q13547 482 aaPredicted RBP16.47■□□□□ 0.23
PCDHA11-202ENST00000616325 KRT24Q2M2I5 525 aa16.47■□□□□ 0.23
PCDHA11-202ENST00000616325 SNX21Q969T3 373 aa16.47■□□□□ 0.23
PCDHA11-202ENST00000616325 PHF23Q9BUL5 403 aaPredicted RBP16.47■□□□□ 0.23
PCDHA11-202ENST00000616325 CCDC27Q2M243 656 aa16.47■□□□□ 0.23
PCDHA11-202ENST00000616325 CLASP1Q7Z460 1538 aa16.47■□□□□ 0.23
PCDHA11-202ENST00000616325 SMARCA5O60264 1052 aaPredicted RBP16.47■□□□□ 0.23
PCDHA11-202ENST00000616325 ABCA6Q8N139 1617 aa16.46■□□□□ 0.23
PCDHA11-202ENST00000616325 CHD1O14646 1710 aa16.46■□□□□ 0.23
PCDHA11-202ENST00000616325 SPHKAPQ2M3C7 1700 aa16.46■□□□□ 0.23
PCDHA11-202ENST00000616325 SPDYE4A6NLX3 237 aa16.46■□□□□ 0.23
PCDHA11-202ENST00000616325 RBM25P49756 843 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms