RNA–Protein interactions for RNA: ENST00000616230.1

PCDHGC3-203, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 2

Gene PCDHGC3, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-203ENST00000616230 NRAPQ86VF7 1730 aa17.58■□□□□ 0.4
PCDHGC3-203ENST00000616230 TONSLQ96HA7 1378 aa17.57■□□□□ 0.4
PCDHGC3-203ENST00000616230 ACEP12821 1306 aa17.57■□□□□ 0.4
PCDHGC3-203ENST00000616230 PLEKHG3A1L390 1219 aa17.57■□□□□ 0.4
PCDHGC3-203ENST00000616230 PLEKHG5O94827 1062 aa17.57■□□□□ 0.4
PCDHGC3-203ENST00000616230 UNC5CLQ8IV45 518 aa17.57■□□□□ 0.4
PCDHGC3-203ENST00000616230 GLI3P10071 1580 aa17.57■□□□□ 0.4
PCDHGC3-203ENST00000616230 PPIP5K1Q6PFW1 1433 aa17.56■□□□□ 0.4
PCDHGC3-203ENST00000616230 COL14A1Q05707 1796 aaKnown RBP17.56■□□□□ 0.4
PCDHGC3-203ENST00000616230 PAK3O75914 559 aaPredicted RBP17.56■□□□□ 0.4
PCDHGC3-203ENST00000616230 SRPK2P78362 688 aaKnown RBP17.56■□□□□ 0.4
PCDHGC3-203ENST00000616230 UPF1Q92900 1129 aaKnown RBP eCLIP17.56■□□□□ 0.4
PCDHGC3-203ENST00000616230 RALGAPBQ86X10 1494 aa17.56■□□□□ 0.4
PCDHGC3-203ENST00000616230 CABP2Q9NPB3 220 aa17.55■□□□□ 0.4
PCDHGC3-203ENST00000616230 GJD4Q96KN9 370 aaPredicted RBP17.54■□□□□ 0.4
PCDHGC3-203ENST00000616230 EVC2Q86UK5 1308 aa17.52■□□□□ 0.4
PCDHGC3-203ENST00000616230 FAM83GA6ND36 823 aa17.52■□□□□ 0.4
PCDHGC3-203ENST00000616230 PIAS4Q8N2W9 510 aaPredicted RBP17.52■□□□□ 0.4
PCDHGC3-203ENST00000616230 AKAP12Q02952 1782 aa17.51■□□□□ 0.39
PCDHGC3-203ENST00000616230 BRWD3Q6RI45 1802 aa17.51■□□□□ 0.39
PCDHGC3-203ENST00000616230 EP400Q96L91 3159 aa17.5■□□□□ 0.39
PCDHGC3-203ENST00000616230 NRKQ7Z2Y5 1582 aa17.5■□□□□ 0.39
PCDHGC3-203ENST00000616230 VPS72Q15906 364 aa17.5■□□□□ 0.39
PCDHGC3-203ENST00000616230 SBNO2Q9Y2G9 1366 aa17.5■□□□□ 0.39
PCDHGC3-203ENST00000616230 CARD11Q9BXL7 1154 aa17.49■□□□□ 0.39
PCDHGC3-203ENST00000616230 BRD4O60885 1362 aaPredicted RBP17.49■□□□□ 0.39
PCDHGC3-203ENST00000616230 USP6P35125 1406 aa17.48■□□□□ 0.39
PCDHGC3-203ENST00000616230 CABP1Q9NZU7 370 aa17.48■□□□□ 0.39
PCDHGC3-203ENST00000616230 ATAD2Q6PL18 1390 aa17.48■□□□□ 0.39
PCDHGC3-203ENST00000616230 NUTM2GQ5VZR2 741 aa17.47■□□□□ 0.39
PCDHGC3-203ENST00000616230 BTG4Q9NY30 223 aa17.47■□□□□ 0.39
PCDHGC3-203ENST00000616230 PIK3C2AO00443 1686 aa17.46■□□□□ 0.39
PCDHGC3-203ENST00000616230 ABTB2Q8N961 1025 aa17.46■□□□□ 0.39
PCDHGC3-203ENST00000616230 SSH2Q76I76 1423 aa17.46■□□□□ 0.39
PCDHGC3-203ENST00000616230 USP19O94966 1318 aa17.46■□□□□ 0.38
PCDHGC3-203ENST00000616230 KIAA0232Q92628 1395 aa17.45■□□□□ 0.38
PCDHGC3-203ENST00000616230 MON2Q7Z3U7 1717 aa17.44■□□□□ 0.38
PCDHGC3-203ENST00000616230 PRDM11Q9NQV5 511 aa17.44■□□□□ 0.38
PCDHGC3-203ENST00000616230 LMO7Q8WWI1 1683 aa17.44■□□□□ 0.38
PCDHGC3-203ENST00000616230 ONECUT3O60422 494 aaPredicted RBP17.43■□□□□ 0.38
PCDHGC3-203ENST00000616230 CCDC9Q9Y3X0 531 aaKnown RBP17.43■□□□□ 0.38
PCDHGC3-203ENST00000616230 ZC3H6P61129 1189 aaKnown RBP17.42■□□□□ 0.38
PCDHGC3-203ENST00000616230 NLRP13Q86W25 1043 aa17.42■□□□□ 0.38
PCDHGC3-203ENST00000616230 SLIT3O75094 1523 aa17.42■□□□□ 0.38
PCDHGC3-203ENST00000616230 CPSF1Q10570 1443 aaKnown RBP17.41■□□□□ 0.38
PCDHGC3-203ENST00000616230 MSH5O43196 834 aa17.41■□□□□ 0.38
PCDHGC3-203ENST00000616230 CHRNA2Q15822 529 aa17.41■□□□□ 0.38
PCDHGC3-203ENST00000616230 SEPT12Q8IYM1 358 aa17.41■□□□□ 0.38
PCDHGC3-203ENST00000616230 CPDO75976 1380 aa17.4■□□□□ 0.38
PCDHGC3-203ENST00000616230 THSD7AQ9UPZ6 1657 aa17.4■□□□□ 0.38
PCDHGC3-203ENST00000616230 ZNF692Q9BU19 519 aaPredicted RBP17.4■□□□□ 0.38
PCDHGC3-203ENST00000616230 GCP02774 474 aa17.39■□□□□ 0.37
PCDHGC3-203ENST00000616230 SPATA31A5Q5VU36 1347 aa17.39■□□□□ 0.37
PCDHGC3-203ENST00000616230 SPATA31A7Q8IWB4 1347 aa17.39■□□□□ 0.37
PCDHGC3-203ENST00000616230 CLSPNQ9HAW4 1339 aa17.39■□□□□ 0.37
PCDHGC3-203ENST00000616230 CAMTA1Q9Y6Y1 1673 aa17.39■□□□□ 0.37
PCDHGC3-203ENST00000616230 CD163L1Q9NR16 1453 aa17.37■□□□□ 0.37
PCDHGC3-203ENST00000616230 USP54Q70EL1 1684 aa17.37■□□□□ 0.37
PCDHGC3-203ENST00000616230 FAM98CQ17RN3 349 aaKnown RBP17.37■□□□□ 0.37
PCDHGC3-203ENST00000616230 TTC21BQ7Z4L5 1316 aa17.37■□□□□ 0.37
PCDHGC3-203ENST00000616230 NLRP6P59044 892 aa17.36■□□□□ 0.37
PCDHGC3-203ENST00000616230 TTC21AQ8NDW8 1320 aa17.36■□□□□ 0.37
PCDHGC3-203ENST00000616230 KTN1Q86UP2 1357 aaKnown RBP17.36■□□□□ 0.37
PCDHGC3-203ENST00000616230 COL18A1P39060 1754 aa17.35■□□□□ 0.37
PCDHGC3-203ENST00000616230 PUS7Q96PZ0 661 aaKnown RBP17.35■□□□□ 0.37
PCDHGC3-203ENST00000616230 TESK2Q96S53 571 aa17.35■□□□□ 0.37
PCDHGC3-203ENST00000616230 PCGF6Q9BYE7 350 aa17.35■□□□□ 0.37
PCDHGC3-203ENST00000616230 SPATA31A1Q5TZJ5 1347 aa17.35■□□□□ 0.37
PCDHGC3-203ENST00000616230 ST20-MTHFSA0A0A6YYL1 179 aa17.34■□□□□ 0.37
PCDHGC3-203ENST00000616230 KRT27Q7Z3Y8 459 aa17.34■□□□□ 0.37
PCDHGC3-203ENST00000616230 CCDC125Q86Z20 511 aa17.34■□□□□ 0.37
PCDHGC3-203ENST00000616230 STRN4Q9NRL3 753 aa17.34■□□□□ 0.37
PCDHGC3-203ENST00000616230 COL5A2P05997 1499 aaPredicted RBP17.33■□□□□ 0.37
PCDHGC3-203ENST00000616230 A0A0G2JS52 829 aa17.33■□□□□ 0.36
PCDHGC3-203ENST00000616230 MYT1Q01538 1121 aa17.33■□□□□ 0.36
PCDHGC3-203ENST00000616230 TIMELESSQ9UNS1 1208 aa17.33■□□□□ 0.36
PCDHGC3-203ENST00000616230 BLMP54132 1417 aaPredicted RBP17.32■□□□□ 0.36
PCDHGC3-203ENST00000616230 RGPD5Q99666 1765 aa17.32■□□□□ 0.36
PCDHGC3-203ENST00000616230 NFAT5O94916 1531 aa17.31■□□□□ 0.36
PCDHGC3-203ENST00000616230 USP47Q96K76 1375 aa17.31■□□□□ 0.36
PCDHGC3-203ENST00000616230 SLC24A1O60721 1099 aa17.31■□□□□ 0.36
PCDHGC3-203ENST00000616230 EVA1CP58658 441 aa17.31■□□□□ 0.36
PCDHGC3-203ENST00000616230 AATKQ6ZMQ8 1374 aa17.3■□□□□ 0.36
PCDHGC3-203ENST00000616230 TMC1Q8TDI8 760 aa17.3■□□□□ 0.36
PCDHGC3-203ENST00000616230 SLC12A5Q9H2X9 1139 aa17.3■□□□□ 0.36
PCDHGC3-203ENST00000616230 EDC4Q6P2E9 1401 aaKnown RBP17.3■□□□□ 0.36
PCDHGC3-203ENST00000616230 A0A1W2PP64 1363 aa17.29■□□□□ 0.36
PCDHGC3-203ENST00000616230 NINLQ9Y2I6 1382 aa17.29■□□□□ 0.36
PCDHGC3-203ENST00000616230 LARP1Q6PKG0 1096 aaKnown RBP17.29■□□□□ 0.36
PCDHGC3-203ENST00000616230 HDGFL2Q7Z4V5 671 aaPredicted RBP17.29■□□□□ 0.36
PCDHGC3-203ENST00000616230 USP31Q70CQ4 1352 aa17.28■□□□□ 0.36
PCDHGC3-203ENST00000616230 WNK3Q9BYP7 1800 aa17.28■□□□□ 0.36
PCDHGC3-203ENST00000616230 RGPD1P0DJD0 1748 aa17.28■□□□□ 0.36
PCDHGC3-203ENST00000616230 PARP4Q9UKK3 1724 aaKnown RBP17.28■□□□□ 0.36
PCDHGC3-203ENST00000616230 BARGINQ6ZT62 677 aa17.28■□□□□ 0.36
PCDHGC3-203ENST00000616230 KCNH5Q8NCM2 988 aa17.28■□□□□ 0.36
PCDHGC3-203ENST00000616230 LTN1O94822 1766 aa17.28■□□□□ 0.36
PCDHGC3-203ENST00000616230 ABCC6O95255 1503 aa17.27■□□□□ 0.36
PCDHGC3-203ENST00000616230 ZBTB7CA1YPR0 619 aa17.27■□□□□ 0.36
PCDHGC3-203ENST00000616230 ARHGEF25Q86VW2 580 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms