RNA–Protein interactions for RNA: ENST00000615771.5

RBM39-244, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-244ENST00000615771 SIAH2O43255 324 aa10.9□□□□□ -0.66
RBM39-244ENST00000615771 SH3BP2P78314 561 aa10.9□□□□□ -0.66
RBM39-244ENST00000615771 LIMD1Q9UGP4 676 aa10.9□□□□□ -0.66
RBM39-244ENST00000615771 SLC24A1O60721 1099 aa10.89□□□□□ -0.67
RBM39-244ENST00000615771 EHBP1Q8NDI1 1231 aa10.89□□□□□ -0.67
RBM39-244ENST00000615771 DACH1Q9UI36 760 aa10.89□□□□□ -0.67
RBM39-244ENST00000615771 CABLES1Q8TDN4 633 aa10.88□□□□□ -0.67
RBM39-244ENST00000615771 ZNF775Q96BV0 537 aaPredicted RBP10.88□□□□□ -0.67
RBM39-244ENST00000615771 LILRB3O75022 631 aa10.87□□□□□ -0.67
RBM39-244ENST00000615771 F12P00748 615 aaPredicted RBP10.87□□□□□ -0.67
RBM39-244ENST00000615771 ZNF511Q8NB15 262 aa10.87□□□□□ -0.67
RBM39-244ENST00000615771 RSPH6AQ9H0K4 717 aa10.87□□□□□ -0.67
RBM39-244ENST00000615771 THOC2Q8NI27 1593 aaKnown RBP10.86□□□□□ -0.67
RBM39-244ENST00000615771 BAP1Q92560 729 aa10.86□□□□□ -0.67
RBM39-244ENST00000615771 HPS1Q92902 700 aa10.86□□□□□ -0.67
RBM39-244ENST00000615771 ALDH1A1P00352 501 aa10.85□□□□□ -0.67
RBM39-244ENST00000615771 QPCTQ16769 361 aa10.85□□□□□ -0.67
RBM39-244ENST00000615771 CLK2P49760 499 aaKnown RBP10.84□□□□□ -0.67
RBM39-244ENST00000615771 CSPP1Q1MSJ5 1256 aa10.84□□□□□ -0.67
RBM39-244ENST00000615771 LINC01559Q495D7 138 aa10.84□□□□□ -0.67
RBM39-244ENST00000615771 MPNDQ8N594 471 aa10.84□□□□□ -0.67
RBM39-244ENST00000615771 VARSP26640 1264 aaKnown RBP10.83□□□□□ -0.68
RBM39-244ENST00000615771 CTHP32929 405 aa10.83□□□□□ -0.68
RBM39-244ENST00000615771 GMPR2Q9P2T1 348 aaKnown RBP10.83□□□□□ -0.68
RBM39-244ENST00000615771 NUTM2BA6NNL0 878 aaPredicted RBP10.82□□□□□ -0.68
RBM39-244ENST00000615771 NUTM2EB1AL46 878 aaPredicted RBP10.82□□□□□ -0.68
RBM39-244ENST00000615771 NUTM2DQ5VT03 806 aaPredicted RBP10.82□□□□□ -0.68
RBM39-244ENST00000615771 NUTM2AQ8IVF1 878 aaPredicted RBP10.82□□□□□ -0.68
RBM39-244ENST00000615771 ATP13A2Q9NQ11 1180 aa10.82□□□□□ -0.68
RBM39-244ENST00000615771 MAP10Q9P2G4 905 aa10.82□□□□□ -0.68
RBM39-244ENST00000615771 NESP48681 1621 aa10.82□□□□□ -0.68
RBM39-244ENST00000615771 PER1O15534 1290 aaPredicted RBP10.8□□□□□ -0.68
RBM39-244ENST00000615771 SMARCA2P51531 1590 aa10.79□□□□□ -0.68
RBM39-244ENST00000615771 C11orf95C9JLR9 678 aaPredicted RBP10.79□□□□□ -0.68
RBM39-244ENST00000615771 HELBQ8NG08 1087 aaPredicted RBP10.79□□□□□ -0.68
RBM39-244ENST00000615771 KDM4CQ9H3R0 1056 aa10.79□□□□□ -0.68
RBM39-244ENST00000615771 WASF2Q9Y6W5 498 aa10.79□□□□□ -0.68
RBM39-244ENST00000615771 RTL5Q5HYW3 569 aaPredicted RBP10.78□□□□□ -0.68
RBM39-244ENST00000615771 PLEKHG3A1L390 1219 aa10.77□□□□□ -0.69
RBM39-244ENST00000615771 DDRGK1Q96HY6 314 aa10.77□□□□□ -0.69
RBM39-244ENST00000615771 SENP2Q9HC62 589 aa10.77□□□□□ -0.69
RBM39-244ENST00000615771 TLL2Q9Y6L7 1015 aa10.77□□□□□ -0.69
RBM39-244ENST00000615771 SKIV2LQ15477 1246 aaKnown RBP10.76□□□□□ -0.69
RBM39-244ENST00000615771 SH3D19Q5HYK7 790 aa10.76□□□□□ -0.69
RBM39-244ENST00000615771 ARMC2Q8NEN0 867 aa10.76□□□□□ -0.69
RBM39-244ENST00000615771 FAM174AQ8TBP5 190 aa10.76□□□□□ -0.69
RBM39-244ENST00000615771 TSC1Q92574 1164 aa10.76□□□□□ -0.69
RBM39-244ENST00000615771 TRIM47Q96LD4 638 aa10.76□□□□□ -0.69
RBM39-244ENST00000615771 GPBP1L1Q9HC44 474 aaPredicted RBP10.76□□□□□ -0.69
RBM39-244ENST00000615771 POLR3EQ9NVU0 708 aa10.76□□□□□ -0.69
RBM39-244ENST00000615771 KIF21AQ7Z4S6 1674 aa10.74□□□□□ -0.69
RBM39-244ENST00000615771 FOXJ1Q92949 421 aa10.74□□□□□ -0.69
RBM39-244ENST00000615771 KIFC2Q96AC6 838 aa10.74□□□□□ -0.69
RBM39-244ENST00000615771 BPHLQ86WA6 291 aaPredicted RBP10.73□□□□□ -0.69
RBM39-244ENST00000615771 CDK15Q96Q40 435 aa10.73□□□□□ -0.69
RBM39-244ENST00000615771 NCAPD3P42695 1498 aa10.73□□□□□ -0.69
RBM39-244ENST00000615771 CAPN5O15484 640 aaPredicted RBP10.72□□□□□ -0.69
RBM39-244ENST00000615771 LCE2AQ5TA79 106 aaPredicted RBP10.72□□□□□ -0.69
RBM39-244ENST00000615771 NBPF14Q5TI25 921 aa10.72□□□□□ -0.69
RBM39-244ENST00000615771 FAM117AQ9C073 453 aa10.72□□□□□ -0.69
RBM39-244ENST00000615771 ADH1CP00326 375 aa10.71□□□□□ -0.69
RBM39-244ENST00000615771 NNTQ13423 1086 aa10.71□□□□□ -0.69
RBM39-244ENST00000615771 C4orf48Q5BLP8 95 aa10.71□□□□□ -0.69
RBM39-244ENST00000615771 TREML4Q6UXN2 200 aa10.71□□□□□ -0.69
RBM39-244ENST00000615771 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.71□□□□□ -0.69
RBM39-244ENST00000615771 BAZ1AQ9NRL2 1556 aaPredicted RBP10.71□□□□□ -0.69
RBM39-244ENST00000615771 SNRPBP14678 240 aaKnown RBP10.7□□□□□ -0.7
RBM39-244ENST00000615771 PPP2R2DQ66LE6 453 aa10.7□□□□□ -0.7
RBM39-244ENST00000615771 SH3RF1Q7Z6J0 888 aa10.7□□□□□ -0.7
RBM39-244ENST00000615771 GPKOWQ92917 476 aaPredicted RBP eCLIP10.69□□□□□ -0.71e-21■□□□□ 8.8
RBM39-244ENST00000615771 C1QTNF2Q9BXJ5 285 aa10.69□□□□□ -0.7
RBM39-244ENST00000615771 SH3BP5LQ7L8J4 393 aa10.68□□□□□ -0.7
RBM39-244ENST00000615771 TRIM46Q7Z4K8 759 aa10.68□□□□□ -0.7
RBM39-244ENST00000615771 CTDSPL2Q05D32 466 aa10.67□□□□□ -0.7
RBM39-244ENST00000615771 AGERQ15109 404 aa10.67□□□□□ -0.7
RBM39-244ENST00000615771 KLF16Q9BXK1 252 aaPredicted RBP10.67□□□□□ -0.7
RBM39-244ENST00000615771 HMGXB3Q12766 1538 aa10.67□□□□□ -0.7
RBM39-244ENST00000615771 BMP1P13497 986 aa10.66□□□□□ -0.7
RBM39-244ENST00000615771 FBXO31Q5XUX0 539 aaPredicted RBP10.66□□□□□ -0.7
RBM39-244ENST00000615771 TRMT44Q8IYL2 757 aaKnown RBP10.66□□□□□ -0.7
RBM39-244ENST00000615771 PROCA1Q8NCQ7 364 aaPredicted RBP10.66□□□□□ -0.7
RBM39-244ENST00000615771 ATAD2BQ9ULI0 1458 aa10.66□□□□□ -0.7
RBM39-244ENST00000615771 TIMP2P16035 220 aa10.65□□□□□ -0.7
RBM39-244ENST00000615771 NR5A1Q13285 461 aa10.65□□□□□ -0.7
RBM39-244ENST00000615771 MAP4K5Q9Y4K4 846 aa10.65□□□□□ -0.7
RBM39-244ENST00000615771 LAMC3Q9Y6N6 1575 aa10.65□□□□□ -0.71
RBM39-244ENST00000615771 NFX1Q12986 1120 aaKnown RBP10.64□□□□□ -0.71
RBM39-244ENST00000615771 GRM5P41594 1212 aa10.63□□□□□ -0.71
RBM39-244ENST00000615771 WDR4P57081 412 aaKnown RBP10.63□□□□□ -0.71
RBM39-244ENST00000615771 ZC3H4Q9UPT8 1303 aaKnown RBP10.62□□□□□ -0.71
RBM39-244ENST00000615771 WFS1O76024 890 aa10.62□□□□□ -0.71
RBM39-244ENST00000615771 ARID5BQ14865 1188 aa10.62□□□□□ -0.71
RBM39-244ENST00000615771 GOPCQ9HD26 462 aa10.62□□□□□ -0.71
RBM39-244ENST00000615771 NR3C2P08235 984 aa10.61□□□□□ -0.71
RBM39-244ENST00000615771 PDXDC2PQ6P474 469 aa10.61□□□□□ -0.71
RBM39-244ENST00000615771 LRRN4Q8WUT4 740 aa10.61□□□□□ -0.71
RBM39-244ENST00000615771 MRPL14Q6P1L8 145 aaKnown RBP10.6□□□□□ -0.71
RBM39-244ENST00000615771 FKBPLQ9UIM3 349 aa10.6□□□□□ -0.71
RBM39-244ENST00000615771 RIMBP3CA6NJZ7 1639 aa10.59□□□□□ -0.71
RBM39-244ENST00000615771 RIMBP3BA6NNM3 1639 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms