RNA–Protein interactions for RNA: ENST00000614565.4

CDH4-203, Transcript of cadherin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH4, Length 6,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-203ENST00000614565 FAM184AQ8NB25 1140 aa15.42■□□□□ 0.06
CDH4-203ENST00000614565 RRS1Q15050 365 aaKnown RBP15.42■□□□□ 0.06
CDH4-203ENST00000614565 E9PSI1 815 aa15.42■□□□□ 0.06
CDH4-203ENST00000614565 IFT140Q96RY7 1462 aa15.41■□□□□ 0.06
CDH4-203ENST00000614565 MIA2Q96PC5 1412 aa15.41■□□□□ 0.06
CDH4-203ENST00000614565 C6orf229H3BNL8 230 aa15.41■□□□□ 0.06
CDH4-203ENST00000614565 AMOTL2Q9Y2J4 779 aa15.41■□□□□ 0.06
CDH4-203ENST00000614565 RWDD1Q9H446 243 aaPredicted RBP15.41■□□□□ 0.06
CDH4-203ENST00000614565 TRIM29Q14134 588 aa15.4■□□□□ 0.06
CDH4-203ENST00000614565 ANKRD45Q5TZF3 282 aa15.4■□□□□ 0.06
CDH4-203ENST00000614565 GNL3LQ9NVN8 582 aaKnown RBP15.4■□□□□ 0.06
CDH4-203ENST00000614565 TTC39AQ5SRH9 613 aa15.4■□□□□ 0.06
CDH4-203ENST00000614565 SIL1Q9H173 461 aa15.4■□□□□ 0.06
CDH4-203ENST00000614565 CRBNQ96SW2 442 aa15.39■□□□□ 0.05
CDH4-203ENST00000614565 CUL7Q14999 1698 aa15.39■□□□□ 0.05
CDH4-203ENST00000614565 CCDC34Q96HJ3 373 aa15.38■□□□□ 0.05
CDH4-203ENST00000614565 STARD3NLO95772 234 aa15.38■□□□□ 0.05
CDH4-203ENST00000614565 KIF16BQ96L93 1317 aa15.38■□□□□ 0.05
CDH4-203ENST00000614565 A0A0U1RQG5 324 aaPredicted RBP15.38■□□□□ 0.05
CDH4-203ENST00000614565 TBC1D2BQ9UPU7 963 aa15.37■□□□□ 0.05
CDH4-203ENST00000614565 RALBP1Q15311 655 aa15.37■□□□□ 0.05
CDH4-203ENST00000614565 PCMTD1Q96MG8 357 aaPredicted RBP15.37■□□□□ 0.05
CDH4-203ENST00000614565 SCLT1Q96NL6 688 aa15.37■□□□□ 0.05
CDH4-203ENST00000614565 GJA3Q9Y6H8 435 aa15.37■□□□□ 0.05
CDH4-203ENST00000614565 CPLX1O14810 134 aa15.37■□□□□ 0.05
CDH4-203ENST00000614565 ZNF652Q9Y2D9 606 aa15.37■□□□□ 0.05
CDH4-203ENST00000614565 CABLES1Q8TDN4 633 aa15.37■□□□□ 0.05
CDH4-203ENST00000614565 SULT6B1Q6IMI4 303 aa15.36■□□□□ 0.05
CDH4-203ENST00000614565 ANO2Q9NQ90 1003 aa15.36■□□□□ 0.05
CDH4-203ENST00000614565 LAMC3Q9Y6N6 1575 aa15.36■□□□□ 0.05
CDH4-203ENST00000614565 RTEL1-TNFRSF6BF6WH68 1400 aa15.35■□□□□ 0.05
CDH4-203ENST00000614565 TTC16Q8NEE8 873 aa15.35■□□□□ 0.05
CDH4-203ENST00000614565 BTBD11A6QL63 1104 aa15.35■□□□□ 0.05
CDH4-203ENST00000614565 DISP3Q9P2K9 1392 aa15.35■□□□□ 0.05
CDH4-203ENST00000614565 CRACR2BQ8N4Y2 399 aaPredicted RBP15.35■□□□□ 0.05
CDH4-203ENST00000614565 PIBF1Q8WXW3 757 aa15.34■□□□□ 0.05
CDH4-203ENST00000614565 CFAP43Q8NDM7 1665 aa15.34■□□□□ 0.05
CDH4-203ENST00000614565 HTATSF1O43719 755 aaKnown RBP15.34■□□□□ 0.05
CDH4-203ENST00000614565 MATR3P43243 847 aaKnown RBP eCLIP15.34■□□□□ 0.05
CDH4-203ENST00000614565 EAPPQ56P03 285 aaPredicted RBP15.33■□□□□ 0.04
CDH4-203ENST00000614565 RAI14Q9P0K7 980 aa15.33■□□□□ 0.04
CDH4-203ENST00000614565 SLC4A8Q2Y0W8 1093 aa15.33■□□□□ 0.04
CDH4-203ENST00000614565 IGHMBP2P38935 993 aaKnown RBP15.32■□□□□ 0.04
CDH4-203ENST00000614565 ZFYVE27Q5T4F4 411 aa15.32■□□□□ 0.04
CDH4-203ENST00000614565 STK32BQ9NY57 414 aa15.32■□□□□ 0.04
CDH4-203ENST00000614565 CADPS2Q86UW7 1296 aa15.32■□□□□ 0.04
CDH4-203ENST00000614565 GPTP24298 496 aa15.32■□□□□ 0.04
CDH4-203ENST00000614565 MSNP26038 577 aaKnown RBP15.32■□□□□ 0.04
CDH4-203ENST00000614565 GAS2L2Q8NHY3 880 aa15.32■□□□□ 0.04
CDH4-203ENST00000614565 HMGB2P26583 209 aaKnown RBP15.32■□□□□ 0.04
CDH4-203ENST00000614565 CCDC57Q2TAC2 916 aa15.32■□□□□ 0.04
CDH4-203ENST00000614565 SLC3A2P08195 630 aaKnown RBP15.31■□□□□ 0.04
CDH4-203ENST00000614565 ABCF2Q9UG63 623 aa15.31■□□□□ 0.04
CDH4-203ENST00000614565 CPLX2Q6PUV4 134 aaKnown RBP15.31■□□□□ 0.04
CDH4-203ENST00000614565 PHF8Q9UPP1 1060 aa15.31■□□□□ 0.04
CDH4-203ENST00000614565 EHBP1L1Q8N3D4 1523 aa15.31■□□□□ 0.04
CDH4-203ENST00000614565 LMOD1P29536 600 aaPredicted RBP15.31■□□□□ 0.04
CDH4-203ENST00000614565 RCAN3Q9UKA8 241 aa15.31■□□□□ 0.04
CDH4-203ENST00000614565 APAF1O14727 1248 aa15.3■□□□□ 0.04
CDH4-203ENST00000614565 UBTFL1P0CB47 393 aaPredicted RBP15.3■□□□□ 0.04
CDH4-203ENST00000614565 ST5P78524 1137 aa15.3■□□□□ 0.04
CDH4-203ENST00000614565 RALYLQ86SE5 291 aaKnown RBP15.3■□□□□ 0.04
CDH4-203ENST00000614565 APBA3O96018 575 aa15.3■□□□□ 0.04
CDH4-203ENST00000614565 PARP3Q9Y6F1 533 aa15.29■□□□□ 0.04
CDH4-203ENST00000614565 USP5P45974 858 aa15.29■□□□□ 0.04
CDH4-203ENST00000614565 TPM4P67936 248 aa15.29■□□□□ 0.04
CDH4-203ENST00000614565 ATP2B1P20020 1258 aa15.29■□□□□ 0.04
CDH4-203ENST00000614565 EPRSP07814 1512 aaKnown RBP15.28■□□□□ 0.04
CDH4-203ENST00000614565 TRMT1LQ7Z2T5 733 aaKnown RBP15.28■□□□□ 0.04
CDH4-203ENST00000614565 CDK13Q14004 1512 aaKnown RBP15.28■□□□□ 0.04
CDH4-203ENST00000614565 F8W031 263 aaPredicted RBP15.28■□□□□ 0.04
CDH4-203ENST00000614565 EP400NLQ6ZTU2 488 aa15.28■□□□□ 0.04
CDH4-203ENST00000614565 PTPN23Q9H3S7 1636 aa15.28■□□□□ 0.04
CDH4-203ENST00000614565 NUDT16Q96DE0 195 aaKnown RBP15.28■□□□□ 0.04
CDH4-203ENST00000614565 LRPPRCP42704 1394 aaKnown RBP15.28■□□□□ 0.04
CDH4-203ENST00000614565 FAM161AQ3B820 660 aa15.28■□□□□ 0.04
CDH4-203ENST00000614565 FKBP4Q02790 459 aaKnown RBP eCLIP15.27■□□□□ 0.04
CDH4-203ENST00000614565 SLC52A1Q9NWF4 448 aa15.27■□□□□ 0.03
CDH4-203ENST00000614565 CCDC158Q5M9N0 1113 aa15.27■□□□□ 0.03
CDH4-203ENST00000614565 BAG6P46379 1132 aa15.26■□□□□ 0.03
CDH4-203ENST00000614565 PODXL2Q9NZ53 605 aa15.26■□□□□ 0.03
CDH4-203ENST00000614565 ATP6V1AP38606 617 aa15.26■□□□□ 0.03
CDH4-203ENST00000614565 HDGFL1Q5TGJ6 251 aa15.26■□□□□ 0.03
CDH4-203ENST00000614565 PRKRIP1Q9H875 184 aaPredicted RBP15.26■□□□□ 0.03
CDH4-203ENST00000614565 LRP2BPQ9P2M1 347 aa15.26■□□□□ 0.03
CDH4-203ENST00000614565 SUPT6HQ7KZ85 1726 aaKnown RBP15.26■□□□□ 0.03
CDH4-203ENST00000614565 PRKAR2BP31323 418 aa15.26■□□□□ 0.03
CDH4-203ENST00000614565 MIS18AQ9NYP9 233 aa15.26■□□□□ 0.03
CDH4-203ENST00000614565 DDB1Q16531 1140 aa15.26■□□□□ 0.03
CDH4-203ENST00000614565 CCDC30Q5VVM6 783 aa15.26■□□□□ 0.03
CDH4-203ENST00000614565 USP21Q9UK80 565 aa15.26■□□□□ 0.03
CDH4-203ENST00000614565 FEZ1Q99689 392 aa15.25■□□□□ 0.03
CDH4-203ENST00000614565 AKNAQ7Z591 1439 aa15.25■□□□□ 0.03
CDH4-203ENST00000614565 ZHX3Q9H4I2 956 aa15.25■□□□□ 0.03
CDH4-203ENST00000614565 FAM98CQ17RN3 349 aaKnown RBP15.25■□□□□ 0.03
CDH4-203ENST00000614565 TPM2P07951 284 aa15.25■□□□□ 0.03
CDH4-203ENST00000614565 ODF2Q5BJF6 829 aa15.25■□□□□ 0.03
CDH4-203ENST00000614565 RFX1P22670 979 aa15.24■□□□□ 0.03
CDH4-203ENST00000614565 CT47A1Q5JQC4 288 aaPredicted RBP15.24■□□□□ 0.03
CDH4-203ENST00000614565 KCNH5Q8NCM2 988 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms