RNA–Protein interactions for RNA: ENST00000614494.1

TARDBP-216, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-216ENST00000614494 NGDNQ8NEJ9 315 aaKnown RBP10.5□□□□□ -0.73
TARDBP-216ENST00000614494 ALS2Q96Q42 1657 aa10.5□□□□□ -0.73
TARDBP-216ENST00000614494 TRPM3Q9HCF6 1732 aaPredicted RBP10.5□□□□□ -0.73
TARDBP-216ENST00000614494 CCDC9Q9Y3X0 531 aaKnown RBP10.49□□□□□ -0.73
TARDBP-216ENST00000614494 ARHGEF28Q8N1W1 1705 aaKnown RBP10.48□□□□□ -0.73
TARDBP-216ENST00000614494 C11orf95C9JLR9 678 aaPredicted RBP10.48□□□□□ -0.73
TARDBP-216ENST00000614494 DSG3P32926 999 aa10.48□□□□□ -0.73
TARDBP-216ENST00000614494 KRT27Q7Z3Y8 459 aa10.48□□□□□ -0.73
TARDBP-216ENST00000614494 SEPT12Q8IYM1 358 aa10.48□□□□□ -0.73
TARDBP-216ENST00000614494 MINK1Q8N4C8 1332 aaPredicted RBP10.48□□□□□ -0.73
TARDBP-216ENST00000614494 RGPD8O14715 1765 aaPredicted RBP10.47□□□□□ -0.73
TARDBP-216ENST00000614494 PMFBP1Q8TBY8 1022 aa10.47□□□□□ -0.73
TARDBP-216ENST00000614494 KDM2AQ9Y2K7 1162 aa10.47□□□□□ -0.73
TARDBP-216ENST00000614494 CCDC61Q9Y6R9 512 aa10.47□□□□□ -0.73
TARDBP-216ENST00000614494 POLR3AO14802 1390 aaPredicted RBP10.47□□□□□ -0.73
TARDBP-216ENST00000614494 BAG6P46379 1132 aa10.46□□□□□ -0.73
TARDBP-216ENST00000614494 PRDM11Q9NQV5 511 aa10.46□□□□□ -0.73
TARDBP-216ENST00000614494 NRAPQ86VF7 1730 aa10.46□□□□□ -0.74
TARDBP-216ENST00000614494 PRR36Q9H6K5 1346 aa10.45□□□□□ -0.74
TARDBP-216ENST00000614494 A0A0G2JS52 829 aa10.45□□□□□ -0.74
TARDBP-216ENST00000614494 FAM83GA6ND36 823 aa10.45□□□□□ -0.74
TARDBP-216ENST00000614494 PAK3O75914 559 aaPredicted RBP10.45□□□□□ -0.74
TARDBP-216ENST00000614494 MYT1Q01538 1121 aa10.45□□□□□ -0.74
TARDBP-216ENST00000614494 CABLES1Q8TDN4 633 aa10.45□□□□□ -0.74
TARDBP-216ENST00000614494 NUDT16Q96DE0 195 aaKnown RBP10.45□□□□□ -0.74
TARDBP-216ENST00000614494 HIRIP3Q9BW71 556 aaPredicted RBP10.45□□□□□ -0.74
TARDBP-216ENST00000614494 BTG4Q9NY30 223 aa10.45□□□□□ -0.74
TARDBP-216ENST00000614494 TOPAZ1Q8N9V7 1692 aa10.44□□□□□ -0.74
TARDBP-216ENST00000614494 PARD3Q8TEW0 1356 aa10.44□□□□□ -0.74
TARDBP-216ENST00000614494 SPATA31A5Q5VU36 1347 aa10.44□□□□□ -0.74
TARDBP-216ENST00000614494 SPATA31A7Q8IWB4 1347 aa10.44□□□□□ -0.74
TARDBP-216ENST00000614494 PLEKHG3A1L390 1219 aa10.44□□□□□ -0.74
TARDBP-216ENST00000614494 CAPN15O75808 1086 aa10.44□□□□□ -0.74
TARDBP-216ENST00000614494 CRYBG1Q9Y4K1 1723 aa10.44□□□□□ -0.74
TARDBP-216ENST00000614494 DISP2A7MBM2 1401 aa10.43□□□□□ -0.74
TARDBP-216ENST00000614494 CPDO75976 1380 aa10.43□□□□□ -0.74
TARDBP-216ENST00000614494 EP400Q96L91 3159 aa10.43□□□□□ -0.74
TARDBP-216ENST00000614494 RGPD1P0DJD0 1748 aa10.42□□□□□ -0.74
TARDBP-216ENST00000614494 CENPJQ9HC77 1338 aaPredicted RBP10.42□□□□□ -0.74
TARDBP-216ENST00000614494 THSD7AQ9UPZ6 1657 aa10.42□□□□□ -0.74
TARDBP-216ENST00000614494 NPM3O75607 178 aaKnown RBP10.42□□□□□ -0.74
TARDBP-216ENST00000614494 CDK19Q9BWU1 502 aa10.42□□□□□ -0.74
TARDBP-216ENST00000614494 PHRF1Q9P1Y6 1649 aaKnown RBP10.41□□□□□ -0.74
TARDBP-216ENST00000614494 FAM98CQ17RN3 349 aaKnown RBP10.41□□□□□ -0.74
TARDBP-216ENST00000614494 NLRP13Q86W25 1043 aa10.41□□□□□ -0.74
TARDBP-216ENST00000614494 THRAP3Q9Y2W1 955 aaKnown RBP10.41□□□□□ -0.74
TARDBP-216ENST00000614494 LRP5O75197 1615 aa10.4□□□□□ -0.74
TARDBP-216ENST00000614494 KIAA0232Q92628 1395 aa10.4□□□□□ -0.74
TARDBP-216ENST00000614494 BRWD3Q6RI45 1802 aa10.4□□□□□ -0.74
TARDBP-216ENST00000614494 USP19O94966 1318 aa10.4□□□□□ -0.74
TARDBP-216ENST00000614494 ACEP12821 1306 aa10.4□□□□□ -0.74
TARDBP-216ENST00000614494 SPATA31A1Q5TZJ5 1347 aa10.4□□□□□ -0.74
TARDBP-216ENST00000614494 SRPK2P78362 688 aaKnown RBP10.4□□□□□ -0.74
TARDBP-216ENST00000614494 NBPF8Q3BBV2 869 aa10.4□□□□□ -0.74
TARDBP-216ENST00000614494 FAM196AQ6ZSG2 479 aa10.4□□□□□ -0.74
TARDBP-216ENST00000614494 BARGINQ6ZT62 677 aa10.4□□□□□ -0.74
TARDBP-216ENST00000614494 NRKQ7Z2Y5 1582 aa10.39□□□□□ -0.75
TARDBP-216ENST00000614494 ABTB2Q8N961 1025 aa10.39□□□□□ -0.75
TARDBP-216ENST00000614494 PPIP5K1Q6PFW1 1433 aa10.39□□□□□ -0.75
TARDBP-216ENST00000614494 SSH2Q76I76 1423 aa10.39□□□□□ -0.75
TARDBP-216ENST00000614494 EVC2Q86UK5 1308 aa10.38□□□□□ -0.75
TARDBP-216ENST00000614494 EVA1CP58658 441 aa10.38□□□□□ -0.75
TARDBP-216ENST00000614494 PLEKHG5O94827 1062 aa10.37□□□□□ -0.75
TARDBP-216ENST00000614494 ZNF692Q9BU19 519 aaPredicted RBP10.37□□□□□ -0.75
TARDBP-216ENST00000614494 QRICH2Q9H0J4 1663 aa10.37□□□□□ -0.75
TARDBP-216ENST00000614494 SBNO2Q9Y2G9 1366 aa10.37□□□□□ -0.75
TARDBP-216ENST00000614494 USP6P35125 1406 aa10.36□□□□□ -0.75
TARDBP-216ENST00000614494 SLC24A1O60721 1099 aa10.36□□□□□ -0.75
TARDBP-216ENST00000614494 PDE3BQ13370 1112 aa10.36□□□□□ -0.75
TARDBP-216ENST00000614494 TCP11L2Q8N4U5 519 aa10.36□□□□□ -0.75
TARDBP-216ENST00000614494 KCNH5Q8NCM2 988 aa10.36□□□□□ -0.75
TARDBP-216ENST00000614494 CDCA7Q9BWT1 371 aaPredicted RBP10.36□□□□□ -0.75
TARDBP-216ENST00000614494 ABCC6O95255 1503 aa10.36□□□□□ -0.75
TARDBP-216ENST00000614494 AATKQ6ZMQ8 1374 aa10.36□□□□□ -0.75
TARDBP-216ENST00000614494 TRPM1Q7Z4N2 1603 aa10.36□□□□□ -0.75
TARDBP-216ENST00000614494 LMO7Q8WWI1 1683 aa10.35□□□□□ -0.75
TARDBP-216ENST00000614494 CRB1P82279 1406 aa10.35□□□□□ -0.75
TARDBP-216ENST00000614494 GCP02774 474 aa10.35□□□□□ -0.75
TARDBP-216ENST00000614494 DEFB132Q7Z7B7 95 aa10.35□□□□□ -0.75
TARDBP-216ENST00000614494 STRN4Q9NRL3 753 aa10.35□□□□□ -0.75
TARDBP-216ENST00000614494 ROCK2O75116 1388 aaKnown RBP10.35□□□□□ -0.75
TARDBP-216ENST00000614494 TTC21AQ8NDW8 1320 aa10.34□□□□□ -0.75
TARDBP-216ENST00000614494 SLIT3O75094 1523 aa10.34□□□□□ -0.75
TARDBP-216ENST00000614494 ZC3H6P61129 1189 aaKnown RBP10.34□□□□□ -0.75
TARDBP-216ENST00000614494 OVOS2A0A0G2JMS6 1433 aa10.33□□□□□ -0.76
TARDBP-216ENST00000614494 OVOS2A0A0J9YW53 1432 aa10.33□□□□□ -0.76
TARDBP-216ENST00000614494 OVOS2Q6IE36 1432 aa10.33□□□□□ -0.76
TARDBP-216ENST00000614494 U3KPZ7 1027 aaPredicted RBP10.33□□□□□ -0.76
TARDBP-216ENST00000614494 COL5A2P05997 1499 aaPredicted RBP10.33□□□□□ -0.76
TARDBP-216ENST00000614494 TNS1Q9HBL0 1735 aaKnown RBP10.33□□□□□ -0.76
TARDBP-216ENST00000614494 PARP4Q9UKK3 1724 aaKnown RBP10.33□□□□□ -0.76
TARDBP-216ENST00000614494 CAMTA1Q9Y6Y1 1673 aa10.32□□□□□ -0.76
TARDBP-216ENST00000614494 CHRNA2Q15822 529 aa10.32□□□□□ -0.76
TARDBP-216ENST00000614494 NBPF1Q3BBV0 1214 aa10.32□□□□□ -0.76
TARDBP-216ENST00000614494 NBPF14Q5TI25 921 aa10.32□□□□□ -0.76
TARDBP-216ENST00000614494 NLRP6P59044 892 aa10.31□□□□□ -0.76
TARDBP-216ENST00000614494 L3MBTL2Q969R5 705 aa10.31□□□□□ -0.76
TARDBP-216ENST00000614494 CABP2Q9NPB3 220 aa10.31□□□□□ -0.76
TARDBP-216ENST00000614494 CABP1Q9NZU7 370 aa10.31□□□□□ -0.76
TARDBP-216ENST00000614494 RGPD3A6NKT7 1758 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms