RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 AMER1Q5JTC6 1135 aaPredicted RBP8.57□□□□□ -1.04
CBWD3-210ENST00000614398 CABP1Q9NZU7 370 aa8.57□□□□□ -1.04
CBWD3-210ENST00000614398 PHF8Q9UPP1 1060 aa8.57□□□□□ -1.04
CBWD3-210ENST00000614398 DIEXFQ68CQ4 756 aaKnown RBP8.56□□□□□ -1.04
CBWD3-210ENST00000614398 CARD14Q9BXL6 1004 aa8.56□□□□□ -1.04
CBWD3-210ENST00000614398 ROBO1Q9Y6N7 1651 aa8.56□□□□□ -1.04
CBWD3-210ENST00000614398 PHRF1Q9P1Y6 1649 aaKnown RBP8.56□□□□□ -1.04
CBWD3-210ENST00000614398 C14orf37Q86TY3 774 aa8.56□□□□□ -1.04
CBWD3-210ENST00000614398 OVOS2A0A0J9YW53 1432 aa8.55□□□□□ -1.04
CBWD3-210ENST00000614398 OVOS2Q6IE36 1432 aa8.55□□□□□ -1.04
CBWD3-210ENST00000614398 ACEP12821 1306 aa8.55□□□□□ -1.04
CBWD3-210ENST00000614398 RALBP1Q15311 655 aa8.55□□□□□ -1.04
CBWD3-210ENST00000614398 COL22A1Q8NFW1 1626 aaPredicted RBP8.55□□□□□ -1.04
CBWD3-210ENST00000614398 SLIT3O75094 1523 aa8.55□□□□□ -1.04
CBWD3-210ENST00000614398 SMG6Q86US8 1419 aaKnown RBP8.55□□□□□ -1.04
CBWD3-210ENST00000614398 ABCC6O95255 1503 aa8.54□□□□□ -1.04
CBWD3-210ENST00000614398 TMC1Q8TDI8 760 aa8.54□□□□□ -1.04
CBWD3-210ENST00000614398 KNSTRNQ9Y448 316 aa8.54□□□□□ -1.04
CBWD3-210ENST00000614398 NPHP3Q7Z494 1330 aa8.53□□□□□ -1.04
CBWD3-210ENST00000614398 TTC21BQ7Z4L5 1316 aa8.53□□□□□ -1.04
CBWD3-210ENST00000614398 SLAIN2Q9P270 581 aa8.53□□□□□ -1.04
CBWD3-210ENST00000614398 ABCA3Q99758 1704 aa8.53□□□□□ -1.04
CBWD3-210ENST00000614398 POLR3GLQ9BT43 218 aa8.53□□□□□ -1.04
CBWD3-210ENST00000614398 AATKQ6ZMQ8 1374 aa8.53□□□□□ -1.04
CBWD3-210ENST00000614398 SOS2Q07890 1332 aaPredicted RBP8.52□□□□□ -1.04
CBWD3-210ENST00000614398 TNS3Q68CZ2 1445 aa8.52□□□□□ -1.04
CBWD3-210ENST00000614398 COL16A1Q07092 1604 aaPredicted RBP8.52□□□□□ -1.04
CBWD3-210ENST00000614398 BRINP3Q76B58 766 aa8.52□□□□□ -1.05
CBWD3-210ENST00000614398 RBM33Q96EV2 1170 aaKnown RBP8.52□□□□□ -1.05
CBWD3-210ENST00000614398 PRKRIP1Q9H875 184 aaPredicted RBP8.52□□□□□ -1.05
CBWD3-210ENST00000614398 CCER2I3L3R5 266 aa8.52□□□□□ -1.05
CBWD3-210ENST00000614398 NFAT5O94916 1531 aa8.52□□□□□ -1.05
CBWD3-210ENST00000614398 ANP32CO43423 234 aa8.51□□□□□ -1.05
CBWD3-210ENST00000614398 ESCO1Q5FWF5 840 aa8.51□□□□□ -1.05
CBWD3-210ENST00000614398 NGDNQ8NEJ9 315 aaKnown RBP8.51□□□□□ -1.05
CBWD3-210ENST00000614398 CERKQ8TCT0 537 aa8.51□□□□□ -1.05
CBWD3-210ENST00000614398 ARHGEF10O15013 1369 aa8.51□□□□□ -1.05
CBWD3-210ENST00000614398 INSRP06213 1382 aa8.51□□□□□ -1.05
CBWD3-210ENST00000614398 KIF24Q5T7B8 1368 aa8.51□□□□□ -1.05
CBWD3-210ENST00000614398 SHPRHQ149N8 1683 aa8.51□□□□□ -1.05
CBWD3-210ENST00000614398 PSME1Q06323 249 aa8.51□□□□□ -1.05
CBWD3-210ENST00000614398 ORAI2Q96SN7 254 aa8.51□□□□□ -1.05
CBWD3-210ENST00000614398 PHLPP1O60346 1717 aa8.51□□□□□ -1.05
CBWD3-210ENST00000614398 USP19O94966 1318 aa8.5□□□□□ -1.05
CBWD3-210ENST00000614398 FYB1O15117 783 aa8.5□□□□□ -1.05
CBWD3-210ENST00000614398 MYBBP1AQ9BQG0 1328 aaKnown RBP8.5□□□□□ -1.05
CBWD3-210ENST00000614398 TOM1O60784 492 aa8.5□□□□□ -1.05
CBWD3-210ENST00000614398 CDK12Q9NYV4 1490 aaPredicted RBP8.49□□□□□ -1.05
CBWD3-210ENST00000614398 PMFBP1Q8TBY8 1022 aa8.49□□□□□ -1.05
CBWD3-210ENST00000614398 SPATA31A3Q5VYP0 1347 aa8.49□□□□□ -1.05
CBWD3-210ENST00000614398 KRT28Q7Z3Y7 464 aa8.48□□□□□ -1.05
CBWD3-210ENST00000614398 RTL1A6NKG5 1358 aa8.48□□□□□ -1.05
CBWD3-210ENST00000614398 COL3A1P02461 1466 aaPredicted RBP8.48□□□□□ -1.05
CBWD3-210ENST00000614398 NUTM2FA1L443 756 aa8.48□□□□□ -1.05
CBWD3-210ENST00000614398 MAP2P11137 1827 aaKnown RBP8.48□□□□□ -1.05
CBWD3-210ENST00000614398 LTN1O94822 1766 aa8.47□□□□□ -1.05
CBWD3-210ENST00000614398 NLRP13Q86W25 1043 aa8.47□□□□□ -1.05
CBWD3-210ENST00000614398 POTEDQ86YR6 584 aa8.47□□□□□ -1.05
CBWD3-210ENST00000614398 PNPLA6Q8IY17 1366 aa8.47□□□□□ -1.05
CBWD3-210ENST00000614398 PEAK1Q9H792 1746 aa8.47□□□□□ -1.05
CBWD3-210ENST00000614398 MORC1Q86VD1 984 aa8.46□□□□□ -1.05
CBWD3-210ENST00000614398 NME9Q86XW9 330 aa8.46□□□□□ -1.05
CBWD3-210ENST00000614398 COG3Q96JB2 828 aa8.46□□□□□ -1.05
CBWD3-210ENST00000614398 FAM208AQ9UK61 1670 aaKnown RBP8.46□□□□□ -1.05
CBWD3-210ENST00000614398 CAMTA1Q9Y6Y1 1673 aa8.46□□□□□ -1.05
CBWD3-210ENST00000614398 COL18A1P39060 1754 aa8.46□□□□□ -1.05
CBWD3-210ENST00000614398 CPDO75976 1380 aa8.46□□□□□ -1.06
CBWD3-210ENST00000614398 FOXO3O43524 673 aa8.46□□□□□ -1.06
CBWD3-210ENST00000614398 PPP2R1AP30153 589 aa8.46□□□□□ -1.06
CBWD3-210ENST00000614398 RGPD1P0DJD0 1748 aa8.45□□□□□ -1.06
CBWD3-210ENST00000614398 LMO7Q8WWI1 1683 aa8.45□□□□□ -1.06
CBWD3-210ENST00000614398 MIER1Q8N108 512 aa8.45□□□□□ -1.06
CBWD3-210ENST00000614398 KCNH5Q8NCM2 988 aa8.45□□□□□ -1.06
CBWD3-210ENST00000614398 CC2D1BQ5T0F9 858 aaKnown RBP8.44□□□□□ -1.06
CBWD3-210ENST00000614398 GGNBP2Q9H3C7 697 aa8.44□□□□□ -1.06
CBWD3-210ENST00000614398 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.44□□□□□ -1.06
CBWD3-210ENST00000614398 COL14A1Q05707 1796 aaKnown RBP8.43□□□□□ -1.06
CBWD3-210ENST00000614398 UBAP1LF5GYI3 381 aa8.43□□□□□ -1.06
CBWD3-210ENST00000614398 PLEKHG2Q9H7P9 1386 aa8.43□□□□□ -1.06
CBWD3-210ENST00000614398 ABTB2Q8N961 1025 aa8.43□□□□□ -1.06
CBWD3-210ENST00000614398 LRRC59Q96AG4 307 aaKnown RBP8.43□□□□□ -1.06
CBWD3-210ENST00000614398 BLMP54132 1417 aaPredicted RBP8.43□□□□□ -1.06
CBWD3-210ENST00000614398 NCAPD2Q15021 1401 aa8.42□□□□□ -1.06
CBWD3-210ENST00000614398 FLT4P35916 1363 aa8.42□□□□□ -1.06
CBWD3-210ENST00000614398 NLRP6P59044 892 aa8.42□□□□□ -1.06
CBWD3-210ENST00000614398 NWD2Q9ULI1 1742 aa8.42□□□□□ -1.06
CBWD3-210ENST00000614398 GTF3C3Q9Y5Q9 886 aa8.42□□□□□ -1.06
CBWD3-210ENST00000614398 POLKQ9UBT6 870 aa8.41□□□□□ -1.06
CBWD3-210ENST00000614398 ZRANB1Q9UGI0 708 aa8.41□□□□□ -1.06
CBWD3-210ENST00000614398 JCADQ9P266 1359 aa8.41□□□□□ -1.06
CBWD3-210ENST00000614398 CFAP53Q96M91 514 aa8.4□□□□□ -1.06
CBWD3-210ENST00000614398 NRAPQ86VF7 1730 aa8.4□□□□□ -1.06
CBWD3-210ENST00000614398 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.4□□□□□ -1.06
CBWD3-210ENST00000614398 PAK3O75914 559 aaPredicted RBP8.4□□□□□ -1.07
CBWD3-210ENST00000614398 ARHGEF25Q86VW2 580 aa8.4□□□□□ -1.07
CBWD3-210ENST00000614398 ANP32EQ9BTT0 268 aa8.4□□□□□ -1.07
CBWD3-210ENST00000614398 PLCH1Q4KWH8 1693 aa8.39□□□□□ -1.07
CBWD3-210ENST00000614398 GCP02774 474 aa8.39□□□□□ -1.07
CBWD3-210ENST00000614398 MAP3K19Q56UN5 1328 aa8.39□□□□□ -1.07
CBWD3-210ENST00000614398 MTHFSP49914 203 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms