RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 PRR20BP86481 221 aa4□□□□□ -1.77
CBWD3-209ENST00000614377 PRR20AP86496 221 aa4□□□□□ -1.77
CBWD3-209ENST00000614377 FOXC1Q12948 553 aa4□□□□□ -1.77
CBWD3-209ENST00000614377 PWP2Q15269 919 aaKnown RBP4□□□□□ -1.77
CBWD3-209ENST00000614377 YTHDC1Q96MU7 727 aaKnown RBP4□□□□□ -1.77
CBWD3-209ENST00000614377 AAASQ9NRG9 546 aa4□□□□□ -1.77
CBWD3-209ENST00000614377 RIPOR2Q9Y4F9 1068 aa4□□□□□ -1.77
CBWD3-209ENST00000614377 KDM4AO75164 1064 aa3.99□□□□□ -1.77
CBWD3-209ENST00000614377 FLIIQ13045 1269 aa3.99□□□□□ -1.77
CBWD3-209ENST00000614377 NBPF20Q3BBV1 942 aa3.99□□□□□ -1.77
CBWD3-209ENST00000614377 BARGINQ6ZT62 677 aa3.99□□□□□ -1.77
CBWD3-209ENST00000614377 CEP120Q8N960 986 aa3.99□□□□□ -1.77
CBWD3-209ENST00000614377 ANKLE1Q8NAG6 615 aa3.99□□□□□ -1.77
CBWD3-209ENST00000614377 GDF9O60383 454 aa3.99□□□□□ -1.77
CBWD3-209ENST00000614377 LCE2AQ5TA79 106 aaPredicted RBP3.99□□□□□ -1.77
CBWD3-209ENST00000614377 CCER1Q8TC90 406 aaPredicted RBP3.99□□□□□ -1.77
CBWD3-209ENST00000614377 ZC3H15Q8WU90 426 aaKnown RBP3.99□□□□□ -1.77
CBWD3-209ENST00000614377 PRR14Q9BWN1 585 aa3.99□□□□□ -1.77
CBWD3-209ENST00000614377 CARD10Q9BWT7 1032 aa3.99□□□□□ -1.77
CBWD3-209ENST00000614377 HDAC5Q9UQL6 1122 aa3.99□□□□□ -1.77
CBWD3-209ENST00000614377 WFS1O76024 890 aa3.99□□□□□ -1.77
CBWD3-209ENST00000614377 KRTAP9-2Q9BYQ4 174 aa3.99□□□□□ -1.77
CBWD3-209ENST00000614377 SLC24A3Q9HC58 644 aa3.99□□□□□ -1.77
CBWD3-209ENST00000614377 DACH1Q9UI36 760 aa3.99□□□□□ -1.77
CBWD3-209ENST00000614377 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.98□□□□□ -1.77
CBWD3-209ENST00000614377 OSBPP22059 807 aa3.98□□□□□ -1.77
CBWD3-209ENST00000614377 IRX3P78415 501 aaPredicted RBP3.98□□□□□ -1.77
CBWD3-209ENST00000614377 SPATA32Q96LK8 384 aa3.98□□□□□ -1.77
CBWD3-209ENST00000614377 MYH16Q9H6N6 1097 aa3.98□□□□□ -1.77
CBWD3-209ENST00000614377 RBM27Q9P2N5 1060 aaKnown RBP3.98□□□□□ -1.77
CBWD3-209ENST00000614377 SH3BP1Q9Y3L3 701 aa3.98□□□□□ -1.77
CBWD3-209ENST00000614377 PLA2G2CQ5R387 149 aa3.98□□□□□ -1.77
CBWD3-209ENST00000614377 UTP14CQ5TAP6 766 aaKnown RBP3.98□□□□□ -1.77
CBWD3-209ENST00000614377 NBPF11Q86T75 865 aa3.98□□□□□ -1.77
CBWD3-209ENST00000614377 EGFL6Q8IUX8 553 aa3.98□□□□□ -1.77
CBWD3-209ENST00000614377 WDR70Q9NW82 654 aa3.98□□□□□ -1.77
CBWD3-209ENST00000614377 A6NJR5 290 aa3.97□□□□□ -1.77
CBWD3-209ENST00000614377 NOL8Q76FK4 1167 aaKnown RBP3.97□□□□□ -1.77
CBWD3-209ENST00000614377 TMTC2Q8N394 836 aa3.97□□□□□ -1.77
CBWD3-209ENST00000614377 ANP32BQ92688 251 aaKnown RBP3.97□□□□□ -1.77
CBWD3-209ENST00000614377 GMPR2Q9P2T1 348 aaKnown RBP3.97□□□□□ -1.77
CBWD3-209ENST00000614377 KRTAP9-6A0A140TA67 174 aa3.97□□□□□ -1.77
CBWD3-209ENST00000614377 OS9Q13438 667 aaPredicted RBP3.97□□□□□ -1.77
CBWD3-209ENST00000614377 NBPF1Q3BBV0 1214 aa3.97□□□□□ -1.77
CBWD3-209ENST00000614377 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.97□□□□□ -1.77
CBWD3-209ENST00000614377 PDCL3Q9H2J4 239 aa3.97□□□□□ -1.77
CBWD3-209ENST00000614377 SLC20A2Q08357 652 aa3.96□□□□□ -1.77
CBWD3-209ENST00000614377 SMAP1Q8IYB5 467 aaPredicted RBP3.96□□□□□ -1.77
CBWD3-209ENST00000614377 SGSM3Q96HU1 749 aa3.96□□□□□ -1.77
CBWD3-209ENST00000614377 TTC36A6NLP5 189 aa3.96□□□□□ -1.78
CBWD3-209ENST00000614377 TRAK2O60296 914 aa3.96□□□□□ -1.78
CBWD3-209ENST00000614377 ERCC3P19447 782 aa3.96□□□□□ -1.78
CBWD3-209ENST00000614377 E2F4Q16254 413 aa3.96□□□□□ -1.78
CBWD3-209ENST00000614377 CFHP08603 1231 aa3.96□□□□□ -1.78
CBWD3-209ENST00000614377 SPTY2D1Q68D10 685 aaPredicted RBP3.96□□□□□ -1.78
CBWD3-209ENST00000614377 TTC13Q8NBP0 860 aa3.96□□□□□ -1.78
CBWD3-209ENST00000614377 TRIM44Q96DX7 344 aaPredicted RBP3.96□□□□□ -1.78
CBWD3-209ENST00000614377 EYA1Q99502 592 aa3.96□□□□□ -1.78
CBWD3-209ENST00000614377 NPDC1Q9NQX5 325 aaPredicted RBP3.96□□□□□ -1.78
CBWD3-209ENST00000614377 ZC3H4Q9UPT8 1303 aaKnown RBP3.95□□□□□ -1.78
CBWD3-209ENST00000614377 ADH1BP00325 375 aa3.95□□□□□ -1.78
CBWD3-209ENST00000614377 KMT5BQ4FZB7 885 aa3.95□□□□□ -1.78
CBWD3-209ENST00000614377 SLC6A16Q9GZN6 736 aa3.95□□□□□ -1.78
CBWD3-209ENST00000614377 IGSF5Q9NSI5 407 aa3.95□□□□□ -1.78
CBWD3-209ENST00000614377 STK17AQ9UEE5 414 aa3.95□□□□□ -1.78
CBWD3-209ENST00000614377 AXIN1O15169 862 aa3.95□□□□□ -1.78
CBWD3-209ENST00000614377 HSP90AA1P07900 732 aaKnown RBP3.95□□□□□ -1.78
CBWD3-209ENST00000614377 SERPINA10Q9UK55 444 aa3.95□□□□□ -1.78
CBWD3-209ENST00000614377 LAS1LQ9Y4W2 734 aaKnown RBP3.95□□□□□ -1.78
CBWD3-209ENST00000614377 IGF1RP08069 1367 aa3.95□□□□□ -1.78
CBWD3-209ENST00000614377 IRF6O14896 467 aa3.94□□□□□ -1.78
CBWD3-209ENST00000614377 GORABQ5T7V8 394 aa3.94□□□□□ -1.78
CBWD3-209ENST00000614377 YY1AP1Q9H869 796 aa3.94□□□□□ -1.78
CBWD3-209ENST00000614377 PKD2L1Q9P0L9 805 aa3.94□□□□□ -1.78
CBWD3-209ENST00000614377 ACTN4O43707 911 aaKnown RBP3.94□□□□□ -1.78
CBWD3-209ENST00000614377 TSHZ1Q6ZSZ6 1077 aa3.94□□□□□ -1.78
CBWD3-209ENST00000614377 DNAJB2P25686 324 aa3.93□□□□□ -1.78
CBWD3-209ENST00000614377 MCCD1P59942 119 aaPredicted RBP3.93□□□□□ -1.78
CBWD3-209ENST00000614377 NFX1Q12986 1120 aaKnown RBP3.93□□□□□ -1.78
CBWD3-209ENST00000614377 CCDC96Q2M329 555 aa3.93□□□□□ -1.78
CBWD3-209ENST00000614377 NOP58Q9Y2X3 529 aaKnown RBP3.93□□□□□ -1.78
CBWD3-209ENST00000614377 HMCN1Q96RW7 5635 aa3.93□□□□□ -1.78
CBWD3-209ENST00000614377 SMARCA5O60264 1052 aaPredicted RBP3.93□□□□□ -1.78
CBWD3-209ENST00000614377 INSM1Q01101 510 aaPredicted RBP3.93□□□□□ -1.78
CBWD3-209ENST00000614377 FAM161AQ3B820 660 aa3.93□□□□□ -1.78
CBWD3-209ENST00000614377 PUS10Q3MIT2 529 aaKnown RBP3.93□□□□□ -1.78
CBWD3-209ENST00000614377 CDCA8Q53HL2 280 aa3.93□□□□□ -1.78
CBWD3-209ENST00000614377 CYP4X1Q8N118 509 aa3.93□□□□□ -1.78
CBWD3-209ENST00000614377 MKL1Q969V6 931 aa3.93□□□□□ -1.78
CBWD3-209ENST00000614377 TPD52L2O43399 206 aaKnown RBP3.93□□□□□ -1.78
CBWD3-209ENST00000614377 NR1I2O75469 434 aa3.93□□□□□ -1.78
CBWD3-209ENST00000614377 UBA5Q9GZZ9 404 aa3.93□□□□□ -1.78
CBWD3-209ENST00000614377 TMEM134Q9H6X4 195 aa3.92□□□□□ -1.78
CBWD3-209ENST00000614377 GEMIN8Q9NWZ8 242 aaKnown RBP3.92□□□□□ -1.78
CBWD3-209ENST00000614377 MARCH6O60337 910 aa3.92□□□□□ -1.78
CBWD3-209ENST00000614377 SEMA3FQ13275 785 aa3.92□□□□□ -1.78
CBWD3-209ENST00000614377 IRF5Q13568 498 aa3.92□□□□□ -1.78
CBWD3-209ENST00000614377 NBPF9Q3BBW0 867 aa3.92□□□□□ -1.78
CBWD3-209ENST00000614377 RETREG2Q8NC44 543 aa3.92□□□□□ -1.78
CBWD3-209ENST00000614377 TCERG1O14776 1098 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms