RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 BRWD3Q6RI45 1802 aa25.98■■□□□ 1.75
SMN2-213ENST00000614240 TRPM3Q9HCF6 1732 aaPredicted RBP25.97■■□□□ 1.75
SMN2-213ENST00000614240 PRDM11Q9NQV5 511 aa25.97■■□□□ 1.75
SMN2-213ENST00000614240 CDK19Q9BWU1 502 aa25.95■■□□□ 1.74
SMN2-213ENST00000614240 ALS2Q96Q42 1657 aa25.93■■□□□ 1.74
SMN2-213ENST00000614240 COL14A1Q05707 1796 aaKnown RBP25.92■■□□□ 1.74
SMN2-213ENST00000614240 BAG6P46379 1132 aa25.91■■□□□ 1.74
SMN2-213ENST00000614240 SPATA31A5Q5VU36 1347 aa25.9■■□□□ 1.74
SMN2-213ENST00000614240 SPATA31A7Q8IWB4 1347 aa25.9■■□□□ 1.74
SMN2-213ENST00000614240 NUTM2GQ5VZR2 741 aa25.9■■□□□ 1.74
SMN2-213ENST00000614240 ATP7BP35670 1465 aa25.9■■□□□ 1.74
SMN2-213ENST00000614240 EP400Q96L91 3159 aa25.9■■□□□ 1.74
SMN2-213ENST00000614240 ARHGEF28Q8N1W1 1705 aaKnown RBP25.89■■□□□ 1.74
SMN2-213ENST00000614240 NRAPQ86VF7 1730 aa25.88■■□□□ 1.73
SMN2-213ENST00000614240 CHRNA2Q15822 529 aa25.88■■□□□ 1.73
SMN2-213ENST00000614240 CCDC61Q9Y6R9 512 aa25.88■■□□□ 1.73
SMN2-213ENST00000614240 KIAA0232Q92628 1395 aa25.87■■□□□ 1.73
SMN2-213ENST00000614240 ZC3H6P61129 1189 aaKnown RBP25.87■■□□□ 1.73
SMN2-213ENST00000614240 STRN4Q9NRL3 753 aa25.87■■□□□ 1.73
SMN2-213ENST00000614240 ACEP12821 1306 aa25.87■■□□□ 1.73
SMN2-213ENST00000614240 ITSN1Q15811 1721 aa25.86■■□□□ 1.73
SMN2-213ENST00000614240 NBPF8Q3BBV2 869 aa25.86■■□□□ 1.73
SMN2-213ENST00000614240 FAM182BQ5T319 152 aa25.86■■□□□ 1.73
SMN2-213ENST00000614240 NBPF1Q3BBV0 1214 aa25.84■■□□□ 1.73
SMN2-213ENST00000614240 EVA1CP58658 441 aa25.83■■□□□ 1.73
SMN2-213ENST00000614240 SRPK2P78362 688 aaKnown RBP25.83■■□□□ 1.73
SMN2-213ENST00000614240 PLEKHG3A1L390 1219 aa25.82■■□□□ 1.72
SMN2-213ENST00000614240 ABTB2Q8N961 1025 aa25.82■■□□□ 1.72
SMN2-213ENST00000614240 SPATA31A1Q5TZJ5 1347 aa25.82■■□□□ 1.72
SMN2-213ENST00000614240 POLR3AO14802 1390 aaPredicted RBP25.82■■□□□ 1.72
SMN2-213ENST00000614240 USP35Q9P2H5 1018 aa25.8■■□□□ 1.72
SMN2-213ENST00000614240 CRYBG1Q9Y4K1 1723 aa25.8■■□□□ 1.72
SMN2-213ENST00000614240 PSDA5PKW4 1024 aaPredicted RBP25.79■■□□□ 1.72
SMN2-213ENST00000614240 EN1Q05925 392 aaPredicted RBP25.79■■□□□ 1.72
SMN2-213ENST00000614240 CENPJQ9HC77 1338 aaPredicted RBP25.78■■□□□ 1.72
SMN2-213ENST00000614240 KIAA1210Q9ULL0 1709 aa25.77■■□□□ 1.72
SMN2-213ENST00000614240 CABP2Q9NPB3 220 aa25.76■■□□□ 1.71
SMN2-213ENST00000614240 FAM196AQ6ZSG2 479 aa25.75■■□□□ 1.71
SMN2-213ENST00000614240 NLRP13Q86W25 1043 aa25.75■■□□□ 1.71
SMN2-213ENST00000614240 PHRF1Q9P1Y6 1649 aaKnown RBP25.74■■□□□ 1.71
SMN2-213ENST00000614240 PPIP5K1Q6PFW1 1433 aa25.73■■□□□ 1.71
SMN2-213ENST00000614240 TOPAZ1Q8N9V7 1692 aa25.73■■□□□ 1.71
SMN2-213ENST00000614240 THSD7AQ9UPZ6 1657 aa25.73■■□□□ 1.71
SMN2-213ENST00000614240 TRIM37O94972 964 aa25.72■■□□□ 1.71
SMN2-213ENST00000614240 PDE3BQ13370 1112 aa25.72■■□□□ 1.71
SMN2-213ENST00000614240 SSH2Q76I76 1423 aa25.71■■□□□ 1.71
SMN2-213ENST00000614240 LARP1Q6PKG0 1096 aaKnown RBP25.7■■□□□ 1.7
SMN2-213ENST00000614240 BARGINQ6ZT62 677 aa25.7■■□□□ 1.7
SMN2-213ENST00000614240 RGPD1P0DJD0 1748 aa25.7■■□□□ 1.7
SMN2-213ENST00000614240 USP19O94966 1318 aa25.69■■□□□ 1.7
SMN2-213ENST00000614240 ZBTB7CA1YPR0 619 aa25.69■■□□□ 1.7
SMN2-213ENST00000614240 GCP02774 474 aa25.69■■□□□ 1.7
SMN2-213ENST00000614240 TCP11L2Q8N4U5 519 aa25.69■■□□□ 1.7
SMN2-213ENST00000614240 SRCAPQ6ZRS2 3230 aa25.69■■□□□ 1.7
SMN2-213ENST00000614240 CPDO75976 1380 aa25.69■■□□□ 1.7
SMN2-213ENST00000614240 EZH2Q15910 746 aaKnown RBP25.68■■□□□ 1.7
SMN2-213ENST00000614240 L3MBTL2Q969R5 705 aa25.68■■□□□ 1.7
SMN2-213ENST00000614240 CABP1Q9NZU7 370 aa25.68■■□□□ 1.7
SMN2-213ENST00000614240 APBA3O96018 575 aa25.67■■□□□ 1.7
SMN2-213ENST00000614240 R3HDM1Q15032 1099 aaKnown RBP25.67■■□□□ 1.7
SMN2-213ENST00000614240 NRKQ7Z2Y5 1582 aa25.66■■□□□ 1.7
SMN2-213ENST00000614240 CAMTA1Q9Y6Y1 1673 aa25.65■■□□□ 1.7
SMN2-213ENST00000614240 DISP2A7MBM2 1401 aa25.65■■□□□ 1.7
SMN2-213ENST00000614240 NLRP6P59044 892 aa25.65■■□□□ 1.7
SMN2-213ENST00000614240 BRD4O60885 1362 aaPredicted RBP25.65■■□□□ 1.7
SMN2-213ENST00000614240 EVC2Q86UK5 1308 aa25.63■■□□□ 1.69
SMN2-213ENST00000614240 CAMKK2Q96RR4 588 aa25.63■■□□□ 1.69
SMN2-213ENST00000614240 THRAP3Q9Y2W1 955 aaKnown RBP25.63■■□□□ 1.69
SMN2-213ENST00000614240 NEUROD1Q13562 356 aa25.62■■□□□ 1.69
SMN2-213ENST00000614240 LRP5O75197 1615 aa25.62■■□□□ 1.69
SMN2-213ENST00000614240 SIN3AQ96ST3 1273 aa25.61■■□□□ 1.69
SMN2-213ENST00000614240 QRICH2Q9H0J4 1663 aa25.61■■□□□ 1.69
SMN2-213ENST00000614240 USP6P35125 1406 aa25.6■■□□□ 1.69
SMN2-213ENST00000614240 TNS1Q9HBL0 1735 aaKnown RBP25.59■■□□□ 1.69
SMN2-213ENST00000614240 LMO7Q8WWI1 1683 aa25.58■■□□□ 1.68
SMN2-213ENST00000614240 PARD3Q8TEW0 1356 aa25.57■■□□□ 1.68
SMN2-213ENST00000614240 ROCK2O75116 1388 aaKnown RBP25.56■■□□□ 1.68
SMN2-213ENST00000614240 COL5A2P05997 1499 aaPredicted RBP25.56■■□□□ 1.68
SMN2-213ENST00000614240 CRB1P82279 1406 aa25.55■■□□□ 1.68
SMN2-213ENST00000614240 TOM1L2Q6ZVM7 507 aa25.55■■□□□ 1.68
SMN2-213ENST00000614240 AATKQ6ZMQ8 1374 aa25.55■■□□□ 1.68
SMN2-213ENST00000614240 NBPF14Q5TI25 921 aa25.54■■□□□ 1.68
SMN2-213ENST00000614240 ZNF692Q9BU19 519 aaPredicted RBP25.54■■□□□ 1.68
SMN2-213ENST00000614240 C11orf95C9JLR9 678 aaPredicted RBP25.53■■□□□ 1.68
SMN2-213ENST00000614240 SOX12O15370 315 aa25.51■■□□□ 1.67
SMN2-213ENST00000614240 SLIT3O75094 1523 aa25.49■■□□□ 1.67
SMN2-213ENST00000614240 TTC21BQ7Z4L5 1316 aa25.49■■□□□ 1.67
SMN2-213ENST00000614240 DDB1Q16531 1140 aa25.49■■□□□ 1.67
SMN2-213ENST00000614240 KCNH5Q8NCM2 988 aa25.49■■□□□ 1.67
SMN2-213ENST00000614240 CSB-PGBD3P0DP91 1061 aa25.48■■□□□ 1.67
SMN2-213ENST00000614240 TRPM1Q7Z4N2 1603 aa25.48■■□□□ 1.67
SMN2-213ENST00000614240 AXIN2Q9Y2T1 843 aa25.47■■□□□ 1.67
SMN2-213ENST00000614240 OVOS2A0A0G2JMS6 1433 aa25.46■■□□□ 1.67
SMN2-213ENST00000614240 OVOS2A0A0J9YW53 1432 aa25.46■■□□□ 1.67
SMN2-213ENST00000614240 OVOS2Q6IE36 1432 aa25.46■■□□□ 1.67
SMN2-213ENST00000614240 WDR17Q8IZU2 1322 aa25.45■■□□□ 1.66
SMN2-213ENST00000614240 TTC21AQ8NDW8 1320 aa25.45■■□□□ 1.66
SMN2-213ENST00000614240 ARHGEF25Q86VW2 580 aa25.45■■□□□ 1.66
SMN2-213ENST00000614240 PARP4Q9UKK3 1724 aaKnown RBP25.44■■□□□ 1.66
SMN2-213ENST00000614240 CPSF1Q10570 1443 aaKnown RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms