RNA–Protein interactions for RNA: ENST00000613942.2

CRNDE-212, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 2,601 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-212ENST00000613942 SIRT1Q96EB6 747 aa8.05□□□□□ -1.12
CRNDE-212ENST00000613942 RBM33Q96EV2 1170 aaKnown RBP8.05□□□□□ -1.12
CRNDE-212ENST00000613942 HSPA2P54652 639 aa8.05□□□□□ -1.12
CRNDE-212ENST00000613942 KNDC1Q76NI1 1749 aa8.05□□□□□ -1.12
CRNDE-212ENST00000613942 A0A1W2PP64 1363 aa8.04□□□□□ -1.12
CRNDE-212ENST00000613942 ATAD2Q6PL18 1390 aa8.04□□□□□ -1.12
CRNDE-212ENST00000613942 NLRP13Q86W25 1043 aa8.04□□□□□ -1.12
CRNDE-212ENST00000613942 ANKRD36BQ8N2N9 1353 aa8.04□□□□□ -1.12
CRNDE-212ENST00000613942 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.03□□□□□ -1.12
CRNDE-212ENST00000613942 PRR36Q9H6K5 1346 aa8.03□□□□□ -1.12
CRNDE-212ENST00000613942 PPP2R1AP30153 589 aa8.03□□□□□ -1.12
CRNDE-212ENST00000613942 TNNT2P45379 298 aaPredicted RBP8.03□□□□□ -1.12
CRNDE-212ENST00000613942 CD163L1Q9NR16 1453 aa8.03□□□□□ -1.12
CRNDE-212ENST00000613942 NUDT16Q96DE0 195 aaKnown RBP8.03□□□□□ -1.12
CRNDE-212ENST00000613942 NPHP4O75161 1426 aaPredicted RBP8.03□□□□□ -1.12
CRNDE-212ENST00000613942 BRD4O60885 1362 aaPredicted RBP8.03□□□□□ -1.12
CRNDE-212ENST00000613942 DIP2AQ14689 1571 aa8.03□□□□□ -1.12
CRNDE-212ENST00000613942 ZNF692Q9BU19 519 aaPredicted RBP8.02□□□□□ -1.12
CRNDE-212ENST00000613942 NPC1L1Q9UHC9 1359 aa8.02□□□□□ -1.13
CRNDE-212ENST00000613942 TERF2IPQ9NYB0 399 aa8.01□□□□□ -1.13
CRNDE-212ENST00000613942 PODXL2Q9NZ53 605 aa8.01□□□□□ -1.13
CRNDE-212ENST00000613942 PTCH1Q13635 1447 aa8.01□□□□□ -1.13
CRNDE-212ENST00000613942 PPIP5K1Q6PFW1 1433 aa8.01□□□□□ -1.13
CRNDE-212ENST00000613942 GGNBP2Q9H3C7 697 aa8.01□□□□□ -1.13
CRNDE-212ENST00000613942 NINLQ9Y2I6 1382 aa8.01□□□□□ -1.13
CRNDE-212ENST00000613942 CGNL1Q0VF96 1302 aa8.01□□□□□ -1.13
CRNDE-212ENST00000613942 XRN1Q8IZH2 1706 aaKnown RBP8.01□□□□□ -1.13
CRNDE-212ENST00000613942 PRKAR2AP13861 404 aaKnown RBP8□□□□□ -1.13
CRNDE-212ENST00000613942 HDGFL2Q7Z4V5 671 aaPredicted RBP8□□□□□ -1.13
CRNDE-212ENST00000613942 MORC1Q86VD1 984 aa8□□□□□ -1.13
CRNDE-212ENST00000613942 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8□□□□□ -1.13
CRNDE-212ENST00000613942 CCDC61Q9Y6R9 512 aa8□□□□□ -1.13
CRNDE-212ENST00000613942 PIK3R4Q99570 1358 aa8□□□□□ -1.13
CRNDE-212ENST00000613942 ATP7BP35670 1465 aa8□□□□□ -1.13
CRNDE-212ENST00000613942 CDCA7LQ96GN5 454 aa8□□□□□ -1.13
CRNDE-212ENST00000613942 PPP4R2Q9NY27 417 aa8□□□□□ -1.13
CRNDE-212ENST00000613942 NUDCQ9Y266 331 aa8□□□□□ -1.13
CRNDE-212ENST00000613942 FYB1O15117 783 aa7.99□□□□□ -1.13
CRNDE-212ENST00000613942 CHADLQ6NUI6 762 aa7.99□□□□□ -1.13
CRNDE-212ENST00000613942 ADGRB2O60241 1585 aa7.99□□□□□ -1.13
CRNDE-212ENST00000613942 ERICH6BQ5W0A0 696 aa7.99□□□□□ -1.13
CRNDE-212ENST00000613942 PMFBP1Q8TBY8 1022 aa7.99□□□□□ -1.13
CRNDE-212ENST00000613942 SSUH2Q9Y2M2 353 aa7.99□□□□□ -1.13
CRNDE-212ENST00000613942 CHD2O14647 1828 aaKnown RBP7.98□□□□□ -1.13
CRNDE-212ENST00000613942 FBLN1P23142 703 aa7.98□□□□□ -1.13
CRNDE-212ENST00000613942 CPSF1Q10570 1443 aaKnown RBP7.98□□□□□ -1.13
CRNDE-212ENST00000613942 ZRANB1Q9UGI0 708 aa7.98□□□□□ -1.13
CRNDE-212ENST00000613942 SMG6Q86US8 1419 aaKnown RBP7.97□□□□□ -1.13
CRNDE-212ENST00000613942 NME9Q86XW9 330 aa7.97□□□□□ -1.13
CRNDE-212ENST00000613942 ADAMTS8Q9UP79 889 aa7.97□□□□□ -1.13
CRNDE-212ENST00000613942 ACEP12821 1306 aa7.97□□□□□ -1.13
CRNDE-212ENST00000613942 NKTRP30414 1462 aaKnown RBP7.97□□□□□ -1.13
CRNDE-212ENST00000613942 LMTK3Q96Q04 1460 aa7.97□□□□□ -1.13
CRNDE-212ENST00000613942 USP32Q8NFA0 1604 aa7.97□□□□□ -1.13
CRNDE-212ENST00000613942 MTHFSP49914 203 aa7.97□□□□□ -1.13
CRNDE-212ENST00000613942 C14orf37Q86TY3 774 aa7.96□□□□□ -1.14
CRNDE-212ENST00000613942 PLEKHG3A1L390 1219 aa7.96□□□□□ -1.14
CRNDE-212ENST00000613942 PLIN1O60240 522 aa7.96□□□□□ -1.14
CRNDE-212ENST00000613942 CDC42BPGQ6DT37 1551 aa7.95□□□□□ -1.14
CRNDE-212ENST00000613942 NSD2O96028 1365 aa7.95□□□□□ -1.14
CRNDE-212ENST00000613942 PROSER2Q86WR7 435 aaPredicted RBP7.95□□□□□ -1.14
CRNDE-212ENST00000613942 EDC4Q6P2E9 1401 aaKnown RBP7.95□□□□□ -1.14
CRNDE-212ENST00000613942 WDR43Q15061 677 aaKnown RBP eCLIP7.95□□□□□ -1.14
CRNDE-212ENST00000613942 CCDC136Q96JN2 1154 aa7.95□□□□□ -1.14
CRNDE-212ENST00000613942 NALCNQ8IZF0 1738 aa7.94□□□□□ -1.14
CRNDE-212ENST00000613942 RGPD8O14715 1765 aaPredicted RBP7.94□□□□□ -1.14
CRNDE-212ENST00000613942 SPDYE1Q8NFV5 336 aaPredicted RBP7.94□□□□□ -1.14
CRNDE-212ENST00000613942 TOPAZ1Q8N9V7 1692 aa7.94□□□□□ -1.14
CRNDE-212ENST00000613942 PLEKHG5O94827 1062 aa7.94□□□□□ -1.14
CRNDE-212ENST00000613942 SKAP1Q86WV1 359 aa7.94□□□□□ -1.14
CRNDE-212ENST00000613942 NGDNQ8NEJ9 315 aaKnown RBP7.94□□□□□ -1.14
CRNDE-212ENST00000613942 EXOC6Q8TAG9 804 aa7.94□□□□□ -1.14
CRNDE-212ENST00000613942 PKNOX2Q96KN3 472 aa7.94□□□□□ -1.14
CRNDE-212ENST00000613942 CCDC146Q8IYE0 955 aa7.93□□□□□ -1.14
CRNDE-212ENST00000613942 TTC21BQ7Z4L5 1316 aa7.93□□□□□ -1.14
CRNDE-212ENST00000613942 ADGRL3Q9HAR2 1447 aa7.93□□□□□ -1.14
CRNDE-212ENST00000613942 POLR3AO14802 1390 aaPredicted RBP7.93□□□□□ -1.14
CRNDE-212ENST00000613942 USP6P35125 1406 aa7.93□□□□□ -1.14
CRNDE-212ENST00000613942 NWD1Q149M9 1564 aa7.92□□□□□ -1.14
CRNDE-212ENST00000613942 PPM1GO15355 546 aaPredicted RBP7.92□□□□□ -1.14
CRNDE-212ENST00000613942 AKAP12Q02952 1782 aa7.92□□□□□ -1.14
CRNDE-212ENST00000613942 MON2Q7Z3U7 1717 aa7.92□□□□□ -1.14
CRNDE-212ENST00000613942 TMEM94Q12767 1356 aa7.92□□□□□ -1.14
CRNDE-212ENST00000613942 RNF123Q5XPI4 1314 aa7.92□□□□□ -1.14
CRNDE-212ENST00000613942 ESCO1Q5FWF5 840 aa7.92□□□□□ -1.14
CRNDE-212ENST00000613942 ORAI2Q96SN7 254 aa7.92□□□□□ -1.14
CRNDE-212ENST00000613942 RCAN3Q9UKA8 241 aa7.92□□□□□ -1.14
CRNDE-212ENST00000613942 KIF20BQ96Q89 1820 aa7.92□□□□□ -1.14
CRNDE-212ENST00000613942 STRCP1A6NGW2 1772 aa7.92□□□□□ -1.14
CRNDE-212ENST00000613942 STRCQ7RTU9 1775 aa7.92□□□□□ -1.14
CRNDE-212ENST00000613942 ITSN1Q15811 1721 aa7.92□□□□□ -1.14
CRNDE-212ENST00000613942 FMN2Q9NZ56 1722 aa7.92□□□□□ -1.14
CRNDE-212ENST00000613942 BLMP54132 1417 aaPredicted RBP7.91□□□□□ -1.14
CRNDE-212ENST00000613942 ANKARQ7Z5J8 1434 aa7.91□□□□□ -1.14
CRNDE-212ENST00000613942 SOX12O15370 315 aa7.91□□□□□ -1.14
CRNDE-212ENST00000613942 RRS1Q15050 365 aaKnown RBP7.91□□□□□ -1.14
CRNDE-212ENST00000613942 COG3Q96JB2 828 aa7.91□□□□□ -1.14
CRNDE-212ENST00000613942 POLKQ9UBT6 870 aa7.91□□□□□ -1.14
CRNDE-212ENST00000613942 EMILIN1Q9Y6C2 1016 aa7.91□□□□□ -1.14
CRNDE-212ENST00000613942 ZNF335Q9H4Z2 1342 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms