RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 SLAIN2Q9P270 581 aa18.64■□□□□ 0.57
TMEM254-213ENST00000613758 FOXO3O43524 673 aa18.64■□□□□ 0.57
TMEM254-213ENST00000613758 SSH2Q76I76 1423 aa18.64■□□□□ 0.57
TMEM254-213ENST00000613758 NME9Q86XW9 330 aa18.64■□□□□ 0.57
TMEM254-213ENST00000613758 CENPBP07199 599 aaPredicted RBP18.63■□□□□ 0.57
TMEM254-213ENST00000613758 CCDC184Q52MB2 194 aa18.63■□□□□ 0.57
TMEM254-213ENST00000613758 PPP2R1AP30153 589 aa18.62■□□□□ 0.57
TMEM254-213ENST00000613758 TTC21AQ8NDW8 1320 aa18.61■□□□□ 0.57
TMEM254-213ENST00000613758 NLRP13Q86W25 1043 aa18.61■□□□□ 0.57
TMEM254-213ENST00000613758 TNNT2P45379 298 aaPredicted RBP18.61■□□□□ 0.57
TMEM254-213ENST00000613758 MRS2Q9HD23 443 aa18.61■□□□□ 0.57
TMEM254-213ENST00000613758 ZRANB1Q9UGI0 708 aa18.61■□□□□ 0.57
TMEM254-213ENST00000613758 NRKQ7Z2Y5 1582 aa18.6■□□□□ 0.57
TMEM254-213ENST00000613758 BRD4O60885 1362 aaPredicted RBP18.6■□□□□ 0.57
TMEM254-213ENST00000613758 PAK3O75914 559 aaPredicted RBP18.59■□□□□ 0.57
TMEM254-213ENST00000613758 KIF1AQ12756 1690 aa18.59■□□□□ 0.57
TMEM254-213ENST00000613758 KIF20BQ96Q89 1820 aa18.59■□□□□ 0.57
TMEM254-213ENST00000613758 BRINP3Q76B58 766 aa18.59■□□□□ 0.57
TMEM254-213ENST00000613758 COG3Q96JB2 828 aa18.59■□□□□ 0.57
TMEM254-213ENST00000613758 KRT28Q7Z3Y7 464 aa18.58■□□□□ 0.57
TMEM254-213ENST00000613758 XPCQ01831 940 aaPredicted RBP18.58■□□□□ 0.56
TMEM254-213ENST00000613758 ANKRD26Q9UPS8 1709 aa18.56■□□□□ 0.56
TMEM254-213ENST00000613758 ABTB2Q8N961 1025 aa18.55■□□□□ 0.56
TMEM254-213ENST00000613758 DDX17Q92841 729 aaKnown RBP18.55■□□□□ 0.56
TMEM254-213ENST00000613758 NPHP3Q7Z494 1330 aa18.55■□□□□ 0.56
TMEM254-213ENST00000613758 NLRP6P59044 892 aa18.54■□□□□ 0.56
TMEM254-213ENST00000613758 USP31Q70CQ4 1352 aa18.54■□□□□ 0.56
TMEM254-213ENST00000613758 SCAF1Q9H7N4 1312 aaKnown RBP18.53■□□□□ 0.56
TMEM254-213ENST00000613758 OVOS2A0A0J9YW53 1432 aa18.53■□□□□ 0.56
TMEM254-213ENST00000613758 OVOS2Q6IE36 1432 aa18.53■□□□□ 0.56
TMEM254-213ENST00000613758 NUTM2GQ5VZR2 741 aa18.52■□□□□ 0.56
TMEM254-213ENST00000613758 MTHFSP49914 203 aa18.52■□□□□ 0.56
TMEM254-213ENST00000613758 FBLN1P23142 703 aa18.51■□□□□ 0.55
TMEM254-213ENST00000613758 PIK3C2AO00443 1686 aa18.5■□□□□ 0.55
TMEM254-213ENST00000613758 PNISRQ8TF01 805 aaKnown RBP18.5■□□□□ 0.55
TMEM254-213ENST00000613758 LMOD2Q6P5Q4 547 aa18.49■□□□□ 0.55
TMEM254-213ENST00000613758 FAM9BQ8IZU0 186 aa18.49■□□□□ 0.55
TMEM254-213ENST00000613758 SBNO1A3KN83 1393 aa18.49■□□□□ 0.55
TMEM254-213ENST00000613758 AATKQ6ZMQ8 1374 aa18.49■□□□□ 0.55
TMEM254-213ENST00000613758 TRPM3Q9HCF6 1732 aaPredicted RBP18.48■□□□□ 0.55
TMEM254-213ENST00000613758 TOM1O60784 492 aa18.48■□□□□ 0.55
TMEM254-213ENST00000613758 POLKQ9UBT6 870 aa18.48■□□□□ 0.55
TMEM254-213ENST00000613758 PXDNQ92626 1479 aa18.48■□□□□ 0.55
TMEM254-213ENST00000613758 SOX12O15370 315 aa18.47■□□□□ 0.55
TMEM254-213ENST00000613758 CFAP53Q96M91 514 aa18.47■□□□□ 0.55
TMEM254-213ENST00000613758 SOS2Q07890 1332 aaPredicted RBP18.46■□□□□ 0.55
TMEM254-213ENST00000613758 CERKQ8TCT0 537 aa18.46■□□□□ 0.55
TMEM254-213ENST00000613758 RRS1Q15050 365 aaKnown RBP18.45■□□□□ 0.54
TMEM254-213ENST00000613758 SPATA31A3Q5VYP0 1347 aa18.45■□□□□ 0.54
TMEM254-213ENST00000613758 EMILIN1Q9Y6C2 1016 aa18.45■□□□□ 0.54
TMEM254-213ENST00000613758 IQSEC2Q5JU85 1478 aa18.44■□□□□ 0.54
TMEM254-213ENST00000613758 UBAP1LF5GYI3 381 aa18.44■□□□□ 0.54
TMEM254-213ENST00000613758 PPM1GO15355 546 aaPredicted RBP18.44■□□□□ 0.54
TMEM254-213ENST00000613758 USP54Q70EL1 1684 aa18.44■□□□□ 0.54
TMEM254-213ENST00000613758 TNS3Q68CZ2 1445 aa18.44■□□□□ 0.54
TMEM254-213ENST00000613758 MAP2P11137 1827 aaKnown RBP18.43■□□□□ 0.54
TMEM254-213ENST00000613758 ROBO1Q9Y6N7 1651 aa18.42■□□□□ 0.54
TMEM254-213ENST00000613758 MARF1Q9Y4F3 1742 aaKnown RBP18.42■□□□□ 0.54
TMEM254-213ENST00000613758 ALS2Q96Q42 1657 aa18.42■□□□□ 0.54
TMEM254-213ENST00000613758 PLEKHG5O94827 1062 aa18.42■□□□□ 0.54
TMEM254-213ENST00000613758 PIP4K2BP78356 416 aa18.42■□□□□ 0.54
TMEM254-213ENST00000613758 KCNH5Q8NCM2 988 aa18.42■□□□□ 0.54
TMEM254-213ENST00000613758 NHSL1Q5SYE7 1610 aa18.41■□□□□ 0.54
TMEM254-213ENST00000613758 WDR43Q15061 677 aaKnown RBP eCLIP18.41■□□□□ 0.54
TMEM254-213ENST00000613758 USP19O94966 1318 aa18.41■□□□□ 0.54
TMEM254-213ENST00000613758 ARHGEF10O15013 1369 aa18.41■□□□□ 0.54
TMEM254-213ENST00000613758 PNPLA6Q8IY17 1366 aa18.41■□□□□ 0.54
TMEM254-213ENST00000613758 SMG6Q86US8 1419 aaKnown RBP18.4■□□□□ 0.54
TMEM254-213ENST00000613758 GCP02774 474 aa18.4■□□□□ 0.54
TMEM254-213ENST00000613758 MAP3K19Q56UN5 1328 aa18.4■□□□□ 0.54
TMEM254-213ENST00000613758 INSRP06213 1382 aa18.39■□□□□ 0.54
TMEM254-213ENST00000613758 ADAMTS8Q9UP79 889 aa18.38■□□□□ 0.53
TMEM254-213ENST00000613758 DIAPH1O60610 1272 aaKnown RBP18.37■□□□□ 0.53
TMEM254-213ENST00000613758 AMPHP49418 695 aa18.37■□□□□ 0.53
TMEM254-213ENST00000613758 SLIT3O75094 1523 aa18.37■□□□□ 0.53
TMEM254-213ENST00000613758 CDK12Q9NYV4 1490 aaPredicted RBP18.37■□□□□ 0.53
TMEM254-213ENST00000613758 LRRC59Q96AG4 307 aaKnown RBP18.37■□□□□ 0.53
TMEM254-213ENST00000613758 NUDCQ9Y266 331 aa18.37■□□□□ 0.53
TMEM254-213ENST00000613758 AHDC1Q5TGY3 1603 aaPredicted RBP18.37■□□□□ 0.53
TMEM254-213ENST00000613758 COL3A1P02461 1466 aaPredicted RBP18.36■□□□□ 0.53
TMEM254-213ENST00000613758 CABLES1Q8TDN4 633 aa18.36■□□□□ 0.53
TMEM254-213ENST00000613758 NFAT5O94916 1531 aa18.36■□□□□ 0.53
TMEM254-213ENST00000613758 MED1Q15648 1581 aaPredicted RBP18.36■□□□□ 0.53
TMEM254-213ENST00000613758 HSP90AB2PQ58FF8 381 aa18.34■□□□□ 0.53
TMEM254-213ENST00000613758 FLT4P35916 1363 aa18.34■□□□□ 0.53
TMEM254-213ENST00000613758 KIF24Q5T7B8 1368 aa18.33■□□□□ 0.53
TMEM254-213ENST00000613758 PEAK1Q9H792 1746 aa18.33■□□□□ 0.53
TMEM254-213ENST00000613758 ZBTB7CA1YPR0 619 aa18.33■□□□□ 0.52
TMEM254-213ENST00000613758 U2SURPO15042 1029 aaKnown RBP18.33■□□□□ 0.52
TMEM254-213ENST00000613758 ARHGEF25Q86VW2 580 aa18.33■□□□□ 0.52
TMEM254-213ENST00000613758 SHPRHQ149N8 1683 aa18.33■□□□□ 0.52
TMEM254-213ENST00000613758 U2AF1L5P0DN76 240 aaPredicted RBP18.32■□□□□ 0.52
TMEM254-213ENST00000613758 HOXC9P31274 260 aa18.32■□□□□ 0.52
TMEM254-213ENST00000613758 IL13P35225 146 aa18.32■□□□□ 0.52
TMEM254-213ENST00000613758 HNRNPUQ00839 825 aaKnown RBP eCLIP18.32■□□□□ 0.52
TMEM254-213ENST00000613758 U2AF1Q01081 240 aaKnown RBP eCLIP18.32■□□□□ 0.52
TMEM254-213ENST00000613758 ZC3H6P61129 1189 aaKnown RBP18.32■□□□□ 0.52
TMEM254-213ENST00000613758 IP6K1Q92551 441 aa18.31■□□□□ 0.52
TMEM254-213ENST00000613758 EIF4A2Q14240 407 aaKnown RBP18.31■□□□□ 0.52
TMEM254-213ENST00000613758 RTL1A6NKG5 1358 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms