RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 ANKRD1Q15327 319 aa20.8■□□□□ 0.92
HMGXB3-206ENST00000613459 JMYQ8N9B5 988 aa20.8■□□□□ 0.92
HMGXB3-206ENST00000613459 FBXW7Q969H0 707 aa20.8■□□□□ 0.92
HMGXB3-206ENST00000613459 PLEKHH2Q8IVE3 1493 aa20.8■□□□□ 0.92
HMGXB3-206ENST00000613459 TXLNAP40222 546 aa20.8■□□□□ 0.92
HMGXB3-206ENST00000613459 SMG6Q86US8 1419 aaKnown RBP20.8■□□□□ 0.92
HMGXB3-206ENST00000613459 HMOX1P09601 288 aa20.8■□□□□ 0.92
HMGXB3-206ENST00000613459 PNISRQ8TF01 805 aaKnown RBP20.8■□□□□ 0.92
HMGXB3-206ENST00000613459 PLEKHO1Q53GL0 409 aaPredicted RBP20.8■□□□□ 0.92
HMGXB3-206ENST00000613459 TCP11L2Q8N4U5 519 aa20.8■□□□□ 0.92
HMGXB3-206ENST00000613459 GPRASP1Q5JY77 1395 aa20.79■□□□□ 0.92
HMGXB3-206ENST00000613459 ADAMTS8Q9UP79 889 aa20.79■□□□□ 0.92
HMGXB3-206ENST00000613459 PPP2R1AP30153 589 aa20.79■□□□□ 0.92
HMGXB3-206ENST00000613459 OSCARQ8IYS5 282 aa20.79■□□□□ 0.92
HMGXB3-206ENST00000613459 PDILTQ8N807 584 aa20.79■□□□□ 0.92
HMGXB3-206ENST00000613459 GGNBP2Q9H3C7 697 aa20.79■□□□□ 0.92
HMGXB3-206ENST00000613459 ATF3P18847 181 aa20.78■□□□□ 0.92
HMGXB3-206ENST00000613459 H0YHG0 523 aa20.78■□□□□ 0.92
HMGXB3-206ENST00000613459 TXLNBQ8N3L3 684 aa20.78■□□□□ 0.92
HMGXB3-206ENST00000613459 GNAI2P04899 355 aa20.78■□□□□ 0.92
HMGXB3-206ENST00000613459 TRIM5Q9C035 493 aa20.78■□□□□ 0.92
HMGXB3-206ENST00000613459 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.77■□□□□ 0.92
HMGXB3-206ENST00000613459 MTHFSP49914 203 aa20.77■□□□□ 0.92
HMGXB3-206ENST00000613459 CCT4P50991 539 aaKnown RBP20.77■□□□□ 0.92
HMGXB3-206ENST00000613459 CAVIN1Q6NZI2 390 aaKnown RBP20.77■□□□□ 0.92
HMGXB3-206ENST00000613459 DACH1Q9UI36 760 aa20.76■□□□□ 0.91
HMGXB3-206ENST00000613459 SURF6O75683 361 aaKnown RBP20.76■□□□□ 0.91
HMGXB3-206ENST00000613459 LEKR1Q6ZMV7 388 aa20.76■□□□□ 0.91
HMGXB3-206ENST00000613459 WDR63Q8IWG1 891 aa20.76■□□□□ 0.91
HMGXB3-206ENST00000613459 MAGEC2Q9UBF1 373 aaPredicted RBP20.76■□□□□ 0.91
HMGXB3-206ENST00000613459 PDZRN3Q9UPQ7 1066 aa20.75■□□□□ 0.91
HMGXB3-206ENST00000613459 SRCIN1Q9C0H9 1055 aa20.75■□□□□ 0.91
HMGXB3-206ENST00000613459 SYTL4Q96C24 671 aaPredicted RBP20.75■□□□□ 0.91
HMGXB3-206ENST00000613459 EFCAB5A4FU69 1503 aa20.74■□□□□ 0.91
HMGXB3-206ENST00000613459 RNF214Q8ND24 703 aa20.74■□□□□ 0.91
HMGXB3-206ENST00000613459 ARHGAP5Q13017 1502 aa20.74■□□□□ 0.91
HMGXB3-206ENST00000613459 ZNF428Q96B54 188 aa20.74■□□□□ 0.91
HMGXB3-206ENST00000613459 NEK4P51957 841 aa20.74■□□□□ 0.91
HMGXB3-206ENST00000613459 FOSBP53539 338 aa20.74■□□□□ 0.91
HMGXB3-206ENST00000613459 TWISTNBQ3B726 338 aaPredicted RBP20.74■□□□□ 0.91
HMGXB3-206ENST00000613459 CABP2Q9NPB3 220 aa20.73■□□□□ 0.91
HMGXB3-206ENST00000613459 NLRP2Q9NX02 1062 aa20.73■□□□□ 0.91
HMGXB3-206ENST00000613459 PRDM2Q13029 1718 aa20.73■□□□□ 0.91
HMGXB3-206ENST00000613459 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.73■□□□□ 0.914e-7■■□□□ 14.5
HMGXB3-206ENST00000613459 LUC7LQ9NQ29 371 aaKnown RBP20.73■□□□□ 0.91
HMGXB3-206ENST00000613459 KIF6Q6ZMV9 814 aa20.73■□□□□ 0.91
HMGXB3-206ENST00000613459 WDR33Q9C0J8 1336 aaKnown RBP20.73■□□□□ 0.91
HMGXB3-206ENST00000613459 CIZ1Q9ULV3 898 aaPredicted RBP20.72■□□□□ 0.91
HMGXB3-206ENST00000613459 SYNJ2O15056 1496 aa20.72■□□□□ 0.91
HMGXB3-206ENST00000613459 SMC2O95347 1197 aa20.72■□□□□ 0.91
HMGXB3-206ENST00000613459 NLRP6P59044 892 aa20.72■□□□□ 0.91
HMGXB3-206ENST00000613459 CCDC27Q2M243 656 aa20.72■□□□□ 0.91
HMGXB3-206ENST00000613459 EHBP1L1Q8N3D4 1523 aa20.72■□□□□ 0.91
HMGXB3-206ENST00000613459 AIMP1Q12904 312 aaKnown RBP20.72■□□□□ 0.91
HMGXB3-206ENST00000613459 RRP9O43818 475 aaKnown RBP20.71■□□□□ 0.91
HMGXB3-206ENST00000613459 ZNF692Q9BU19 519 aaPredicted RBP20.71■□□□□ 0.91
HMGXB3-206ENST00000613459 HSP90AB2PQ58FF8 381 aa20.71■□□□□ 0.91
HMGXB3-206ENST00000613459 GNL3LQ9NVN8 582 aaKnown RBP20.71■□□□□ 0.91
HMGXB3-206ENST00000613459 STK38Q15208 465 aa20.71■□□□□ 0.91
HMGXB3-206ENST00000613459 CYP46A1Q9Y6A2 500 aa20.71■□□□□ 0.91
HMGXB3-206ENST00000613459 CCDC192P0DO97 292 aa20.7■□□□□ 0.9
HMGXB3-206ENST00000613459 KIAA1107Q9UPP5 1409 aa20.7■□□□□ 0.9
HMGXB3-206ENST00000613459 EXOSC9Q06265 439 aaKnown RBP20.7■□□□□ 0.9
HMGXB3-206ENST00000613459 CCDC158Q5M9N0 1113 aa20.7■□□□□ 0.9
HMGXB3-206ENST00000613459 CDK5RAP3Q96JB5 506 aa20.7■□□□□ 0.9
HMGXB3-206ENST00000613459 PRPF40AO75400 957 aaKnown RBP20.7■□□□□ 0.9
HMGXB3-206ENST00000613459 PRKAR2BP31323 418 aa20.7■□□□□ 0.9
HMGXB3-206ENST00000613459 ZNHIT6Q9NWK9 470 aaKnown RBP20.69■□□□□ 0.9
HMGXB3-206ENST00000613459 ZSCAN25Q6NSZ9 544 aa20.68■□□□□ 0.9
HMGXB3-206ENST00000613459 NCAPD3P42695 1498 aa20.68■□□□□ 0.9
HMGXB3-206ENST00000613459 CBFA2T2O43439 604 aa20.68■□□□□ 0.9
HMGXB3-206ENST00000613459 ZSCAN31Q96LW9 406 aaPredicted RBP20.68■□□□□ 0.9
HMGXB3-206ENST00000613459 CCAR1Q8IX12 1150 aaKnown RBP20.67■□□□□ 0.9
HMGXB3-206ENST00000613459 ERLIN2O94905 339 aa20.67■□□□□ 0.9
HMGXB3-206ENST00000613459 LRRCC1Q9C099 1032 aa20.67■□□□□ 0.9
HMGXB3-206ENST00000613459 STIM1Q13586 685 aa20.67■□□□□ 0.9
HMGXB3-206ENST00000613459 GRIN2BQ13224 1484 aa20.66■□□□□ 0.9
HMGXB3-206ENST00000613459 K7ELQ4 463 aaPredicted RBP20.66■□□□□ 0.9
HMGXB3-206ENST00000613459 CYB5RLQ6IPT4 315 aa20.66■□□□□ 0.9
HMGXB3-206ENST00000613459 TRIM22Q8IYM9 498 aa20.66■□□□□ 0.9
HMGXB3-206ENST00000613459 NACAP1Q9BZK3 213 aa20.66■□□□□ 0.9
HMGXB3-206ENST00000613459 MEX3CQ5U5Q3 659 aaKnown RBP20.66■□□□□ 0.9
HMGXB3-206ENST00000613459 KRT85P78386 507 aa20.65■□□□□ 0.9
HMGXB3-206ENST00000613459 TTC39AQ5SRH9 613 aa20.65■□□□□ 0.9
HMGXB3-206ENST00000613459 DNAJC2Q99543 621 aaKnown RBP20.65■□□□□ 0.9
HMGXB3-206ENST00000613459 AQRO60306 1485 aaKnown RBP eCLIP20.65■□□□□ 0.96e-7■■■■■ 36.5
HMGXB3-206ENST00000613459 RPGRIP1LQ68CZ1 1315 aa20.65■□□□□ 0.9
HMGXB3-206ENST00000613459 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.65■□□□□ 0.92e-7■■■■■ 65
HMGXB3-206ENST00000613459 CDKL5O76039 1030 aa20.64■□□□□ 0.9
HMGXB3-206ENST00000613459 SYCP1Q15431 976 aa20.64■□□□□ 0.89
HMGXB3-206ENST00000613459 ARAP1Q96P48 1450 aa20.64■□□□□ 0.89
HMGXB3-206ENST00000613459 NOB1Q9ULX3 412 aaKnown RBP20.64■□□□□ 0.89
HMGXB3-206ENST00000613459 GRPEL1Q9HAV7 217 aa20.63■□□□□ 0.89
HMGXB3-206ENST00000613459 TATP17735 454 aaPredicted RBP20.63■□□□□ 0.89
HMGXB3-206ENST00000613459 BACH2Q9BYV9 841 aa20.63■□□□□ 0.89
HMGXB3-206ENST00000613459 KRT32Q14532 448 aa20.63■□□□□ 0.89
HMGXB3-206ENST00000613459 FYB1O15117 783 aa20.62■□□□□ 0.89
HMGXB3-206ENST00000613459 CNKSR2Q8WXI2 1034 aa20.62■□□□□ 0.89
HMGXB3-206ENST00000613459 MVPQ14764 893 aaKnown RBP20.62■□□□□ 0.89
HMGXB3-206ENST00000613459 AXDND1Q5T1B0 1012 aaPredicted RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms