RNA–Protein interactions for RNA: ENST00000612624.4

SMIM11B-201, Transcript of small integral membrane protein 11B, humanhuman

TSL 1 (best) BASIC

Gene SMIM11B, Length 1,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-201ENST00000612624 PPLO60437 1756 aa11.7□□□□□ -0.54
SMIM11B-201ENST00000612624 SENP3-EIF4A1A0A087X0R7 540 aa11.7□□□□□ -0.54
SMIM11B-201ENST00000612624 UNC5CLQ8IV45 518 aa11.7□□□□□ -0.54
SMIM11B-201ENST00000612624 SLIT2O94813 1529 aa11.7□□□□□ -0.54
SMIM11B-201ENST00000612624 C1orf167Q5SNV9 1468 aa11.7□□□□□ -0.54
SMIM11B-201ENST00000612624 GLI3P10071 1580 aa11.69□□□□□ -0.54
SMIM11B-201ENST00000612624 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.69□□□□□ -0.54
SMIM11B-201ENST00000612624 NINLQ9Y2I6 1382 aa11.68□□□□□ -0.54
SMIM11B-201ENST00000612624 ANKRD30BQ9BXX2 1392 aa11.67□□□□□ -0.54
SMIM11B-201ENST00000612624 XRN1Q8IZH2 1706 aaKnown RBP11.67□□□□□ -0.54
SMIM11B-201ENST00000612624 VGFO15240 615 aaPredicted RBP11.67□□□□□ -0.54
SMIM11B-201ENST00000612624 C1QTNF8P60827 252 aa11.67□□□□□ -0.54
SMIM11B-201ENST00000612624 R3HDM1Q15032 1099 aaKnown RBP11.67□□□□□ -0.54
SMIM11B-201ENST00000612624 SEPT12Q8IYM1 358 aa11.67□□□□□ -0.54
SMIM11B-201ENST00000612624 ZNF784Q8NCA9 323 aaPredicted RBP11.67□□□□□ -0.54
SMIM11B-201ENST00000612624 CHADLQ6NUI6 762 aa11.66□□□□□ -0.54
SMIM11B-201ENST00000612624 POTEHQ6S545 545 aa11.66□□□□□ -0.54
SMIM11B-201ENST00000612624 KRT27Q7Z3Y8 459 aa11.66□□□□□ -0.54
SMIM11B-201ENST00000612624 TSHZ2Q9NRE2 1034 aa11.66□□□□□ -0.54
SMIM11B-201ENST00000612624 NEXMIFQ5QGS0 1516 aa11.65□□□□□ -0.54
SMIM11B-201ENST00000612624 NRXN3Q9Y4C0 1643 aa11.64□□□□□ -0.55
SMIM11B-201ENST00000612624 PYGBP11216 843 aa11.64□□□□□ -0.55
SMIM11B-201ENST00000612624 VPS72Q15906 364 aa11.64□□□□□ -0.55
SMIM11B-201ENST00000612624 SPATA31E1Q6ZUB1 1445 aa11.63□□□□□ -0.55
SMIM11B-201ENST00000612624 CHRDL2Q6WN34 429 aa11.63□□□□□ -0.55
SMIM11B-201ENST00000612624 PARD3Q8TEW0 1356 aa11.63□□□□□ -0.55
SMIM11B-201ENST00000612624 STK25O00506 426 aa11.62□□□□□ -0.55
SMIM11B-201ENST00000612624 NKX1-1Q15270 411 aaPredicted RBP11.62□□□□□ -0.55
SMIM11B-201ENST00000612624 NPHP3Q7Z494 1330 aa11.61□□□□□ -0.55
SMIM11B-201ENST00000612624 CCDC144AA2RUR9 1427 aa11.61□□□□□ -0.55
SMIM11B-201ENST00000612624 EN1Q05925 392 aaPredicted RBP11.61□□□□□ -0.55
SMIM11B-201ENST00000612624 SGIP1Q9BQI5 828 aa11.61□□□□□ -0.55
SMIM11B-201ENST00000612624 ORAI2Q96SN7 254 aa11.6□□□□□ -0.55
SMIM11B-201ENST00000612624 FARP1Q9Y4F1 1045 aaPredicted RBP11.6□□□□□ -0.55
SMIM11B-201ENST00000612624 PRAG1Q86YV5 1406 aa11.6□□□□□ -0.55
SMIM11B-201ENST00000612624 ACIN1Q9UKV3 1341 aaKnown RBP11.6□□□□□ -0.55
SMIM11B-201ENST00000612624 PXDNQ92626 1479 aa11.59□□□□□ -0.55
SMIM11B-201ENST00000612624 SIN3AQ96ST3 1273 aa11.59□□□□□ -0.55
SMIM11B-201ENST00000612624 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.58□□□□□ -0.56
SMIM11B-201ENST00000612624 ZFP91Q96JP5 570 aaPredicted RBP11.58□□□□□ -0.56
SMIM11B-201ENST00000612624 CAMKK2Q96RR4 588 aa11.58□□□□□ -0.56
SMIM11B-201ENST00000612624 UTRNP46939 3433 aa11.57□□□□□ -0.56
SMIM11B-201ENST00000612624 METP08581 1390 aa11.57□□□□□ -0.56
SMIM11B-201ENST00000612624 SPON1Q9HCB6 807 aa11.57□□□□□ -0.56
SMIM11B-201ENST00000612624 BRWD3Q6RI45 1802 aa11.57□□□□□ -0.56
SMIM11B-201ENST00000612624 MARF1Q9Y4F3 1742 aaKnown RBP11.57□□□□□ -0.56
SMIM11B-201ENST00000612624 CEP350Q5VT06 3117 aa11.57□□□□□ -0.56
SMIM11B-201ENST00000612624 TSPYL2Q9H2G4 693 aaPredicted RBP11.56□□□□□ -0.56
SMIM11B-201ENST00000612624 LRPPRCP42704 1394 aaKnown RBP11.55□□□□□ -0.56
SMIM11B-201ENST00000612624 GTPBP6O43824 516 aaPredicted RBP11.55□□□□□ -0.56
SMIM11B-201ENST00000612624 BCL11BQ9C0K0 894 aaPredicted RBP11.55□□□□□ -0.56
SMIM11B-201ENST00000612624 NALCNQ8IZF0 1738 aa11.55□□□□□ -0.56
SMIM11B-201ENST00000612624 PRKAR2AP13861 404 aaKnown RBP11.54□□□□□ -0.56
SMIM11B-201ENST00000612624 RGL3Q3MIN7 710 aa11.54□□□□□ -0.56
SMIM11B-201ENST00000612624 STK24Q9Y6E0 443 aa11.54□□□□□ -0.56
SMIM11B-201ENST00000612624 RGPD1P0DJD0 1748 aa11.54□□□□□ -0.56
SMIM11B-201ENST00000612624 KCNQ2O43526 872 aa11.53□□□□□ -0.56
SMIM11B-201ENST00000612624 FXR2P51116 673 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMIM11B-201ENST00000612624 EZH2Q15910 746 aaKnown RBP11.53□□□□□ -0.56
SMIM11B-201ENST00000612624 PPP1R1BQ9UD71 204 aaPredicted RBP11.53□□□□□ -0.56
SMIM11B-201ENST00000612624 ADGRB2O60241 1585 aa11.53□□□□□ -0.56
SMIM11B-201ENST00000612624 NRXN1Q9ULB1 1477 aa11.52□□□□□ -0.56
SMIM11B-201ENST00000612624 ZNF326Q5BKZ1 582 aaKnown RBP11.52□□□□□ -0.57
SMIM11B-201ENST00000612624 ADGRF5Q8IZF2 1346 aa11.52□□□□□ -0.57
SMIM11B-201ENST00000612624 USP32Q8NFA0 1604 aa11.52□□□□□ -0.57
SMIM11B-201ENST00000612624 NEUROD1Q13562 356 aa11.51□□□□□ -0.57
SMIM11B-201ENST00000612624 SPATA31A3Q5VYP0 1347 aa11.51□□□□□ -0.57
SMIM11B-201ENST00000612624 TRPM1Q7Z4N2 1603 aa11.5□□□□□ -0.57
SMIM11B-201ENST00000612624 NBPF8Q3BBV2 869 aa11.5□□□□□ -0.57
SMIM11B-201ENST00000612624 NBPF14Q5TI25 921 aa11.5□□□□□ -0.57
SMIM11B-201ENST00000612624 NWD2Q9ULI1 1742 aa11.49□□□□□ -0.57
SMIM11B-201ENST00000612624 ZNF467Q7Z7K2 595 aaPredicted RBP11.49□□□□□ -0.57
SMIM11B-201ENST00000612624 PIK3C2GO75747 1445 aa11.49□□□□□ -0.57
SMIM11B-201ENST00000612624 KIAA1210Q9ULL0 1709 aa11.49□□□□□ -0.57
SMIM11B-201ENST00000612624 FOXO3O43524 673 aa11.48□□□□□ -0.57
SMIM11B-201ENST00000612624 ROBO2Q9HCK4 1378 aa11.48□□□□□ -0.57
SMIM11B-201ENST00000612624 TNS1Q9HBL0 1735 aaKnown RBP11.48□□□□□ -0.57
SMIM11B-201ENST00000612624 KNDC1Q76NI1 1749 aa11.47□□□□□ -0.57
SMIM11B-201ENST00000612624 CDC42BPGQ6DT37 1551 aa11.47□□□□□ -0.57
SMIM11B-201ENST00000612624 GIGYF1O75420 1035 aaPredicted RBP11.47□□□□□ -0.57
SMIM11B-201ENST00000612624 ESCO1Q5FWF5 840 aa11.47□□□□□ -0.57
SMIM11B-201ENST00000612624 L3MBTL2Q969R5 705 aa11.47□□□□□ -0.57
SMIM11B-201ENST00000612624 CCDC61Q9Y6R9 512 aa11.47□□□□□ -0.57
SMIM11B-201ENST00000612624 RPGRIP1LQ68CZ1 1315 aa11.46□□□□□ -0.57
SMIM11B-201ENST00000612624 FAM98CQ17RN3 349 aaKnown RBP11.46□□□□□ -0.57
SMIM11B-201ENST00000612624 FAM196AQ6ZSG2 479 aa11.46□□□□□ -0.57
SMIM11B-201ENST00000612624 CCDC9Q9Y3X0 531 aaKnown RBP11.46□□□□□ -0.57
SMIM11B-201ENST00000612624 ADGRB1O14514 1584 aa11.45□□□□□ -0.58
SMIM11B-201ENST00000612624 CCER1Q8TC90 406 aaPredicted RBP11.45□□□□□ -0.58
SMIM11B-201ENST00000612624 DCAF11Q8TEB1 546 aa11.45□□□□□ -0.58
SMIM11B-201ENST00000612624 RYDENQ9NUL5 291 aaKnown RBP11.45□□□□□ -0.58
SMIM11B-201ENST00000612624 ARHGEF28Q8N1W1 1705 aaKnown RBP11.45□□□□□ -0.58
SMIM11B-201ENST00000612624 RREB1Q92766 1687 aa11.43□□□□□ -0.58
SMIM11B-201ENST00000612624 A0A0G2JS52 829 aa11.43□□□□□ -0.58
SMIM11B-201ENST00000612624 APBA3O96018 575 aa11.43□□□□□ -0.58
SMIM11B-201ENST00000612624 MYT1Q01538 1121 aa11.43□□□□□ -0.58
SMIM11B-201ENST00000612624 THSD7AQ9UPZ6 1657 aa11.43□□□□□ -0.58
SMIM11B-201ENST00000612624 SPATA31A5Q5VU36 1347 aa11.42□□□□□ -0.58
SMIM11B-201ENST00000612624 SPATA31A7Q8IWB4 1347 aa11.42□□□□□ -0.58
SMIM11B-201ENST00000612624 XPCQ01831 940 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms