RNA–Protein interactions for RNA: ENST00000612349.1

SMAD6-205, Transcript of SMAD family member 6, humanhuman

Gene SMAD6, Length 5,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-205ENST00000612349 PCMTD1Q96MG8 357 aaPredicted RBP25.12■■□□□ 1.61
SMAD6-205ENST00000612349 CDK13Q14004 1512 aaKnown RBP25.11■■□□□ 1.61
SMAD6-205ENST00000612349 BRMS1Q9HCU9 246 aa25.11■■□□□ 1.61
SMAD6-205ENST00000612349 SART3Q15020 963 aaKnown RBP25.1■■□□□ 1.61
SMAD6-205ENST00000612349 EXOSC9Q06265 439 aaKnown RBP25.1■■□□□ 1.61
SMAD6-205ENST00000612349 RBM42Q9BTD8 480 aaKnown RBP25.1■■□□□ 1.61
SMAD6-205ENST00000612349 LAMC3Q9Y6N6 1575 aa25.09■■□□□ 1.61
SMAD6-205ENST00000612349 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.09■■□□□ 1.61
SMAD6-205ENST00000612349 HSP90AA2PQ14568 343 aaPredicted RBP25.09■■□□□ 1.61
SMAD6-205ENST00000612349 CT47B1P0C2W7 299 aaPredicted RBP25.09■■□□□ 1.61
SMAD6-205ENST00000612349 PDE3AQ14432 1141 aa25.08■■□□□ 1.61
SMAD6-205ENST00000612349 SLC26A8Q96RN1 970 aa25.08■■□□□ 1.61
SMAD6-205ENST00000612349 CWC22Q9HCG8 908 aaKnown RBP25.08■■□□□ 1.61
SMAD6-205ENST00000612349 RTEL1-TNFRSF6BF6WH68 1400 aa25.08■■□□□ 1.61
SMAD6-205ENST00000612349 ARID3AQ99856 593 aa25.08■■□□□ 1.61
SMAD6-205ENST00000612349 HDGFL1Q5TGJ6 251 aa25.08■■□□□ 1.6
SMAD6-205ENST00000612349 ANO8Q9HCE9 1232 aaPredicted RBP25.08■■□□□ 1.6
SMAD6-205ENST00000612349 STRN4Q9NRL3 753 aa25.08■■□□□ 1.6
SMAD6-205ENST00000612349 ATAD2Q6PL18 1390 aa25.08■■□□□ 1.6
SMAD6-205ENST00000612349 SULT6B1Q6IMI4 303 aa25.07■■□□□ 1.6
SMAD6-205ENST00000612349 SPG7Q9UQ90 795 aa25.07■■□□□ 1.6
SMAD6-205ENST00000612349 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.07■■□□□ 1.6
SMAD6-205ENST00000612349 ERBINQ96RT1 1412 aa25.07■■□□□ 1.6
SMAD6-205ENST00000612349 GNAI2P04899 355 aa25.07■■□□□ 1.6
SMAD6-205ENST00000612349 SASS6Q6UVJ0 657 aa25.07■■□□□ 1.6
SMAD6-205ENST00000612349 IQGAP2Q13576 1575 aa25.06■■□□□ 1.6
SMAD6-205ENST00000612349 BICRAQ9NZM4 1560 aa25.06■■□□□ 1.6
SMAD6-205ENST00000612349 KLHL34Q8N239 644 aa25.06■■□□□ 1.6
SMAD6-205ENST00000612349 GCC1Q96CN9 775 aa25.06■■□□□ 1.6
SMAD6-205ENST00000612349 CDCA7LQ96GN5 454 aa25.06■■□□□ 1.6
SMAD6-205ENST00000612349 SUPT6HQ7KZ85 1726 aaKnown RBP25.06■■□□□ 1.6
SMAD6-205ENST00000612349 ZNF530Q6P9A1 599 aaPredicted RBP25.05■■□□□ 1.6
SMAD6-205ENST00000612349 CCT4P50991 539 aaKnown RBP25.04■■□□□ 1.6
SMAD6-205ENST00000612349 TOM1L2Q6ZVM7 507 aa25.04■■□□□ 1.6
SMAD6-205ENST00000612349 CABP4P57796 275 aa25.03■■□□□ 1.6
SMAD6-205ENST00000612349 CCAR2Q8N163 923 aaKnown RBP25.03■■□□□ 1.6
SMAD6-205ENST00000612349 SLC3A2P08195 630 aaKnown RBP25.03■■□□□ 1.6
SMAD6-205ENST00000612349 GNL3LQ9NVN8 582 aaKnown RBP25.03■■□□□ 1.6
SMAD6-205ENST00000612349 MAGI1Q96QZ7 1491 aaPredicted RBP25.03■■□□□ 1.6
SMAD6-205ENST00000612349 MCM2P49736 904 aa25.02■■□□□ 1.6
SMAD6-205ENST00000612349 FYB1O15117 783 aa25.02■■□□□ 1.6
SMAD6-205ENST00000612349 WDR63Q8IWG1 891 aa25.02■■□□□ 1.6
SMAD6-205ENST00000612349 ARHGEF11O15085 1522 aa25.02■■□□□ 1.6
SMAD6-205ENST00000612349 NAIPQ13075 1403 aa25.02■■□□□ 1.6
SMAD6-205ENST00000612349 GPS2Q13227 327 aa25.01■■□□□ 1.59
SMAD6-205ENST00000612349 SLC4A2P04920 1241 aa25.01■■□□□ 1.59
SMAD6-205ENST00000612349 CCDC158Q5M9N0 1113 aa25■■□□□ 1.59
SMAD6-205ENST00000612349 PDCP20941 246 aa24.99■■□□□ 1.59
SMAD6-205ENST00000612349 PHF23Q9BUL5 403 aaPredicted RBP24.99■■□□□ 1.59
SMAD6-205ENST00000612349 CCDC141Q6ZP82 1450 aa24.99■■□□□ 1.59
SMAD6-205ENST00000612349 PRDM11Q9NQV5 511 aa24.99■■□□□ 1.59
SMAD6-205ENST00000612349 SRCIN1Q9C0H9 1055 aa24.99■■□□□ 1.59
SMAD6-205ENST00000612349 HMGB2P26583 209 aaKnown RBP24.99■■□□□ 1.59
SMAD6-205ENST00000612349 CNNM1Q9NRU3 951 aa24.99■■□□□ 1.59
SMAD6-205ENST00000612349 FAM177BA6PVY3 158 aa24.98■■□□□ 1.59
SMAD6-205ENST00000612349 PLB1Q6P1J6 1458 aa24.98■■□□□ 1.59
SMAD6-205ENST00000612349 DNAJC2Q99543 621 aaKnown RBP24.98■■□□□ 1.59
SMAD6-205ENST00000612349 CD109Q6YHK3 1445 aa24.97■■□□□ 1.59
SMAD6-205ENST00000612349 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.96■■□□□ 1.59
SMAD6-205ENST00000612349 ZNF428Q96B54 188 aa24.96■■□□□ 1.59
SMAD6-205ENST00000612349 SAMD1Q6SPF0 538 aaPredicted RBP24.96■■□□□ 1.59
SMAD6-205ENST00000612349 NAT10Q9H0A0 1025 aaKnown RBP24.96■■□□□ 1.59
SMAD6-205ENST00000612349 GRIN2AQ12879 1464 aa24.95■■□□□ 1.58
SMAD6-205ENST00000612349 DCAF8L1A6NGE4 600 aa24.95■■□□□ 1.58
SMAD6-205ENST00000612349 CCDC61Q9Y6R9 512 aa24.95■■□□□ 1.58
SMAD6-205ENST00000612349 IKQ13123 557 aaPredicted RBP24.94■■□□□ 1.58
SMAD6-205ENST00000612349 HOMER1Q86YM7 354 aa24.94■■□□□ 1.58
SMAD6-205ENST00000612349 DDX54Q8TDD1 881 aaKnown RBP24.94■■□□□ 1.58
SMAD6-205ENST00000612349 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.94■■□□□ 1.58
SMAD6-205ENST00000612349 SDF4Q9BRK5 362 aa24.94■■□□□ 1.58
SMAD6-205ENST00000612349 NOB1Q9ULX3 412 aaKnown RBP24.94■■□□□ 1.58
SMAD6-205ENST00000612349 SF3B2Q13435 895 aaKnown RBP24.93■■□□□ 1.58
SMAD6-205ENST00000612349 R3HCC1Q9Y3T6 440 aaKnown RBP24.93■■□□□ 1.58
SMAD6-205ENST00000612349 FCHSD2O94868 740 aa24.93■■□□□ 1.58
SMAD6-205ENST00000612349 TNNT3P45378 269 aaPredicted RBP24.93■■□□□ 1.58
SMAD6-205ENST00000612349 OLFM4Q6UX06 510 aa24.93■■□□□ 1.58
SMAD6-205ENST00000612349 RABEP1Q15276 862 aa24.93■■□□□ 1.58
SMAD6-205ENST00000612349 FOSBP53539 338 aa24.93■■□□□ 1.58
SMAD6-205ENST00000612349 TTC39AQ5SRH9 613 aa24.93■■□□□ 1.58
SMAD6-205ENST00000612349 TSR2Q969E8 191 aaKnown RBP24.92■■□□□ 1.58
SMAD6-205ENST00000612349 PDZRN3Q9UPQ7 1066 aa24.92■■□□□ 1.58
SMAD6-205ENST00000612349 VSIG10Q8N0Z9 540 aa24.92■■□□□ 1.58
SMAD6-205ENST00000612349 KCNH5Q8NCM2 988 aa24.91■■□□□ 1.58
SMAD6-205ENST00000612349 NEK4P51957 841 aa24.9■■□□□ 1.58
SMAD6-205ENST00000612349 NACAP1Q9BZK3 213 aa24.9■■□□□ 1.58
SMAD6-205ENST00000612349 ZNF592Q92610 1267 aa24.9■■□□□ 1.58
SMAD6-205ENST00000612349 CUL7Q14999 1698 aa24.9■■□□□ 1.58
SMAD6-205ENST00000612349 PCF11O94913 1555 aaKnown RBP24.9■■□□□ 1.58
SMAD6-205ENST00000612349 ATF7IPQ6VMQ6 1270 aa24.89■■□□□ 1.58
SMAD6-205ENST00000612349 LRRCC1Q9C099 1032 aa24.89■■□□□ 1.58
SMAD6-205ENST00000612349 CAMSAP2Q08AD1 1489 aa24.88■■□□□ 1.57
SMAD6-205ENST00000612349 MBD3O95983 291 aa24.88■■□□□ 1.57
SMAD6-205ENST00000612349 ZSCAN25Q6NSZ9 544 aa24.88■■□□□ 1.57
SMAD6-205ENST00000612349 CCDC57Q2TAC2 916 aa24.87■■□□□ 1.57
SMAD6-205ENST00000612349 MPHOSPH8Q99549 860 aa24.87■■□□□ 1.57
SMAD6-205ENST00000612349 NUDT16Q96DE0 195 aaKnown RBP24.87■■□□□ 1.57
SMAD6-205ENST00000612349 ABCC5O15440 1437 aa24.87■■□□□ 1.57
SMAD6-205ENST00000612349 NUTM2BA6NNL0 878 aaPredicted RBP24.86■■□□□ 1.57
SMAD6-205ENST00000612349 NUTM2EB1AL46 878 aaPredicted RBP24.86■■□□□ 1.57
SMAD6-205ENST00000612349 NUTM2AQ8IVF1 878 aaPredicted RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms