RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 RAPGEF4Q8WZA2 1011 aa11.44□□□□□ -0.58
SRGAP2B-204ENST00000612199 EHBP1L1Q8N3D4 1523 aa11.44□□□□□ -0.58
SRGAP2B-204ENST00000612199 TSR2Q969E8 191 aaKnown RBP11.44□□□□□ -0.58
SRGAP2B-204ENST00000612199 SLC26A8Q96RN1 970 aa11.44□□□□□ -0.58
SRGAP2B-204ENST00000612199 HMGXB3Q12766 1538 aa11.44□□□□□ -0.58
SRGAP2B-204ENST00000612199 ATP2B2Q01814 1243 aa11.44□□□□□ -0.58
SRGAP2B-204ENST00000612199 ESCO1Q5FWF5 840 aa11.43□□□□□ -0.58
SRGAP2B-204ENST00000612199 DDX49Q9Y6V7 483 aaKnown RBP11.43□□□□□ -0.58
SRGAP2B-204ENST00000612199 NUTM2BA6NNL0 878 aaPredicted RBP11.43□□□□□ -0.58
SRGAP2B-204ENST00000612199 NUTM2EB1AL46 878 aaPredicted RBP11.43□□□□□ -0.58
SRGAP2B-204ENST00000612199 NUTM2AQ8IVF1 878 aaPredicted RBP11.43□□□□□ -0.58
SRGAP2B-204ENST00000612199 CIZ1Q9ULV3 898 aaPredicted RBP11.43□□□□□ -0.58
SRGAP2B-204ENST00000612199 EPS15P42566 896 aa11.43□□□□□ -0.58
SRGAP2B-204ENST00000612199 ROCK1Q13464 1354 aa11.43□□□□□ -0.58
SRGAP2B-204ENST00000612199 DAPK1P53355 1430 aa11.42□□□□□ -0.58
SRGAP2B-204ENST00000612199 IFIT2P09913 472 aaKnown RBP11.42□□□□□ -0.58
SRGAP2B-204ENST00000612199 EXOSC9Q06265 439 aaKnown RBP11.42□□□□□ -0.58
SRGAP2B-204ENST00000612199 ANO2Q9NQ90 1003 aa11.42□□□□□ -0.58
SRGAP2B-204ENST00000612199 FAM177BA6PVY3 158 aa11.42□□□□□ -0.58
SRGAP2B-204ENST00000612199 RUFY2Q8WXA3 655 aa11.42□□□□□ -0.58
SRGAP2B-204ENST00000612199 CDK19Q9BWU1 502 aa11.42□□□□□ -0.58
SRGAP2B-204ENST00000612199 BCAR3O75815 825 aa11.42□□□□□ -0.58
SRGAP2B-204ENST00000612199 RBM5P52756 815 aaKnown RBP eCLIP11.42□□□□□ -0.58
SRGAP2B-204ENST00000612199 WDR97A6NE52 1622 aa11.41□□□□□ -0.58
SRGAP2B-204ENST00000612199 BCL11BQ9C0K0 894 aaPredicted RBP11.41□□□□□ -0.58
SRGAP2B-204ENST00000612199 RSPH6AQ9H0K4 717 aa11.41□□□□□ -0.58
SRGAP2B-204ENST00000612199 CHMP5Q9NZZ3 219 aa11.41□□□□□ -0.58
SRGAP2B-204ENST00000612199 CCDC27Q2M243 656 aa11.41□□□□□ -0.58
SRGAP2B-204ENST00000612199 C1orf115Q9H7X2 142 aa11.41□□□□□ -0.58
SRGAP2B-204ENST00000612199 DNMBPQ6XZF7 1577 aa11.4□□□□□ -0.58
SRGAP2B-204ENST00000612199 AKNAQ7Z591 1439 aa11.4□□□□□ -0.58
SRGAP2B-204ENST00000612199 H3BQV1 296 aa11.4□□□□□ -0.58
SRGAP2B-204ENST00000612199 DDX58O95786 925 aaKnown RBP11.4□□□□□ -0.58
SRGAP2B-204ENST00000612199 ZKSCAN1P17029 563 aaPredicted RBP11.4□□□□□ -0.58
SRGAP2B-204ENST00000612199 IFFO2Q5TF58 517 aa11.4□□□□□ -0.58
SRGAP2B-204ENST00000612199 EPRSP07814 1512 aaKnown RBP11.4□□□□□ -0.58
SRGAP2B-204ENST00000612199 LRRFIP1Q32MZ4 808 aaKnown RBP11.4□□□□□ -0.58
SRGAP2B-204ENST00000612199 ARHGEF11O15085 1522 aa11.4□□□□□ -0.59
SRGAP2B-204ENST00000612199 VTI1AQ96AJ9 217 aa11.4□□□□□ -0.59
SRGAP2B-204ENST00000612199 PNISRQ8TF01 805 aaKnown RBP11.39□□□□□ -0.59
SRGAP2B-204ENST00000612199 MAP7D2Q96T17 732 aa11.39□□□□□ -0.59
SRGAP2B-204ENST00000612199 NAIPQ13075 1403 aa11.39□□□□□ -0.59
SRGAP2B-204ENST00000612199 G3BP1Q13283 466 aaKnown RBP eCLIP11.39□□□□□ -0.59
SRGAP2B-204ENST00000612199 RIC3Q7Z5B4 369 aa11.39□□□□□ -0.59
SRGAP2B-204ENST00000612199 FAM184AQ8NB25 1140 aa11.39□□□□□ -0.59
SRGAP2B-204ENST00000612199 MCTP1Q6DN14 999 aa11.39□□□□□ -0.59
SRGAP2B-204ENST00000612199 SULT6B1Q6IMI4 303 aa11.39□□□□□ -0.59
SRGAP2B-204ENST00000612199 IL27Q8NEV9 243 aa11.39□□□□□ -0.59
SRGAP2B-204ENST00000612199 HECW1Q76N89 1606 aa11.39□□□□□ -0.59
SRGAP2B-204ENST00000612199 PDIA4P13667 645 aaKnown RBP11.38□□□□□ -0.59
SRGAP2B-204ENST00000612199 ZNF710Q8N1W2 664 aa11.38□□□□□ -0.59
SRGAP2B-204ENST00000612199 PLB1Q6P1J6 1458 aa11.38□□□□□ -0.59
SRGAP2B-204ENST00000612199 HOMER2Q9NSB8 354 aa11.38□□□□□ -0.59
SRGAP2B-204ENST00000612199 HSP90AB4PQ58FF6 505 aa11.38□□□□□ -0.59
SRGAP2B-204ENST00000612199 PROSER2Q86WR7 435 aaPredicted RBP11.38□□□□□ -0.59
SRGAP2B-204ENST00000612199 RRS1Q15050 365 aaKnown RBP11.37□□□□□ -0.59
SRGAP2B-204ENST00000612199 C11orf95C9JLR9 678 aaPredicted RBP11.37□□□□□ -0.59
SRGAP2B-204ENST00000612199 WDHD1O75717 1129 aaPredicted RBP11.37□□□□□ -0.59
SRGAP2B-204ENST00000612199 NEUROD6Q96NK8 337 aa11.37□□□□□ -0.59
SRGAP2B-204ENST00000612199 ERBINQ96RT1 1412 aa11.37□□□□□ -0.59
SRGAP2B-204ENST00000612199 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.37□□□□□ -0.59
SRGAP2B-204ENST00000612199 CPLX2Q6PUV4 134 aaKnown RBP11.36□□□□□ -0.59
SRGAP2B-204ENST00000612199 UBTFL1P0CB47 393 aaPredicted RBP11.36□□□□□ -0.59
SRGAP2B-204ENST00000612199 SUPT6HQ7KZ85 1726 aaKnown RBP11.36□□□□□ -0.59
SRGAP2B-204ENST00000612199 TWISTNBQ3B726 338 aaPredicted RBP11.36□□□□□ -0.59
SRGAP2B-204ENST00000612199 BICRAQ9NZM4 1560 aa11.36□□□□□ -0.59
SRGAP2B-204ENST00000612199 KIAA0586Q9BVV6 1533 aa11.36□□□□□ -0.59
SRGAP2B-204ENST00000612199 XPCQ01831 940 aaPredicted RBP11.36□□□□□ -0.59
SRGAP2B-204ENST00000612199 INTS3Q68E01 1043 aaKnown RBP11.36□□□□□ -0.59
SRGAP2B-204ENST00000612199 COMMD10Q9Y6G5 202 aa11.36□□□□□ -0.59
SRGAP2B-204ENST00000612199 PCF11O94913 1555 aaKnown RBP11.36□□□□□ -0.59
SRGAP2B-204ENST00000612199 FOSBP53539 338 aa11.36□□□□□ -0.59
SRGAP2B-204ENST00000612199 SCLT1Q96NL6 688 aa11.36□□□□□ -0.59
SRGAP2B-204ENST00000612199 C22orf23Q9BZE7 217 aa11.35□□□□□ -0.59
SRGAP2B-204ENST00000612199 SLC52A1Q9NWF4 448 aa11.35□□□□□ -0.59
SRGAP2B-204ENST00000612199 STRN4Q9NRL3 753 aa11.35□□□□□ -0.59
SRGAP2B-204ENST00000612199 NOB1Q9ULX3 412 aaKnown RBP11.35□□□□□ -0.59
SRGAP2B-204ENST00000612199 SART3Q15020 963 aaKnown RBP11.35□□□□□ -0.59
SRGAP2B-204ENST00000612199 NUCB2P80303 420 aa11.35□□□□□ -0.59
SRGAP2B-204ENST00000612199 SYNE3Q6ZMZ3 975 aa11.35□□□□□ -0.59
SRGAP2B-204ENST00000612199 PDE3AQ14432 1141 aa11.35□□□□□ -0.59
SRGAP2B-204ENST00000612199 CCDC70Q6NSX1 233 aa11.35□□□□□ -0.59
SRGAP2B-204ENST00000612199 ABCA10Q8WWZ4 1543 aa11.35□□□□□ -0.59
SRGAP2B-204ENST00000612199 MRPS9P82933 396 aaKnown RBP11.34□□□□□ -0.59
SRGAP2B-204ENST00000612199 RNF20Q5VTR2 975 aa11.34□□□□□ -0.59
SRGAP2B-204ENST00000612199 GPRASP1Q5JY77 1395 aa11.34□□□□□ -0.59
SRGAP2B-204ENST00000612199 WAPLQ7Z5K2 1190 aa11.34□□□□□ -0.59
SRGAP2B-204ENST00000612199 SURF6O75683 361 aaKnown RBP11.33□□□□□ -0.59
SRGAP2B-204ENST00000612199 SLC4A2P04920 1241 aa11.33□□□□□ -0.6
SRGAP2B-204ENST00000612199 PLEKHH2Q8IVE3 1493 aa11.33□□□□□ -0.6
SRGAP2B-204ENST00000612199 THEMISQ8N1K5 641 aaPredicted RBP11.33□□□□□ -0.6
SRGAP2B-204ENST00000612199 BECN2A8MW95 431 aa11.33□□□□□ -0.6
SRGAP2B-204ENST00000612199 DDX23Q9BUQ8 820 aaKnown RBP11.33□□□□□ -0.6
SRGAP2B-204ENST00000612199 PDZRN3Q9UPQ7 1066 aa11.33□□□□□ -0.6
SRGAP2B-204ENST00000612199 IQGAP2Q13576 1575 aa11.33□□□□□ -0.6
SRGAP2B-204ENST00000612199 VPS37CA5D8V6 355 aaPredicted RBP11.33□□□□□ -0.6
SRGAP2B-204ENST00000612199 GAS2L2Q8NHY3 880 aa11.32□□□□□ -0.6
SRGAP2B-204ENST00000612199 GOLGA6L19H0YKK7 550 aa11.32□□□□□ -0.6
SRGAP2B-204ENST00000612199 ERC2O15083 957 aa11.32□□□□□ -0.6
SRGAP2B-204ENST00000612199 CDC45O75419 566 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms