RNA–Protein interactions for RNA: ENST00000612195.4

TVP23A-210, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TVP23A, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-210ENST00000612195 NRAPQ86VF7 1730 aa24.48■■□□□ 1.51
TVP23A-210ENST00000612195 A0A0G2JS52 829 aa24.47■■□□□ 1.51
TVP23A-210ENST00000612195 PAK3O75914 559 aaPredicted RBP24.47■■□□□ 1.51
TVP23A-210ENST00000612195 MYT1Q01538 1121 aa24.47■■□□□ 1.51
TVP23A-210ENST00000612195 FAM98CQ17RN3 349 aaKnown RBP24.46■■□□□ 1.51
TVP23A-210ENST00000612195 COL14A1Q05707 1796 aaKnown RBP24.46■■□□□ 1.51
TVP23A-210ENST00000612195 ARHGEF28Q8N1W1 1705 aaKnown RBP24.46■■□□□ 1.51
TVP23A-210ENST00000612195 NUDT16Q96DE0 195 aaKnown RBP24.45■■□□□ 1.5
TVP23A-210ENST00000612195 ATP7BP35670 1465 aa24.43■■□□□ 1.5
TVP23A-210ENST00000612195 CRYBG1Q9Y4K1 1723 aa24.42■■□□□ 1.5
TVP23A-210ENST00000612195 ITSN1Q15811 1721 aa24.41■■□□□ 1.5
TVP23A-210ENST00000612195 CDK19Q9BWU1 502 aa24.41■■□□□ 1.5
TVP23A-210ENST00000612195 PRDM11Q9NQV5 511 aa24.41■■□□□ 1.5
TVP23A-210ENST00000612195 SPATA31A5Q5VU36 1347 aa24.39■■□□□ 1.5
TVP23A-210ENST00000612195 SPATA31A7Q8IWB4 1347 aa24.39■■□□□ 1.5
TVP23A-210ENST00000612195 FAM182BQ5T319 152 aa24.36■■□□□ 1.49
TVP23A-210ENST00000612195 KIAA0232Q92628 1395 aa24.36■■□□□ 1.49
TVP23A-210ENST00000612195 BAG6P46379 1132 aa24.35■■□□□ 1.49
TVP23A-210ENST00000612195 NUTM2GQ5VZR2 741 aa24.35■■□□□ 1.49
TVP23A-210ENST00000612195 CHRNA2Q15822 529 aa24.34■■□□□ 1.49
TVP23A-210ENST00000612195 NBPF8Q3BBV2 869 aa24.34■■□□□ 1.49
TVP23A-210ENST00000612195 CCDC61Q9Y6R9 512 aa24.34■■□□□ 1.49
TVP23A-210ENST00000612195 ACEP12821 1306 aa24.34■■□□□ 1.49
TVP23A-210ENST00000612195 NBPF1Q3BBV0 1214 aa24.33■■□□□ 1.49
TVP23A-210ENST00000612195 KIAA1210Q9ULL0 1709 aa24.32■■□□□ 1.48
TVP23A-210ENST00000612195 POLR3AO14802 1390 aaPredicted RBP24.32■■□□□ 1.48
TVP23A-210ENST00000612195 ZC3H6P61129 1189 aaKnown RBP24.32■■□□□ 1.48
TVP23A-210ENST00000612195 PHRF1Q9P1Y6 1649 aaKnown RBP24.32■■□□□ 1.48
TVP23A-210ENST00000612195 TOPAZ1Q8N9V7 1692 aa24.31■■□□□ 1.48
TVP23A-210ENST00000612195 THSD7AQ9UPZ6 1657 aa24.31■■□□□ 1.48
TVP23A-210ENST00000612195 PLEKHG3A1L390 1219 aa24.31■■□□□ 1.48
TVP23A-210ENST00000612195 STRN4Q9NRL3 753 aa24.31■■□□□ 1.48
TVP23A-210ENST00000612195 SPATA31A1Q5TZJ5 1347 aa24.31■■□□□ 1.48
TVP23A-210ENST00000612195 EN1Q05925 392 aaPredicted RBP24.29■■□□□ 1.48
TVP23A-210ENST00000612195 PSDA5PKW4 1024 aaPredicted RBP24.28■■□□□ 1.48
TVP23A-210ENST00000612195 RGPD1P0DJD0 1748 aa24.27■■□□□ 1.48
TVP23A-210ENST00000612195 ABTB2Q8N961 1025 aa24.27■■□□□ 1.48
TVP23A-210ENST00000612195 EVA1CP58658 441 aa24.25■■□□□ 1.47
TVP23A-210ENST00000612195 SRPK2P78362 688 aaKnown RBP24.24■■□□□ 1.47
TVP23A-210ENST00000612195 USP35Q9P2H5 1018 aa24.24■■□□□ 1.47
TVP23A-210ENST00000612195 CENPJQ9HC77 1338 aaPredicted RBP24.23■■□□□ 1.47
TVP23A-210ENST00000612195 CABP2Q9NPB3 220 aa24.22■■□□□ 1.47
TVP23A-210ENST00000612195 TNS1Q9HBL0 1735 aaKnown RBP24.21■■□□□ 1.47
TVP23A-210ENST00000612195 LRP5O75197 1615 aa24.21■■□□□ 1.47
TVP23A-210ENST00000612195 NRKQ7Z2Y5 1582 aa24.21■■□□□ 1.47
TVP23A-210ENST00000612195 PPIP5K1Q6PFW1 1433 aa24.21■■□□□ 1.47
TVP23A-210ENST00000612195 FAM196AQ6ZSG2 479 aa24.21■■□□□ 1.47
TVP23A-210ENST00000612195 CAMTA1Q9Y6Y1 1673 aa24.21■■□□□ 1.47
TVP23A-210ENST00000612195 SSH2Q76I76 1423 aa24.2■■□□□ 1.46
TVP23A-210ENST00000612195 USP19O94966 1318 aa24.2■■□□□ 1.46
TVP23A-210ENST00000612195 LARP1Q6PKG0 1096 aaKnown RBP24.2■■□□□ 1.46
TVP23A-210ENST00000612195 DISP2A7MBM2 1401 aa24.19■■□□□ 1.46
TVP23A-210ENST00000612195 CPDO75976 1380 aa24.19■■□□□ 1.46
TVP23A-210ENST00000612195 TRIM37O94972 964 aa24.19■■□□□ 1.46
TVP23A-210ENST00000612195 BARGINQ6ZT62 677 aa24.19■■□□□ 1.46
TVP23A-210ENST00000612195 NLRP13Q86W25 1043 aa24.19■■□□□ 1.46
TVP23A-210ENST00000612195 EZH2Q15910 746 aaKnown RBP24.18■■□□□ 1.46
TVP23A-210ENST00000612195 GCP02774 474 aa24.17■■□□□ 1.46
TVP23A-210ENST00000612195 R3HDM1Q15032 1099 aaKnown RBP24.17■■□□□ 1.46
TVP23A-210ENST00000612195 LMO7Q8WWI1 1683 aa24.16■■□□□ 1.46
TVP23A-210ENST00000612195 PDE3BQ13370 1112 aa24.16■■□□□ 1.46
TVP23A-210ENST00000612195 CABP1Q9NZU7 370 aa24.16■■□□□ 1.46
TVP23A-210ENST00000612195 QRICH2Q9H0J4 1663 aa24.15■■□□□ 1.46
TVP23A-210ENST00000612195 TCP11L2Q8N4U5 519 aa24.15■■□□□ 1.46
TVP23A-210ENST00000612195 L3MBTL2Q969R5 705 aa24.15■■□□□ 1.46
TVP23A-210ENST00000612195 CAMKK2Q96RR4 588 aa24.15■■□□□ 1.46
TVP23A-210ENST00000612195 APBA3O96018 575 aa24.14■■□□□ 1.45
TVP23A-210ENST00000612195 BRD4O60885 1362 aaPredicted RBP24.13■■□□□ 1.45
TVP23A-210ENST00000612195 NLRP6P59044 892 aa24.11■■□□□ 1.45
TVP23A-210ENST00000612195 USP6P35125 1406 aa24.1■■□□□ 1.45
TVP23A-210ENST00000612195 ZBTB7CA1YPR0 619 aa24.1■■□□□ 1.45
TVP23A-210ENST00000612195 THRAP3Q9Y2W1 955 aaKnown RBP24.1■■□□□ 1.45
TVP23A-210ENST00000612195 COL5A2P05997 1499 aaPredicted RBP24.1■■□□□ 1.45
TVP23A-210ENST00000612195 SIN3AQ96ST3 1273 aa24.08■■□□□ 1.45
TVP23A-210ENST00000612195 PARD3Q8TEW0 1356 aa24.07■■□□□ 1.44
TVP23A-210ENST00000612195 EVC2Q86UK5 1308 aa24.07■■□□□ 1.44
TVP23A-210ENST00000612195 AATKQ6ZMQ8 1374 aa24.05■■□□□ 1.44
TVP23A-210ENST00000612195 CRB1P82279 1406 aa24.05■■□□□ 1.44
TVP23A-210ENST00000612195 SLIT3O75094 1523 aa24.05■■□□□ 1.44
TVP23A-210ENST00000612195 PARP4Q9UKK3 1724 aaKnown RBP24.04■■□□□ 1.44
TVP23A-210ENST00000612195 TRPM1Q7Z4N2 1603 aa24.04■■□□□ 1.44
TVP23A-210ENST00000612195 NEUROD1Q13562 356 aa24.03■■□□□ 1.44
TVP23A-210ENST00000612195 PIK3C2AO00443 1686 aa24.02■■□□□ 1.44
TVP23A-210ENST00000612195 RREB1Q92766 1687 aa24.02■■□□□ 1.44
TVP23A-210ENST00000612195 TOM1L2Q6ZVM7 507 aa24■■□□□ 1.43
TVP23A-210ENST00000612195 AXIN2Q9Y2T1 843 aa24■■□□□ 1.43
TVP23A-210ENST00000612195 COL18A1P39060 1754 aa24■■□□□ 1.43
TVP23A-210ENST00000612195 ROCK2O75116 1388 aaKnown RBP24■■□□□ 1.43
TVP23A-210ENST00000612195 NUP188Q5SRE5 1749 aa23.99■■□□□ 1.43
TVP23A-210ENST00000612195 ZNF692Q9BU19 519 aaPredicted RBP23.99■■□□□ 1.43
TVP23A-210ENST00000612195 TTC21BQ7Z4L5 1316 aa23.99■■□□□ 1.43
TVP23A-210ENST00000612195 NBPF14Q5TI25 921 aa23.98■■□□□ 1.43
TVP23A-210ENST00000612195 C11orf95C9JLR9 678 aaPredicted RBP23.97■■□□□ 1.43
TVP23A-210ENST00000612195 DDB1Q16531 1140 aa23.97■■□□□ 1.43
TVP23A-210ENST00000612195 PEAK1Q9H792 1746 aa23.96■■□□□ 1.43
TVP23A-210ENST00000612195 OVOS2A0A0G2JMS6 1433 aa23.96■■□□□ 1.43
TVP23A-210ENST00000612195 OVOS2A0A0J9YW53 1432 aa23.96■■□□□ 1.43
TVP23A-210ENST00000612195 OVOS2Q6IE36 1432 aa23.96■■□□□ 1.43
TVP23A-210ENST00000612195 ARHGEF25Q86VW2 580 aa23.96■■□□□ 1.43
TVP23A-210ENST00000612195 AKAP12Q02952 1782 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms