RNA–Protein interactions for RNA: ENST00000611917.1

FAM228B-207, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 3

Gene FAM228B, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-207ENST00000611917 NUTM2GQ5VZR2 741 aa17.58■□□□□ 0.4
FAM228B-207ENST00000611917 CCER1Q8TC90 406 aaPredicted RBP17.58■□□□□ 0.4
FAM228B-207ENST00000611917 COL22A1Q8NFW1 1626 aaPredicted RBP17.58■□□□□ 0.4
FAM228B-207ENST00000611917 PPIP5K1Q6PFW1 1433 aa17.57■□□□□ 0.4
FAM228B-207ENST00000611917 ATP7BP35670 1465 aa17.56■□□□□ 0.4
FAM228B-207ENST00000611917 CDK12Q9NYV4 1490 aaPredicted RBP17.56■□□□□ 0.4
FAM228B-207ENST00000611917 VPS72Q15906 364 aa17.56■□□□□ 0.4
FAM228B-207ENST00000611917 PUS7Q96PZ0 661 aaKnown RBP17.56■□□□□ 0.4
FAM228B-207ENST00000611917 PRDM11Q9NQV5 511 aa17.56■□□□□ 0.4
FAM228B-207ENST00000611917 BTG4Q9NY30 223 aa17.56■□□□□ 0.4
FAM228B-207ENST00000611917 USP32Q8NFA0 1604 aa17.56■□□□□ 0.4
FAM228B-207ENST00000611917 BCL9LQ86UU0 1499 aa17.56■□□□□ 0.4
FAM228B-207ENST00000611917 NLRP6P59044 892 aa17.55■□□□□ 0.4
FAM228B-207ENST00000611917 TMC1Q8TDI8 760 aa17.54■□□□□ 0.4
FAM228B-207ENST00000611917 ATRNO75882 1429 aa17.54■□□□□ 0.4
FAM228B-207ENST00000611917 ATAD2Q6PL18 1390 aa17.53■□□□□ 0.4
FAM228B-207ENST00000611917 ST20-MTHFSA0A0A6YYL1 179 aa17.53■□□□□ 0.4
FAM228B-207ENST00000611917 EVA1CP58658 441 aa17.53■□□□□ 0.4
FAM228B-207ENST00000611917 ZC3H6P61129 1189 aaKnown RBP17.53■□□□□ 0.4
FAM228B-207ENST00000611917 UPF1Q92900 1129 aaKnown RBP eCLIP17.53■□□□□ 0.4
FAM228B-207ENST00000611917 TRPM1Q7Z4N2 1603 aa17.53■□□□□ 0.4
FAM228B-207ENST00000611917 HDGFL2Q7Z4V5 671 aaPredicted RBP17.52■□□□□ 0.4
FAM228B-207ENST00000611917 GCP02774 474 aa17.51■□□□□ 0.39
FAM228B-207ENST00000611917 SLIT2O94813 1529 aa17.51■□□□□ 0.39
FAM228B-207ENST00000611917 SBNO2Q9Y2G9 1366 aa17.51■□□□□ 0.39
FAM228B-207ENST00000611917 TERF2IPQ9NYB0 399 aa17.5■□□□□ 0.39
FAM228B-207ENST00000611917 RALGAPBQ86X10 1494 aa17.5■□□□□ 0.39
FAM228B-207ENST00000611917 ONECUT3O60422 494 aaPredicted RBP17.49■□□□□ 0.39
FAM228B-207ENST00000611917 TTC21BQ7Z4L5 1316 aa17.48■□□□□ 0.39
FAM228B-207ENST00000611917 TMF1P82094 1093 aa17.48■□□□□ 0.39
FAM228B-207ENST00000611917 CDCA8Q53HL2 280 aa17.48■□□□□ 0.39
FAM228B-207ENST00000611917 SEPT12Q8IYM1 358 aa17.48■□□□□ 0.39
FAM228B-207ENST00000611917 TTC21AQ8NDW8 1320 aa17.47■□□□□ 0.39
FAM228B-207ENST00000611917 ITSN1Q15811 1721 aa17.47■□□□□ 0.39
FAM228B-207ENST00000611917 CHRNA2Q15822 529 aa17.47■□□□□ 0.39
FAM228B-207ENST00000611917 CCDC125Q86Z20 511 aa17.47■□□□□ 0.39
FAM228B-207ENST00000611917 KCNH5Q8NCM2 988 aa17.47■□□□□ 0.39
FAM228B-207ENST00000611917 SLC12A5Q9H2X9 1139 aa17.47■□□□□ 0.39
FAM228B-207ENST00000611917 KTN1Q86UP2 1357 aaKnown RBP17.46■□□□□ 0.39
FAM228B-207ENST00000611917 KIAA0232Q92628 1395 aa17.46■□□□□ 0.39
FAM228B-207ENST00000611917 A0A0G2JS52 829 aa17.46■□□□□ 0.39
FAM228B-207ENST00000611917 MYT1Q01538 1121 aa17.46■□□□□ 0.39
FAM228B-207ENST00000611917 STRN4Q9NRL3 753 aa17.46■□□□□ 0.39
FAM228B-207ENST00000611917 TESK2Q96S53 571 aa17.45■□□□□ 0.38
FAM228B-207ENST00000611917 USP6P35125 1406 aa17.45■□□□□ 0.38
FAM228B-207ENST00000611917 ZBTB7CA1YPR0 619 aa17.44■□□□□ 0.38
FAM228B-207ENST00000611917 QRICH2Q9H0J4 1663 aa17.44■□□□□ 0.38
FAM228B-207ENST00000611917 RGS12O14924 1447 aa17.44■□□□□ 0.38
FAM228B-207ENST00000611917 FAM98CQ17RN3 349 aaKnown RBP17.43■□□□□ 0.38
FAM228B-207ENST00000611917 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.43■□□□□ 0.38
FAM228B-207ENST00000611917 TRPM3Q9HCF6 1732 aaPredicted RBP17.43■□□□□ 0.38
FAM228B-207ENST00000611917 USP19O94966 1318 aa17.43■□□□□ 0.38
FAM228B-207ENST00000611917 KRT27Q7Z3Y8 459 aa17.42■□□□□ 0.38
FAM228B-207ENST00000611917 SPATA31A5Q5VU36 1347 aa17.42■□□□□ 0.38
FAM228B-207ENST00000611917 SPATA31A7Q8IWB4 1347 aa17.42■□□□□ 0.38
FAM228B-207ENST00000611917 ALS2Q96Q42 1657 aa17.41■□□□□ 0.38
FAM228B-207ENST00000611917 CPDO75976 1380 aa17.4■□□□□ 0.38
FAM228B-207ENST00000611917 CPSF1Q10570 1443 aaKnown RBP17.4■□□□□ 0.38
FAM228B-207ENST00000611917 SF3B2Q13435 895 aaKnown RBP17.4■□□□□ 0.38
FAM228B-207ENST00000611917 MARF1Q9Y4F3 1742 aaKnown RBP17.4■□□□□ 0.38
FAM228B-207ENST00000611917 SSH2Q76I76 1423 aa17.39■□□□□ 0.38
FAM228B-207ENST00000611917 USP47Q96K76 1375 aa17.39■□□□□ 0.37
FAM228B-207ENST00000611917 USP35Q9P2H5 1018 aa17.38■□□□□ 0.37
FAM228B-207ENST00000611917 NINLQ9Y2I6 1382 aa17.38■□□□□ 0.37
FAM228B-207ENST00000611917 TOPAZ1Q8N9V7 1692 aa17.37■□□□□ 0.37
FAM228B-207ENST00000611917 SOX12O15370 315 aa17.37■□□□□ 0.37
FAM228B-207ENST00000611917 ARHGEF25Q86VW2 580 aa17.37■□□□□ 0.37
FAM228B-207ENST00000611917 THRAP3Q9Y2W1 955 aaKnown RBP17.37■□□□□ 0.37
FAM228B-207ENST00000611917 SPATA31A1Q5TZJ5 1347 aa17.37■□□□□ 0.37
FAM228B-207ENST00000611917 EIF4G2P78344 907 aaKnown RBP eCLIP17.36■□□□□ 0.37
FAM228B-207ENST00000611917 LARP1Q6PKG0 1096 aaKnown RBP17.36■□□□□ 0.37
FAM228B-207ENST00000611917 TCP11L2Q8N4U5 519 aa17.36■□□□□ 0.37
FAM228B-207ENST00000611917 AATKQ6ZMQ8 1374 aa17.36■□□□□ 0.37
FAM228B-207ENST00000611917 COL14A1Q05707 1796 aaKnown RBP17.35■□□□□ 0.37
FAM228B-207ENST00000611917 PDE3BQ13370 1112 aa17.35■□□□□ 0.37
FAM228B-207ENST00000611917 BARGINQ6ZT62 677 aa17.35■□□□□ 0.37
FAM228B-207ENST00000611917 NME9Q86XW9 330 aa17.35■□□□□ 0.37
FAM228B-207ENST00000611917 CSB-PGBD3P0DP91 1061 aa17.34■□□□□ 0.37
FAM228B-207ENST00000611917 TOM1L2Q6ZVM7 507 aa17.34■□□□□ 0.37
FAM228B-207ENST00000611917 NWD2Q9ULI1 1742 aa17.33■□□□□ 0.37
FAM228B-207ENST00000611917 USP31Q70CQ4 1352 aa17.33■□□□□ 0.36
FAM228B-207ENST00000611917 COG3Q96JB2 828 aa17.33■□□□□ 0.36
FAM228B-207ENST00000611917 ZRANB1Q9UGI0 708 aa17.33■□□□□ 0.36
FAM228B-207ENST00000611917 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.33■□□□□ 0.36
FAM228B-207ENST00000611917 EDC4Q6P2E9 1401 aaKnown RBP17.31■□□□□ 0.36
FAM228B-207ENST00000611917 FAM196AQ6ZSG2 479 aa17.31■□□□□ 0.36
FAM228B-207ENST00000611917 AXIN2Q9Y2T1 843 aa17.31■□□□□ 0.36
FAM228B-207ENST00000611917 C11orf95C9JLR9 678 aaPredicted RBP17.3■□□□□ 0.36
FAM228B-207ENST00000611917 CDCA7Q9BWT1 371 aaPredicted RBP17.3■□□□□ 0.36
FAM228B-207ENST00000611917 GLI3P10071 1580 aa17.3■□□□□ 0.36
FAM228B-207ENST00000611917 POLR3GLQ9BT43 218 aa17.29■□□□□ 0.36
FAM228B-207ENST00000611917 A0A1W2PP64 1363 aa17.28■□□□□ 0.36
FAM228B-207ENST00000611917 CARD10Q9BWT7 1032 aa17.28■□□□□ 0.36
FAM228B-207ENST00000611917 ABCA3Q99758 1704 aa17.27■□□□□ 0.36
FAM228B-207ENST00000611917 WDR17Q8IZU2 1322 aa17.27■□□□□ 0.36
FAM228B-207ENST00000611917 PLCH1Q4KWH8 1693 aa17.27■□□□□ 0.36
FAM228B-207ENST00000611917 CAMTA1Q9Y6Y1 1673 aa17.27■□□□□ 0.36
FAM228B-207ENST00000611917 ANKRD36BQ8N2N9 1353 aa17.27■□□□□ 0.35
FAM228B-207ENST00000611917 CD163L1Q9NR16 1453 aa17.26■□□□□ 0.35
FAM228B-207ENST00000611917 HSPA5P11021 654 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms