RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 TTC21AQ8NDW8 1320 aa10.46□□□□□ -0.73
CBWD1-219ENST00000611457 SLC26A8Q96RN1 970 aa10.46□□□□□ -0.73
CBWD1-219ENST00000611457 AATKQ6ZMQ8 1374 aa10.46□□□□□ -0.74
CBWD1-219ENST00000611457 WASLO00401 505 aaPredicted RBP10.46□□□□□ -0.74
CBWD1-219ENST00000611457 TRIM52Q96A61 297 aa10.46□□□□□ -0.74
CBWD1-219ENST00000611457 NPC1L1Q9UHC9 1359 aa10.45□□□□□ -0.74
CBWD1-219ENST00000611457 ATF3P18847 181 aa10.45□□□□□ -0.74
CBWD1-219ENST00000611457 PCGF6Q9BYE7 350 aa10.45□□□□□ -0.74
CBWD1-219ENST00000611457 SIPA1L3O60292 1781 aaPredicted RBP10.44□□□□□ -0.74
CBWD1-219ENST00000611457 BLMP54132 1417 aaPredicted RBP10.44□□□□□ -0.74
CBWD1-219ENST00000611457 PRR36Q9H6K5 1346 aa10.44□□□□□ -0.74
CBWD1-219ENST00000611457 NSD2O96028 1365 aa10.43□□□□□ -0.74
CBWD1-219ENST00000611457 C11orf95C9JLR9 678 aaPredicted RBP10.42□□□□□ -0.74
CBWD1-219ENST00000611457 RGS12O14924 1447 aa10.42□□□□□ -0.74
CBWD1-219ENST00000611457 ZNF326Q5BKZ1 582 aaKnown RBP10.41□□□□□ -0.74
CBWD1-219ENST00000611457 RGS17Q9UGC6 210 aaPredicted RBP10.41□□□□□ -0.74
CBWD1-219ENST00000611457 PPIP5K1Q6PFW1 1433 aa10.41□□□□□ -0.74
CBWD1-219ENST00000611457 CENPJQ9HC77 1338 aaPredicted RBP10.41□□□□□ -0.74
CBWD1-219ENST00000611457 INSRP06213 1382 aa10.41□□□□□ -0.74
CBWD1-219ENST00000611457 PSME1Q06323 249 aa10.41□□□□□ -0.74
CBWD1-219ENST00000611457 ZNF772Q68DY9 489 aaPredicted RBP10.41□□□□□ -0.74
CBWD1-219ENST00000611457 PPARGC1BQ86YN6 1023 aaKnown RBP10.4□□□□□ -0.74
CBWD1-219ENST00000611457 ANKRD36BQ8N2N9 1353 aa10.4□□□□□ -0.74
CBWD1-219ENST00000611457 C5P01031 1676 aa10.4□□□□□ -0.74
CBWD1-219ENST00000611457 CFAP70Q5T0N1 1121 aa10.4□□□□□ -0.74
CBWD1-219ENST00000611457 COL5A2P05997 1499 aaPredicted RBP10.39□□□□□ -0.75
CBWD1-219ENST00000611457 UBR2Q8IWV8 1755 aa10.39□□□□□ -0.75
CBWD1-219ENST00000611457 PARD3Q8TEW0 1356 aa10.39□□□□□ -0.75
CBWD1-219ENST00000611457 TESK2Q96S53 571 aa10.38□□□□□ -0.75
CBWD1-219ENST00000611457 PLPPR3Q6T4P5 718 aa10.38□□□□□ -0.75
CBWD1-219ENST00000611457 COL5A3P25940 1745 aaPredicted RBP10.38□□□□□ -0.75
CBWD1-219ENST00000611457 TAF1LQ8IZX4 1826 aa10.38□□□□□ -0.75
CBWD1-219ENST00000611457 L3MBTL2Q969R5 705 aa10.37□□□□□ -0.75
CBWD1-219ENST00000611457 ZNF692Q9BU19 519 aaPredicted RBP10.37□□□□□ -0.75
CBWD1-219ENST00000611457 MAP2P11137 1827 aaKnown RBP10.36□□□□□ -0.75
CBWD1-219ENST00000611457 ROCK2O75116 1388 aaKnown RBP10.36□□□□□ -0.75
CBWD1-219ENST00000611457 SOCS7O14512 581 aa10.36□□□□□ -0.75
CBWD1-219ENST00000611457 EVC2Q86UK5 1308 aa10.36□□□□□ -0.75
CBWD1-219ENST00000611457 PHF8Q9UPP1 1060 aa10.36□□□□□ -0.75
CBWD1-219ENST00000611457 TOGARAM1Q9Y4F4 1720 aa10.36□□□□□ -0.75
CBWD1-219ENST00000611457 SCN11AQ9UI33 1791 aa10.35□□□□□ -0.75
CBWD1-219ENST00000611457 RGPD2P0DJD1 1756 aa10.35□□□□□ -0.75
CBWD1-219ENST00000611457 THRAP3Q9Y2W1 955 aaKnown RBP10.35□□□□□ -0.75
CBWD1-219ENST00000611457 MRC1P22897 1456 aa10.35□□□□□ -0.75
CBWD1-219ENST00000611457 VPS72Q15906 364 aa10.35□□□□□ -0.75
CBWD1-219ENST00000611457 PRAM1Q96QH2 718 aa10.35□□□□□ -0.75
CBWD1-219ENST00000611457 KIF13BQ9NQT8 1826 aa10.34□□□□□ -0.75
CBWD1-219ENST00000611457 FOXD1Q16676 465 aa10.34□□□□□ -0.75
CBWD1-219ENST00000611457 TUBGCP6Q96RT7 1819 aa10.34□□□□□ -0.75
CBWD1-219ENST00000611457 BARGINQ6ZT62 677 aa10.34□□□□□ -0.75
CBWD1-219ENST00000611457 CCDC125Q86Z20 511 aa10.34□□□□□ -0.75
CBWD1-219ENST00000611457 CCDC61Q9Y6R9 512 aa10.33□□□□□ -0.76
CBWD1-219ENST00000611457 DCAF11Q8TEB1 546 aa10.33□□□□□ -0.76
CBWD1-219ENST00000611457 ITGB4P16144 1822 aa10.33□□□□□ -0.76
CBWD1-219ENST00000611457 NBPF8Q3BBV2 869 aa10.33□□□□□ -0.76
CBWD1-219ENST00000611457 TONSLQ96HA7 1378 aa10.32□□□□□ -0.76
CBWD1-219ENST00000611457 ZEB1P37275 1124 aaPredicted RBP10.32□□□□□ -0.76
CBWD1-219ENST00000611457 ITGAEP38570 1179 aa10.32□□□□□ -0.76
CBWD1-219ENST00000611457 DOT1LQ8TEK3 1739 aa10.31□□□□□ -0.76
CBWD1-219ENST00000611457 OVOS2A0A0G2JMS6 1433 aa10.31□□□□□ -0.76
CBWD1-219ENST00000611457 TNS2Q63HR2 1409 aa10.31□□□□□ -0.76
CBWD1-219ENST00000611457 BTAF1O14981 1849 aa10.31□□□□□ -0.76
CBWD1-219ENST00000611457 COL3A1P02461 1466 aaPredicted RBP10.31□□□□□ -0.76
CBWD1-219ENST00000611457 CRB1P82279 1406 aa10.3□□□□□ -0.76
CBWD1-219ENST00000611457 CCDC7Q96M83 1385 aa10.3□□□□□ -0.76
CBWD1-219ENST00000611457 NUDT16Q96DE0 195 aaKnown RBP10.3□□□□□ -0.76
CBWD1-219ENST00000611457 USP47Q96K76 1375 aa10.29□□□□□ -0.76
CBWD1-219ENST00000611457 CHGAP10645 457 aaKnown RBP10.28□□□□□ -0.76
CBWD1-219ENST00000611457 LAMB4A4D0S4 1761 aa10.28□□□□□ -0.76
CBWD1-219ENST00000611457 CDK19Q9BWU1 502 aa10.28□□□□□ -0.76
CBWD1-219ENST00000611457 SPATA31A5Q5VU36 1347 aa10.28□□□□□ -0.76
CBWD1-219ENST00000611457 SPATA31A7Q8IWB4 1347 aa10.28□□□□□ -0.76
CBWD1-219ENST00000611457 CDCA8Q53HL2 280 aa10.27□□□□□ -0.76
CBWD1-219ENST00000611457 KRT28Q7Z3Y7 464 aa10.27□□□□□ -0.76
CBWD1-219ENST00000611457 WAPLQ7Z5K2 1190 aa10.27□□□□□ -0.76
CBWD1-219ENST00000611457 RBM6P78332 1123 aaKnown RBP10.27□□□□□ -0.77
CBWD1-219ENST00000611457 CDCA7Q9BWT1 371 aaPredicted RBP10.27□□□□□ -0.77
CBWD1-219ENST00000611457 A0A1W2PP64 1363 aa10.26□□□□□ -0.77
CBWD1-219ENST00000611457 ARFGEF2Q9Y6D5 1785 aa10.26□□□□□ -0.77
CBWD1-219ENST00000611457 ORAI2Q96SN7 254 aa10.26□□□□□ -0.77
CBWD1-219ENST00000611457 TRPC5Q9UL62 973 aaPredicted RBP10.26□□□□□ -0.77
CBWD1-219ENST00000611457 UNC5CLQ8IV45 518 aa10.25□□□□□ -0.77
CBWD1-219ENST00000611457 WASHC2AQ641Q2 1341 aa10.25□□□□□ -0.77
CBWD1-219ENST00000611457 DLEC1Q9Y238 1755 aa10.25□□□□□ -0.77
CBWD1-219ENST00000611457 NBPF1Q3BBV0 1214 aa10.25□□□□□ -0.77
CBWD1-219ENST00000611457 NRXN2Q9P2S2 1712 aa10.25□□□□□ -0.77
CBWD1-219ENST00000611457 ACEP12821 1306 aa10.24□□□□□ -0.77
CBWD1-219ENST00000611457 KIAA1551Q9HCM1 1747 aa10.24□□□□□ -0.77
CBWD1-219ENST00000611457 TMEM132EQ6IEE7 984 aa10.24□□□□□ -0.77
CBWD1-219ENST00000611457 KCNH5Q8NCM2 988 aa10.24□□□□□ -0.77
CBWD1-219ENST00000611457 TJP1Q07157 1748 aa10.24□□□□□ -0.77
CBWD1-219ENST00000611457 DISP3Q9P2K9 1392 aa10.24□□□□□ -0.77
CBWD1-219ENST00000611457 BCORQ6W2J9 1755 aa10.23□□□□□ -0.77
CBWD1-219ENST00000611457 KDM3BQ7LBC6 1761 aa10.23□□□□□ -0.77
CBWD1-219ENST00000611457 CGNL1Q0VF96 1302 aa10.23□□□□□ -0.77
CBWD1-219ENST00000611457 TTC21BQ7Z4L5 1316 aa10.23□□□□□ -0.77
CBWD1-219ENST00000611457 AFF2P51816 1311 aa10.22□□□□□ -0.77
CBWD1-219ENST00000611457 SPATA31A1Q5TZJ5 1347 aa10.22□□□□□ -0.77
CBWD1-219ENST00000611457 KTN1Q86UP2 1357 aaKnown RBP10.22□□□□□ -0.77
CBWD1-219ENST00000611457 UBR3Q6ZT12 1888 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms